Basic Information

Gene Symbol
Kdm5
Assembly
GCA_028551675.1
Location
JAPWLS010001599.1:280569-283043[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-22 1.1e-18 67.4 0.1 3 89 94 176 92 176 0.93

Sequence Information

Coding Sequence
ATGGATAGCAAAAAAATATTGAAGAGTGCGATGCAAAGTGCCCCGGAATTTACTTTCACGCCACCTCCGGAGGCACCCGTGTTCGAACCCACCGAAGAAGAGTTTCAAGATCCTTTGGTATATATCACTAAAATTCGTCCAGTAGCATCAAAAACGGGAATCTGTAAAATAAAGCCTCCTTCTGGATGGCAACCGCCGTTTTCTCTAGATGTCGATAAATTGAAATTCGTTCCTAGGATACAAAAATTAAATGAATTGGAAGCCATTACGCGATTGAAGCTATTGTTTTTAGACAAGATACTAAAATTTTGGCAACTGCAGGGACAAACACTAAAAATACCTATGATCGAAAATAAAGCATTGGATCTATACTGTTTGAAGTTTTGGGTGAATGAAGAAGGAGGCTTTACCGCTTGCGATCGGGGGAAAAAATGGCGTAAGATTGCTCATGCGATGGGGTACAGTCAGAACGCGAGCACGTTTAATTTTTTAAGAAGTAATTACGAGAAAATACTTTTGCCCTTTGATATATTCGAGAATAGTAAACCAAATGCGGCAAAAGCTGTGAAAAAGACTGAAATAAAATCAGAAGGGAAGGGAGACGCGGAGCCTTCTATCACAGAGGTTCCAGTAGAACTTATCAAGAACATGAAAGAGGAAGATGTGAAACCAAAAACAAATATAAGGAAAACAAAAACTGGATCTGATATTAAAGCTGCTACTGAAACTGTACTGAAGAAACAATCAGAAATTATAGAAATAAAAGATGAGACAGAAGAGCGTGAGCCAATTGTGACTAGAATTAAGACTAAGAACAGGGAATTAAGGAGACTAGCATGCTATGGTCCAGGCCCTAAGATGCCAGGACTCAATGATGAAGAGTTTGATATCACCAAATGCAGAAAAAGACCAAGGTTTGATGTTGATCCATTAGCTATATACTATTGCAGTGTGTGTCGTAAAGACCACTCTGATCATTTGTTACTGATATGTAATGGCTGTTCAGATACATATCACACATTCTGCCTGAAGCCACCTCTAAGCGTTGTGCCTGAGGGTGACTGGAGGTGTCCATGTTGCATTGCCGAAGAAGTCCACAAACCAGCAGAGGCATTCGGCTTTGCACAAGCAGAGAGAGAGTACACTCTGCAGCAATTTGGCGAAATGGCTGATAAATTTAAATCTGAATACTTCAACATGGCTCCACACTTAGTGCCAACAACGGTTGCTGAGAAAGAGTTTTGGAGGATCATATCGTCTGTTGATGATGATGTCACAGTGGAGTATGGTGCAGACCTTCATTCTATGGATCATGGCTCCGGTTTTCCTACTAAGTCTTCCATTAATTTACTCCCAGGTGATCAAGAATATGCAGATTCTGGATGGAATTTAAACAACTTACCTGTACTTGAAGGTTCTGTTTTAAGATTTATTAACGCTGATATATCTGGCATGACTGTACCGTGGATGTATGTTGGTATGTGCTTCTCTGCATTCTGCTGGCACAATGAAGATCACTGGAGTTATTCTATCAATTATTTGCATTGGGGTGAACCCAAGACTTGGTATGGCGTGCCAGGAAGCGGCGCCGAATCGCTCGAGAATGCAATGAAAGCTGCTGCACCAGATCTATTCAAGTCTCAACCAGATCTGTTACATCAACTTGTCACAATCATGAATCCTAACTTACTCATGGCTGCTGGTGTGCCTATATACAGAACTGATCAGAATGCTGGTGAGTTTGTGGTGACATTCCCTCGTGCCTACCATACTGGCTTCAATCAAGGGTACAACTTTGCTGAGGCAGTAAATTTTGCACCACCAGACTGGCTGCCTATAGGACATGAATGTATACTACATTATAAGAAACTAAAAAGATTTTGTGTCTTCTCACATGATGAACTTGTATGTAAAATGGCACTGGAGGGACATCATTTAGATCTAGCAACTGCATTGGAAATACAGAAGGAGTTGAGGCAGGCGATAGAAGAAGAAGAATTATTAAGAGATATTGTTGTCAAAAAAGGCTTGAAGAAGGTGGAGAGGACTGCCTTTGAACTGTTATTGGATGATGAACGTTTGTGTGAAGTGTGCAAGACTACATGCTTCTTGTCCTCGGTGTCATGCCCGAATTGCAAAAACATGTACTGTCTCCAGCACGCGTTGGAGTCCTGCGCATGCACCTTCTCAGCCAAAGTCTTAAAATATAGATATAACATGGAGGAACTGAGTCTTATGTTGGACACGATAGATCATAGAGTGAATGTGTTTAAAAAATGGTTAGAGAGCACTAGAAGCATATTGCTACCTAAAGCACCAGTCCTGGGACGACTGAAGGCATTGAAAGATCTCGTCGATGAGGCAGAAGAGTTAAAGCTACCAAATGGTCCCCTGTTGAGACAGCTTCGGGAGGAGTACACGAATGTGAAACAAAAGCCAGAGCCTATAATTATAGATTTATTAGATGATGATTGA
Protein Sequence
MDSKKILKSAMQSAPEFTFTPPPEAPVFEPTEEEFQDPLVYITKIRPVASKTGICKIKPPSGWQPPFSLDVDKLKFVPRIQKLNELEAITRLKLLFLDKILKFWQLQGQTLKIPMIENKALDLYCLKFWVNEEGGFTACDRGKKWRKIAHAMGYSQNASTFNFLRSNYEKILLPFDIFENSKPNAAKAVKKTEIKSEGKGDAEPSITEVPVELIKNMKEEDVKPKTNIRKTKTGSDIKAATETVLKKQSEIIEIKDETEEREPIVTRIKTKNRELRRLACYGPGPKMPGLNDEEFDITKCRKRPRFDVDPLAIYYCSVCRKDHSDHLLLICNGCSDTYHTFCLKPPLSVVPEGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSEYFNMAPHLVPTTVAEKEFWRIISSVDDDVTVEYGADLHSMDHGSGFPTKSSINLLPGDQEYADSGWNLNNLPVLEGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSGAESLENAMKAAAPDLFKSQPDLLHQLVTIMNPNLLMAAGVPIYRTDQNAGEFVVTFPRAYHTGFNQGYNFAEAVNFAPPDWLPIGHECILHYKKLKRFCVFSHDELVCKMALEGHHLDLATALEIQKELRQAIEEEELLRDIVVKKGLKKVERTAFELLLDDERLCEVCKTTCFLSSVSCPNCKNMYCLQHALESCACTFSAKVLKYRYNMEELSLMLDTIDHRVNVFKKWLESTRSILLPKAPVLGRLKALKDLVDEAEELKLPNGPLLRQLREEYTNVKQKPEPIIIDLLDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451253;
90% Identity
-
80% Identity
-