Basic Information

Gene Symbol
Xbp1
Assembly
GCA_028551675.1
Location
JAPWLS010000030.1:23009-23937[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-18 4.4e-15 55.4 13.8 2 63 39 100 39 103 0.95
2 2 3.8 2.9e+03 -1.7 0.3 42 51 180 189 162 197 0.50

Sequence Information

Coding Sequence
ATGAATGCCCCCATTATCATCACGGTGCCCAATGGCTACCTGGCGGAGAAGGTCAGTGGGGATTCTGACTCCCCGATGCCGTCTAGGAAAAGAAGGCTTGATCACTTATCATGGGAAGAAAAAATGCAGCGGAAAAAGCTAAAAAATCGTGTGGCGGCTCAAACGTCTCGCGATCGGAAGAAAGCTAAAATGGACGATATGGAGTCGCGTATCAAGCAGTTGGAAGATAGAAATGAGCAATTGGTGAAAGAAATGGAAAGTCTGAGAGCTTTGAATGAGCGTTTAGTCAGTGAGAACATGTCATTGCGTTGCAGTAAGACGGTGGCGCGGGACGTCGTGGGCGAGGCCTCTGGACCGGCAGAGTCCTATCCTCAGCAGAAGGAACCCTCCCCCACGGCGATCCGCGCGGCTCGTCTGCTGGTAACTCTATGCCTGCTCTCACAGACATTCTCGCACACCTCGACTCAGACGAATACCTCGACACGTTGCAAACTCTTGCAGACTCCCTGCTCCGAGAAATTGATGCAGACACTCCAAGCTCGCCTTCAAATGCCGAGATCGAAACTGGCAAACATGATGAAGGAATTGAAATGGTGGGGGCCACAGCAGAGCAACTGGAACCCGATAGAGGTGCAGTCCTAA
Protein Sequence
MNAPIIITVPNGYLAEKVSGDSDSPMPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDDMESRIKQLEDRNEQLVKEMESLRALNERLVSENMSLRCSKTVARDVVGEASGPAESYPQQKEPSPTAIRAARLLVTLCLLSQTFSHTSTQTNTSTRCKLLQTPCSEKLMQTLQARLQMPRSKLANMMKELKWWGPQQSNWNPIEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01452078;
90% Identity
-
80% Identity
-