Basic Information

Gene Symbol
Arid2
Assembly
GCA_028551675.1
Location
JAPWLS010000972.1:125851-151204[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-20 2.9e-17 62.8 0.0 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGTCTAAATTTCAAATAAATACGAAATCCAGCAACTATACAAAGGATAAGGAAGCTTTTCTGAAAGAACTGAAACAGTTTAATGATAGTAAAAGTATACCATACAAAGTTCCTGTTGTAAATGGCGTGCTTGTAGATTTATATTTATTTTATACGTTGGTACAACAACGCGGTGGTATTAGTAAGGTAAACCAGACAGATGCCTGGGACTCGTTTTTAAGGCCACTAAGATTGCCACATCCGTGTATTAATGGATCAACTTTATTAAGAAAAATATATGCTACATATCTGGAAAAATATGAAAGGGCGAAAGGTCCACCGGGTCGTGATGATGATAATGATATGGAAGAGGACTTCAGACTGCGCACTCGGGGCGGAGGCAGTGGTGCTATGCCAAGAGTCACTTTTAGTGGCGCTTATATTACTGAACCAGCTCGCTCAGGTCCTCGTCACGGCGGTCCCTCCGAACGTCTGGCTCTGTCACTCTTGTCTCCGATGCCAAATGAGCAGGATTTTGCAGTGAATGTATGCACCGTGTTAGCGGCTGATCACTCCAATCGTCTGCCTTTGTCGTCCACTCCACATATATTGGATTTCTTACTAGCACATGCTGGTGTCTATAACCATTCTAGTCTCAGAGAAACAATAGGTCGTTCATATTATGAAGTACGAGGTTCATATCCGGACGAATTCTGGAGAAAGAAAGCTGGAGGCGGTGGAGCTCGAGAGTTAGCAGATGAGACTCAATTCACAGCTCCTGGACTGGAGCACCCAGAGCTCATAGTTCAGGCGCTCGCTGCTGAAAACACTTTGAAAGACTGTCTGACCTTAGAAGGGAATATGGAGGAGTATTTGGACAAAATTTTGTATCAACCGGATTCAGAAGAATGGGTGACCGATCCTTCTGATGATGAAGATCTGTTTGCGCAAGATCTCCCGGGCGGTGCTAAGTGTGTGTACACCCAGCGAGTGCTGCAAGTGGCGTCTATAGTCAGGTCTCTATCGTTTCACGAAGAAAATGTGCAAATTCTGGCTAAAAACACCACTTTGATTAGGTTTTTATTGCTCTGTGCAAATAGTTGGGTCGGTACACTCCGTCAGTCCGGATTGGATACACTCGGGAATGTGTGCACTGAGCTTGTGATAAAGGAGCCGGCTACATGTTTAATAACTCGGCACATATTGTCAACAATACAATCATCGTTGGAGTCGCCCGATCGCGCCAGAGTGCTCGCTGCTTTGGAATTATTGAATAAGTTAGCGCAGAATGAAAATAATGAGGATGTGCTGCTTAAGAATTTGGAGCCCAAGATGTACAGCGAAGTGTGCTCCTTTCTGAGTCTCCGTGATATAATGCTGTTGGTGTCCAGTCTAGAATGCGTGTACGCACTGACTGGGCTGGGAGAGAGAGCCGCCGAGACTGTCGCCAAAGTGCCTGGTGCTATCAACACTCTTGTCTCATTGGTCACTGTTGAGGCGCAGAGTTATGGCCCGCGTGCGTGTATATTGATGCGTGTGGTCGAAACTGTTTGCGGCCCGAGTGTTCCGCAGCAAGCTGAAGAGCAACCACAACCTGCTGCCACTACACAGGCTCAAACTCAGCCGCAAGTGACCCCCACCAAGACGGAGGCTCGTCCGCAAAGCACGACCAATGCGACTTCATCGCCGCTCACCATACAACAGTCTCACTTGCAGCAGCAGCAAATACTGGAAAATGAACAATTCGCTCTAGCATGGTTGAGAGCATCGTTTGAACCTTTGCCGGTGAATAACAACGCGGGTGTCGACGCCGGTGAAGTTTACAGGCAGTATTTGGCGCTGTGCTCCAAACTCAATAGGAAGGGATTGATTGCGCCTGCGCACTTTCCAAGATTAGTTCGTACCATATTTGGTGGAACTGTTGGTCCGAACAACGTGACTATATCGACGGGTGAAACGCAGCAAATGTACATTGGTATCAAGTCAAGGAACACACCGAATTCAAGGACTACTCAGGCACCAGCCGGTCCATCGTCGCCGATTTTGAAGGCTCAATTGACAAATAAAACTGGGATTTCTGATAATAAACAAACTGCTAACACTTCACAGGTGACGTCACAACATAACGCTGCATTGTCGCAAGCGTTGGAGACATCGAATCCCAACTCGACCACATTAATAAAACATTTGTTAGCGAATAAAGTAAGCCCAGTAGCACACGCAGGCATGCAAGTTGCTCAAAGACAACAGAATCAGCAGCGTGTTATTCAACAACCAACTGTCGTGGCGCAACAAGGTGGCAACGTTATGGAATTAGATCCAGAGGCGCTCATTAAATGTTCGACAATAACGCCTGGCGGTGTTGCCAGCAGTACACCTATGCAGGATAAGGTCGCCTCGGTTATTCCAACTACAGTGGAAGAAGCAATCAAGGATGAAATGCAGTTTCAATTGGACGAGCAGACGCAGTTGACTATTAAATCAGCCCAAAACAAAATGCTAGCAGATCTACTCGAGAAGAAATCCAACCCACCTGTGCAAGTGGTACAAGTGAACCAGCAAATCAATCCGCCGACCATTCAGATCACGGAGTCGGGACAGATCGTTCAGGTGAAACCGGAGTCTGTGGTCCAGTTCAACGAGGCCGGACAGTTTATACAGATCAAGAATGAACCGTTCTCGAGTCAAGTTATAGTCAAGACGGAGATCGAAGATGAAGATCCTGCTAATAAAAAAATTAAGCTCGAGGAGAAAAGAGAGAAATCACCGCAAGAGAGCGTCTCTAAGACTGCAGCTAACCTCTATGCAGCTCTTGCGGCTTCAGCGCTTGAAGATGAAGAAGATTTGATTCAACAGACATCTGTACAGATCCAACAACCTACGCTACAAGTGCAGACGCCGACGTTACAAGTGCAACAGCCGATGCTGCAGGTGCAGCCGATGGATGTCCAAATGCAGAATATATTGACATCGCAAGGTGGACAACTTATATTACAAGAAAAACAAATGGGCACTCCGCAAACGCAATTCGTTCAGCAACCGATGCAAATTATTACAGCGCCTAACACATCGCAAGCTGGCCTAAATTACATAGCACAGAATCTGCAAGGAATGCAACAACATAAAACTATCATTATAGTCCAAGGTCCGACTGGCGGTGGGCCTATCACACTTACAGTGAACAATACGGCCGGTCTTGACGAATGCACACTGAACAGTGTGATAACGCAAGCGACGGAGGCAATCACCCAACAGCAAATTATACAGAATTCTGGGGTTATCCAATCAACGCAGAGGGTTATAGTTAGCCAACCATCGATCACGAATACGGCGCCGCCGATTATTGTTAATAATTTAACACAGAATACGCCGCAATTAACAGCGAGTCAGCAACCGATAATAAGCTCCCAGCCGCAACCTCATAAAGCTCAGATTGTCAATCAACAACAAATCATGGTTGCACAAAAATCACAACCGACAATCATAACTTCGAATGGAAATCAACAAATACTGACTTCTGGCCAGCAACTCATTGCCGGCGGTCAGCAAATAATTACTGGCGGTCCACAAATTATAACTGGCGGTCCGCAAATTATTACTACCGGCCAGCAAATGTTGAGCGGTGGTCAGCAGATCATAACTAGTGGCCAGCTCGTGGCTGTGTCGGGGAGTCAGCAGATATTAGTCAATACTCCTATTAAGCAGAACATGAGGATGATGCAGCAGGCTAACACTAAGGTTGTGACGTCACAGGATAAACCTTCAGTCATTCAGAGCACCTCTGCTGTTGTAAGTAGTACAATTAAAAAGCAGCCAGCGATGCGTCAGGTGGTCACGCGTCAGCCCATAATGGTCGGTAGCACCAAGATAGGTGACAAGGAAGTTATTATACAGCAGCCCATCGAGACATCGCCACCACAAACCAAAAAACCCACGACTCCTAAGCAGCCATCTACTTCGCCCCAGAACACGATATCTCCAGATGACAACCCTTGGATCTGTCATTGGAGGGGTTGCGGGAAGTCGTTCGAGAGTGCCACGGCGGTGTTCAGCCATTGCGCGCGCATGCATGTGCCTGGTTCGTCCACGGGGGAGGCTGTGTGTCTGTGGGCGGAGTGCGACCGAGTGCCGCGAAAGACGTTCGCGCTGCTGAACCATCTGCACGACAGACATTGTACACCTGATGCTCTGAAGGCACTGTTTTTGACACGTCGCCGTTCCTCGAGCGAGGGAGAAGGCAGTAAGCCCGTCTCGCTCGGATATCCTCCGAACGCCGCGATGGCCGCGCTCAACAAACACGCCGTCGATTTTCTCAATCCGCGGGAACTCATGGATGAGAATGAAGGTCCAGTCACAAAGAGTATTAGGTTGACGGCGGCGCTTATTTTGAGAAATATTGTTATTTACTCGAACACTGGTCGAAGACATCTGCGTAGTTACGAAGCTCATTTGGCGACAATAGCTCTGAGTTCAGTGGAAGCGTCGCGTACTATCTCGCAAGTGCTCTACGATATGAACAATATTTGA
Protein Sequence
MSKFQINTKSSNYTKDKEAFLKELKQFNDSKSIPYKVPVVNGVLVDLYLFYTLVQQRGGISKVNQTDAWDSFLRPLRLPHPCINGSTLLRKIYATYLEKYERAKGPPGRDDDNDMEEDFRLRTRGGGSGAMPRVTFSGAYITEPARSGPRHGGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSSTPHILDFLLAHAGVYNHSSLRETIGRSYYEVRGSYPDEFWRKKAGGGGARELADETQFTAPGLEHPELIVQALAAENTLKDCLTLEGNMEEYLDKILYQPDSEEWVTDPSDDEDLFAQDLPGGAKCVYTQRVLQVASIVRSLSFHEENVQILAKNTTLIRFLLLCANSWVGTLRQSGLDTLGNVCTELVIKEPATCLITRHILSTIQSSLESPDRARVLAALELLNKLAQNENNEDVLLKNLEPKMYSEVCSFLSLRDIMLLVSSLECVYALTGLGERAAETVAKVPGAINTLVSLVTVEAQSYGPRACILMRVVETVCGPSVPQQAEEQPQPAATTQAQTQPQVTPTKTEARPQSTTNATSSPLTIQQSHLQQQQILENEQFALAWLRASFEPLPVNNNAGVDAGEVYRQYLALCSKLNRKGLIAPAHFPRLVRTIFGGTVGPNNVTISTGETQQMYIGIKSRNTPNSRTTQAPAGPSSPILKAQLTNKTGISDNKQTANTSQVTSQHNAALSQALETSNPNSTTLIKHLLANKVSPVAHAGMQVAQRQQNQQRVIQQPTVVAQQGGNVMELDPEALIKCSTITPGGVASSTPMQDKVASVIPTTVEEAIKDEMQFQLDEQTQLTIKSAQNKMLADLLEKKSNPPVQVVQVNQQINPPTIQITESGQIVQVKPESVVQFNEAGQFIQIKNEPFSSQVIVKTEIEDEDPANKKIKLEEKREKSPQESVSKTAANLYAALAASALEDEEDLIQQTSVQIQQPTLQVQTPTLQVQQPMLQVQPMDVQMQNILTSQGGQLILQEKQMGTPQTQFVQQPMQIITAPNTSQAGLNYIAQNLQGMQQHKTIIIVQGPTGGGPITLTVNNTAGLDECTLNSVITQATEAITQQQIIQNSGVIQSTQRVIVSQPSITNTAPPIIVNNLTQNTPQLTASQQPIISSQPQPHKAQIVNQQQIMVAQKSQPTIITSNGNQQILTSGQQLIAGGQQIITGGPQIITGGPQIITTGQQMLSGGQQIITSGQLVAVSGSQQILVNTPIKQNMRMMQQANTKVVTSQDKPSVIQSTSAVVSSTIKKQPAMRQVVTRQPIMVGSTKIGDKEVIIQQPIETSPPQTKKPTTPKQPSTSPQNTISPDDNPWICHWRGCGKSFESATAVFSHCARMHVPGSSTGEAVCLWAECDRVPRKTFALLNHLHDRHCTPDALKALFLTRRRSSSEGEGSKPVSLGYPPNAAMAALNKHAVDFLNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRHLRSYEAHLATIALSSVEASRTISQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451255;
90% Identity
-
80% Identity
-