Basic Information

Gene Symbol
Arid4b
Assembly
GCA_028551675.1
Location
JAPWLS010001405.1:207589-218698[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-29 1.7e-26 92.4 0.1 1 89 283 369 283 369 0.96
2 2 7.9 1.3e+04 -3.3 0.0 27 81 800 854 785 855 0.57

Sequence Information

Coding Sequence
ATGCAGGCTGATGATCCTCCGTTCTTAACAGTGGGTACAGATGTCAGTGCCAAGTATAAAGGTGCTTTTTGTGAAGCAAAAATCAAGAAAGTTGTTAAAAATATTAGGTGTAGAGTTACTTTAAAAGTTGGTGGAGCAATAACTGTGGATGACGATGCAATAGTAAAGGGCAACCTTCGAATTGGCAACACTGTACAAGTCAAACAAGACCCTAAGAAGGACTCTGTTGAGGCTGTACTGAATAAAATACAAGATTGTAGCCAATATACTGTTGTATTTGACGATGGTGACATAACAACATTGCGGAGATCAGCACTCTGTTTAAAAAGTGGAAGACATTTTAATGAAAGTGAAACTTTAGACCAGCTGCCTCTGACGCATCCTGAACATTTCTCTACGCCCGTCATAGCTGGGAGAAGAGGTAGAAGGGGTAGAGCTCAATCTGAGGATAGCGAAGGTGATGCCCCAGTGAGGCCGAGAAAGACAGACAGTACAGAACGTGAGCCTCATGTAGGTAGAGTTGTTTTGGTAGACACAGCCAGTGGTACAGAGAGAAGAAGACCCCAGCCGCCAGCATTTCCAGCTCTCGTCGTTGCTCCGACAGCACAAATTAAAGTTAAAGAAGATTACCTTGTACGCTCATTTAAGGATGGAAGATACTACACAGTGCCTAAGAAGGAGGCCCGTGAGTTTCGTAAAGGCAGTGCGCCAGCTGATTGGGCTGGGGTGGATGCAGCATTACAATACATGAACAATAGTGTACTACCTCCACATTGGGACAGAGATACGTTGTTCAATGAACCGAGAAACACTTCAGACGATAGTTCCGACGATGAACCTCGTGAGGAAAAGGACCATTTCGTCGCTCAATTATACAAGTTTATGGACGATCGTGGTACGCCGCTTAATAGAAATCCAACTATCGCCAATAGAGATATTGATCTTTATCGATTGTTCAGGGTGGTGCAAAAACAGGGTGGTTATAATCGTGTGACGAACCAAAATCAATGGAAGTTAATTGCTGATAAAATGGGCTTCCATCCTGTCAATACAAGTATCACCAATCTATGCAAACAGGCTTATAAGAAATTTTTGCATAGCTTCGAAGATTTTTATCGTAAGTTAGGCGTAACATTAGTAGCGCATCCGAGAGGGGCCAGGACACCACCTGCTGGCCGGTCTCTTATACGTGATCGCGACAAGCAACTACCATCCTCTACAACTCCAACGCCTACTAATCAGAAAAGTAAAAGTGATAAGGATTCAGATAAAAGTGAAGCGGATAAGAGTGAAAAGGAAGACGGTAAACCTGAACCTAAAGTCGAGAAGGAAGTTAAAGAGAAAGAAAAAGAGAAGGAAAAGGAGAAAGAGAAAGAAAAATCTCGAAGTGATGAAGATGATAGTGCAGATAATCAACCATTAGCTGTTGTGCCCAAGATTGACAAGGAGAAAGAAAGGGAAAAAGAAAAGGAAAAGGAGAAGGAGAGAGATAAGGAAAAAGAGAGAGAGAAAGAAAAGCCTATTGAAGAAAAGGAGAAGGTTAAAATTCAGAAAAGTAGAATACCAGTATCTACAAAAATTGGTAAAGAAACACAAGAAAAACGGACTGCAAAACCTAGAAGATCATTATCTACTAGAGAAAAAGGTGATAGCAACGGCAGCACAAGCACTTCTCGTGTATCAAGTAGACCACAAGTGTCCACAGATAGTGACAGCTCTGGCCGAGCTTCCAGATGCGGTCTGAGTAAGAAAATGCAGAGCCGCCGCAGTCAGAGCGCCAATTCAGCGAGTAGCGGCAACACAATCGCCTCTAACAGTAGCAAACGGCCGAGAAAACGAAAAACTACTGAGCCATCTCAAGAAGAACACATGTTAAGAGGTCCAGGAAATATAAAAGCTTCGGTTGGTGACAAACTGCAAGTTTATTATGGACCAGCTCAATCTGAATCTAAGGTTACATACGAAGCTAAAGTTATAGAGATTTCCACTGAAGGATTACTGCGGGTTCACTATACTGGATGGAATACACGATACGATGAATGGATTAAGCCGCACCGTATTGCGCTAAATGTAACTCATCACGAACGCGGAGGAAAGAAGGTTATCGGTGGCAGGCGCGTCAGACCTAAGAGAACTGGAGGATCACCGGGACGTTCGGACTGGAGCGACTCTGACAGTGAAATAGAAAGGAAACGTACTCCACCATCTGACCCTGAGGATAAGAATAAACTAGAGCCTTGCACCAGTAAAGGACGGCGTTTGTCTTCTGCGCCAATTAGACTAAAGGAATTAAAGTCTGAGATGACTCCCAGCAAAATCCGCAAGAGAGCCACTCGCAATTCCACATCGGCTGCTTTGACGCCAATACCCAAGCGTCGACGCTCCAGTCTAACTCATTCAGGTCGTGATTATGATCTCATAGAAATTAGATCCGAATTGAAGGGTCTGCATAGTGTAAAACAAGAAACGGAAGATATGAAAGCAGATATAGTTGAAAAAGATCTTTCAATACCAGATATGACTGAACAGAAACATGACGATAAACAAGCTGAGGACGTTTACGAGTTCAAAGAACCTGAGCCCTTCGAGTTAGAGCTACACGATGAGAAGAAAAAACGCACGCATCGTATATTTGATGATATATCACCAAGCAAGTACACATCAGCGCTAACGAAATCACTCAGCGAAGAAATATCAGAAGATTTGAGATCGCGGCCACCAAGGTCACCTTCATTATCACCATTCCGTGATTATCCAATGACAGGGAGACAGACGCCCGAAGAGGATTCAAAAGATGGAGTCTTCTCCATGGATGATGACTCTTTCCCTGGAGATGGATTGTCAGGAGCAGTTTTTGAAGGATTCACGCCAGCTAAACATCAAGAAACATATTCTAAGAAACGAAAAATATCAAAATTGATTGACGATTCGCCTGATAGTCCCGCTGATGATGAACACTCATCTGACGATGAAGCTGATGATGTAAAGGTGAAAGAAAATAGGGAATTGACTCGTAATCTTGTGAAAACACTTAAAGATGTCACGAAATCACCAGAACAATCTAGGAAAGAGCTTCAGGTAGAAATGAATGAAGAAGAGGACATGAACGTAAAGGAGGAAGAGAGTAAGGGCGTCGAGGAGGTCCCGCCACCTGCTGTGATTGTTGAAAAAATTGAGGAGACTAAATTGGTAGCTATTCCGTCCGCAATTGCTTTGCCTCCAATTGATATTAAAATTGAGGATAAAGAAGATATCGAAACAACTGCCAATTTGAATATTCCTGATAGCCCACAAATGGACACAGAAGAAGATAAGTCTGAACCTGATAGTCCTGCTAGATCGGATATTATTCCTGATCCTCCACCAGGTTTCCTTCTTCATTCAGAGGGTCCTAAGATTGCTGATAAATTACTACAAGCTATCGCCAAACAGCAATCAACGTCGCCTCCTCCAGCTGAAGAGCGTTCTAATACCCCGGAAATGGATCCATTGCCTGAATTAGAAGCCAAAATACCGCCTAAAATAGAAGTAAAGAAAGATCTAGATGTGACATCGAAGAATAGTATATTTGGTGAGCCACCAATTTTATCAGATACAATGAGTGATATAAGAAAAGTGAAGAGTCCATCGCGTTTATTAAGTCCAATAAATATATTAGAGAGACGTAAGAGTATTGTGGACATGCCTTTGTGTTCGGGCGCTAAAAGTAATAAAGTATTAAGTGACACTATACAGAAATTATCAAGTCAGATCAATCAACCAGTGAGTAACATTACGTTGCCAGCATTCCAGACAGAGGAAAGGAGTTCTTCCAGTGATTCAGATGATTCTGATAGGAGATTAATAATAGACAAGCTATCGGTTGATGAATGGGGCAGTAGTGGGGGTAGTTCGGAAGGCCCGGTGGTACCAGCTCGTGCTGTAACAGGTGTTCATGCCACCAAGAGTCCAGGTGAATGGAGCGTTGGTGAAACGTTACTGATGCTGGAAGATGCGTGCAAAAACGAAAGGAAACACAGTGCAAATGTAGTCGTTGCTGGTAACATGAGGTCTCGTACAGTGTCTGGAGTATCAGCTGCCGAGGAGGATAGCAATTTGTCATTGTTATTATGCGAGGAAACCATTCCCGGGTCGCCTGCACCAGATGCTGAACCAGCTCCTCAGAGGTTACGACCGCATATGCCTTTTGCTTCGGCACCACCACACCACACAGAAGAGCGTCGTACAGAATCTTCTATATTGGGTATGAGCAGCAGTACATCAGTACTAAATGCACCTGATAATGGTCGACGTGTCACAAGAGAGACTACAGCATGGGGGCGTAGCATTGAACAATCCCCCTCTACGACACCTGACAGCGGTTCCGACATGTCACCACATAGAGACAGTCGCCGCTCTCGAGACAGTCCCCCGGAGAGAAAAGATGAGGAAGAGGACAGTCGGCCTCACGAGCCTATTCCTATGGATTTAGAAAAAACAGTTGGTGGTATTCGTTCCCGCAAAGTGTCAGAGAGTTCTGGTGCTGGCATGAGTGTGCCACCAACGGCTGGCAGAGGTCGTCCGCGACGTTGTCGTCGTGATACAGATGAGCCGCCTATCATACCGCCAATACCCGTTCCCGGGCCTACACTTAAATATAATTTCTATGTTGAACTTGATGCAAGATGGGATAGCCAGAGTCGCATCAATTTAATAACATCTAAACTGTCAGATCTCCGCAAAGCTTATCATAATGTGAAAGCAGAACTTGCAGCCATTGACAGGAGACGGAAGAAATTAAGAAGAAAAGAGAGAGAAGCTATTAAAGCGGCAAAAGCAGCGTGCTCGTGA
Protein Sequence
MQADDPPFLTVGTDVSAKYKGAFCEAKIKKVVKNIRCRVTLKVGGAITVDDDAIVKGNLRIGNTVQVKQDPKKDSVEAVLNKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEDSEGDAPVRPRKTDSTEREPHVGRVVLVDTASGTERRRPQPPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPADWAGVDAALQYMNNSVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKQGGYNRVTNQNQWKLIADKMGFHPVNTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQLPSSTTPTPTNQKSKSDKDSDKSEADKSEKEDGKPEPKVEKEVKEKEKEKEKEKEKEKSRSDEDDSADNQPLAVVPKIDKEKEREKEKEKEKERDKEKEREKEKPIEEKEKVKIQKSRIPVSTKIGKETQEKRTAKPRRSLSTREKGDSNGSTSTSRVSSRPQVSTDSDSSGRASRCGLSKKMQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSQEEHMLRGPGNIKASVGDKLQVYYGPAQSESKVTYEAKVIEISTEGLLRVHYTGWNTRYDEWIKPHRIALNVTHHERGGKKVIGGRRVRPKRTGGSPGRSDWSDSDSEIERKRTPPSDPEDKNKLEPCTSKGRRLSSAPIRLKELKSEMTPSKIRKRATRNSTSAALTPIPKRRRSSLTHSGRDYDLIEIRSELKGLHSVKQETEDMKADIVEKDLSIPDMTEQKHDDKQAEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSALTKSLSEEISEDLRSRPPRSPSLSPFRDYPMTGRQTPEEDSKDGVFSMDDDSFPGDGLSGAVFEGFTPAKHQETYSKKRKISKLIDDSPDSPADDEHSSDDEADDVKVKENRELTRNLVKTLKDVTKSPEQSRKELQVEMNEEEDMNVKEEESKGVEEVPPPAVIVEKIEETKLVAIPSAIALPPIDIKIEDKEDIETTANLNIPDSPQMDTEEDKSEPDSPARSDIIPDPPPGFLLHSEGPKIADKLLQAIAKQQSTSPPPAEERSNTPEMDPLPELEAKIPPKIEVKKDLDVTSKNSIFGEPPILSDTMSDIRKVKSPSRLLSPINILERRKSIVDMPLCSGAKSNKVLSDTIQKLSSQINQPVSNITLPAFQTEERSSSSDSDDSDRRLIIDKLSVDEWGSSGGSSEGPVVPARAVTGVHATKSPGEWSVGETLLMLEDACKNERKHSANVVVAGNMRSRTVSGVSAAEEDSNLSLLLCEETIPGSPAPDAEPAPQRLRPHMPFASAPPHHTEERRTESSILGMSSSTSVLNAPDNGRRVTRETTAWGRSIEQSPSTTPDSGSDMSPHRDSRRSRDSPPERKDEEEDSRPHEPIPMDLEKTVGGIRSRKVSESSGAGMSVPPTAGRGRPRRCRRDTDEPPIIPPIPVPGPTLKYNFYVELDARWDSQSRINLITSKLSDLRKAYHNVKAELAAIDRRRKKLRRKEREAIKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451249;
90% Identity
-
80% Identity
-