Basic Information

Gene Symbol
kn
Assembly
GCA_028551675.1
Location
JAPWLS010000076.1:4356-12735[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-142 2.2e-138 462.1 0.0 180 387 1 231 1 236 0.99
2 2 1.1e-08 3.8e-05 22.2 1.5 420 469 240 291 232 311 0.83

Sequence Information

Coding Sequence
ATGGACAGGTTTTTCTTGAAATTTTTCTTGAAGTGCAATCAAAATTGTTTGAAAAATGCTGGCAATCCTCGTGATATGAGAAGATTCCAGGTGGTAATATCGACCCAGGTGATGGTAGACGGGCCTCTTCTTGCGATATCAGATAACATGTTCGTCCATAACAATAGCAAGCATGGACGAAGAGCGAAACGACTGGATCCCACTGAAGGTACAGACGCGGTCGTCATCAACGCAAACATTTCACCCACTTCTGGATTATATCCGCCGTTGCCTGTAGCTACGCCGTGTATTAAAGCAATATCTCCCAGTGAAGGTTGGACATCTGGAGGTTCAACGGTCATTATCGTTGGCGATAATTTCTTTGACGGACTTCAAGTTGTTTTTGGGACAATGCTCGTTTGGAGCGAGTTAATCACTTCACATGCAATTCGTGTTCAAACACCGCCGAGACACATCCCTGGGGTTGTGGAGGTAACGCTGTCATATAAAAGTAAGCAGTTTTGTAAAGGCGCACCTGGAAGatttgtttacgtttCAGCTCTTAACGAGCCGACGATAGATTTTGGCTTCCAGAGATTACAGAAACTAATACCGAGACATCCTGGAGATCCTGAAAAATTACCTAAGGAAATAATATTAAAACGAGCAGCAGACTTGGCCGAGGCATTATATTCGATGCCCCGAAATAACCAATTGGGTCTCGGAGCACCAAGATCACCGCCAGCGAGCATGCCGTTCAATTCATATACTGGACAATTAGCTGTCAGTGTTCAGGATGCTGCTGCTTCACAATGGACTGAAGAAGAATACGCGCGCAGTGGTGGTTCAGTGTCGCCGCGGTATTGTTCAGCCGCGTCCACACCTCATGCCGCTCCCGCTGCCGCTTCTGCATCGTATCCGCACCCGCAGCATTACCCAGCTCCGCCGACCTCACTCTTCAATACATCTTCTCTGCCGCTAGGTCCGTACCACCCCGTCAACTTGAATGCCCAGTTATCTGACCATCAGTATAACACGTATAACACGAAAGATAGCAGTTATTACAGTGAAAGAAACGCGGCATCAAAGAACGAATGTCCAGTAAACACTCATCTAAAATGCAATGACGTCATGAAAGGGCAGGATAGAATGGGAGGTCTCGTGTCGTCCCCATTTAGTATGAATCCATTTTCGTTGCCGACATGTAACGCTCAACAATATGCACAAACCGCTCCGCTAGCCTCCAAGTAA
Protein Sequence
MDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAVVINANISPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDFGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDAAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAASASYPHPQHYPAPPTSLFNTSSLPLGPYHPVNLNAQLSDHQYNTYNTKDSSYYSERNAASKNECPVNTHLKCNDVMKGQDRMGGLVSSPFSMNPFSLPTCNAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01041525;
90% Identity
iTF_01452123;
80% Identity
-