Ttri002577.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- pnr
- Assembly
- GCA_905220615.1
- Location
- HG992312.1:49782-53665[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-16 1.8e-12 46.9 2.6 1 35 513 546 513 547 0.97 2 2 6.7e-18 2.1e-14 53.1 7.5 1 35 574 607 574 608 0.97
Sequence Information
- Coding Sequence
- ATGACCCTCGCGCAGACGAGTCAAAAGCAGCCTACAAATGTACAAATAAGGTACAACTTACAGCCTTGCAGAAAAGTATTTAAAGAAGCAGAGGCTCAGCTCTATGAGCGTACCCAACGAGGAGGACGCAGCTTTTGGAGTCTCGCTAAGACTTCCTTACTTCCACCGCTGAGACAGCCTGATGGCTCACTGGCGCATACGGCGAAGTGTTTGTCACTAATTCGCGGTAGAAGGCCGCCTACCTGCTTAGCTGACATGGAGCCCAGCGGGGACGCCGCCGAGCGCACGGAGCACGGCGAACAGGACGCGCACCATTCACACCACCAGGAGCATCAACAGCACATCGCCCAGCACCAGCAGCACCAGGAACATACGGAACATCTACAACAAAATACGGACCATCATCAACATCATCCGGAACATCTACAACAACATCCGGAACATCATCATCAACATCCGGAACATCTACAACAACATCCGGACCAACAACATCAACATCAGGCCGAACATCATCCCGAACACCACCTGGACCATCCCCAACAGCACATGGAACACCACACCGATCACATTCTACATCTGCAACATCACAGGGAGCCGGAGGAGGCGTTGCGACTCATCAAGGCCGAGGACAAGCACGACGGAGAAGCGATATCGGTGATCACGTCGCGGCGGCAGGTGCGCACTATCACCGCCGCGGGACATATCGCCACGGACGAAGTGCCCGTGACCGCGGCGGACGCGCGAGAAGACGTCAAGCGAGAACCAGCCGAGCAGAGTGGGCCCCTGCCCGCGCTCGCACCCCACCCCGCCGCGCACGCGAACCCCCCCGCGGACGACGCCAACCGCTACGTCGCGTACGCGGCGCGGCCGCAGGGCTACCTCGAGGCGGCCGGCGAGGAGAGGTACGGCGGCGCGCAGCAATCGCCGCAGTACGAGCTGGAGGCGCTCGCCGGCTACAAGCCAGGCACGTACGCGAGCCTGCAGCCGGTGAGCGGCGGATACGGCTACCTGCCAGGCGGGGTGCAGTACGCGGGCGGCAAGGAGCTGCTCATGCTGTACCAGGGCGGCGGCCAAGACTCTCCGCCCGGCCCGCTGTACCGCGACCCGCCCCTCGCCTCGCGCTCCTTCGTCTACGGCTCTCTGATGCCGCAGCAGCAGCTTTACGACGTGCCACCGAGCCCCAACTCGCAACAGATCACCATCTACAGCCAGAACAATGCCGTGCAGTACAAGGTGTCCGGCGGCGGCGAGCAGTACGTGGGCCAATTGGGCGCGGCGTCGCCGGGCGCGGACATGCTGGGCGGCGTGGGCGCGGTGGGTGGCGGCCTCGAGTACGTGAGCGGAGCGAGCACCAGCGGCTACGTGGTCGAGGCCTATCCGCAACAGAATTGGGCGGCAGGGCACAACCTACCCATGGAGAACTTCGAAGCGAGTGAGTTGAGCTATATGTGTGCGTTTGCGCGTTCATTAGTGGATGATGTTAAGTATGTCGGTTTGTGCGCAGACGGCGGCAACATGGCCGTGGAAATGAAGGAGTGCGTGAATTGTGCGGCCGCGTACACGCCGCTGTGGCGCCGCGACGGCACCGGCCATTACTTGTGCAACGCGTGCGGCCTGTACACGCGCGTCAACGGCGTCAACAGGCCGCCGCTCAAGGGGCAGAAGAGCAAGCCGCAGCAGCCGATGCCTTCGAACGGCAACCGGCGCGTGGGTGTCTCGTGCGCGAACTGCCGCACCTCGAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTCAACAGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGAGGAAGCGCAAACCCAAGAGCGTCGGCGGACACGCTGGCGTCGGCAGGCCCGGCCCGGCACTGGGTACGTGTACATCCATACATACATTAATGGCACATCAATCCAATTCTAATGACCATGCTTGCAATCCAATTGCAGGATACCGCTAG
- Protein Sequence
- MTLAQTSQKQPTNVQIRYNLQPCRKVFKEAEAQLYERTQRGGRSFWSLAKTSLLPPLRQPDGSLAHTAKCLSLIRGRRPPTCLADMEPSGDAAERTEHGEQDAHHSHHQEHQQHIAQHQQHQEHTEHLQQNTDHHQHHPEHLQQHPEHHHQHPEHLQQHPDQQHQHQAEHHPEHHLDHPQQHMEHHTDHILHLQHHREPEEALRLIKAEDKHDGEAISVITSRRQVRTITAAGHIATDEVPVTAADAREDVKREPAEQSGPLPALAPHPAAHANPPADDANRYVAYAARPQGYLEAAGEERYGGAQQSPQYELEALAGYKPGTYASLQPVSGGYGYLPGGVQYAGGKELLMLYQGGGQDSPPGPLYRDPPLASRSFVYGSLMPQQQLYDVPPSPNSQQITIYSQNNAVQYKVSGGGEQYVGQLGAASPGADMLGGVGAVGGGLEYVSGASTSGYVVEAYPQQNWAAGHNLPMENFEASELSYMCAFARSLVDDVKYVGLCADGGNMAVEMKECVNCAAAYTPLWRRDGTGHYLCNACGLYTRVNGVNRPPLKGQKSKPQQPMPSNGNRRVGVSCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSVGGHAGVGRPGPALGTCTSIHTLMAHQSNSNDHACNPIAGYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -