Ttri002581.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- pnr
- Assembly
- GCA_905220615.1
- Location
- HG992312.1:80342-85574[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 5.2e-13 48.6 6.2 1 34 179 211 179 213 0.97 2 2 7.5e-18 2.3e-14 52.9 5.6 1 34 233 265 233 267 0.98
Sequence Information
- Coding Sequence
- ATGTTCCCAGCGTCGGGCGCGCAGTACGAGGGCGGCGAGCAGTACGCGGCGCCGCTGTGGGCGGGCGGCAGGCTGCAGCAGTACGGCCACTTCGCGCACCAGAACGTCTGGCACCACCACCACGCGCCGCAGGACACCTACGGTAATACCCGCGCACGCACTTTTCCTTCCCTCAATGCTGACGCACGCACGGCGGCCGCAATGTTTCCACGAAGCCAGGATAATGTTGTGACACAACAACAACGCAGTGGCGACATTTGTTGTTTGCAAGTGATTCACTCAACACATAATGGTAATGATTACAATGTTGTCGCGTGCCAGTCGCCGCTGACCGTTGGCCGCGCGTTGTTGTGCGCGATGTGGCACCAGGGCATCCCACACATTGCAGGCGGCAGTGGTGCGCTGTACGGCCAGAACGCAGTGGTGATGAGCTCGTGGCGCTCTGCCTACGACGGACTACAACGGGCGCCAGCATACGCACCGTGGCGTACGTGTGATGCAGAAGGCGAGATGTCGTACGGCGAGGGCCGCGAGTGCGTCAACTGCGGCGCGATCCAAACGCCGCTGTGGCGCAGGGACTGCACGGGCCACTACTTGTGCAACGCGTGCGGCCTCTATCACAAAATGAACGGCATGAATCGGCCGCTGGTGAAGCCGAGCAAGAGATTGACGGCGTCGCGGCGCATCGGCCAATGCTGCACCAATTGCGGCTCCCGCTCCACGACGCTCTGGCGGCGGAACAACGAAGGCGAGCCCGTGTGCAACGCTTGCGGTCTCTACTACAAACTGCACGGCATCAATCGGCCCTTGGCGATGCGCAAGGACGGCATACAGACCAGAAAGAGAAAGCCCAAGAAGAGCAACGCGGGAAAGACGACAGAAGACTCCCCGAAAAAGGACGAACATTCGTCGCCCGGATTTGAAGGTGAGACATCGCTTGTCACAGCGGTTAGGTGCATAACATATCTATATAGGTATATAATGATGCGTGCTCTTTTCGCAGAAACGAAGGCGTCCTCCCTGGGCGAGCACACGCCGTCGGTGGTCCCTAACCAATATGCGCAATCGTTCCTGTCGCCGCCCGCGTCCTTCAGCGTGAAGAGTGAACCCTGCGCTGACTACGGCATGCACGGCCATTACCTCCACGCGCTGCACATCGGCGGCGGCGGCGGCGGGGGCATGCCCGACGAGGAGTCGAGCGGCTTCCTCCACCAGCGCAACGTGACCGCGCATGCCAAACTGATGGCCTCCACATAG
- Protein Sequence
- MFPASGAQYEGGEQYAAPLWAGGRLQQYGHFAHQNVWHHHHAPQDTYGNTRARTFPSLNADARTAAAMFPRSQDNVVTQQQRSGDICCLQVIHSTHNGNDYNVVACQSPLTVGRALLCAMWHQGIPHIAGGSGALYGQNAVVMSSWRSAYDGLQRAPAYAPWRTCDAEGEMSYGEGRECVNCGAIQTPLWRRDCTGHYLCNACGLYHKMNGMNRPLVKPSKRLTASRRIGQCCTNCGSRSTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSNAGKTTEDSPKKDEHSSPGFEGETSLVTAVRCITYLYRYIMMRALFAETKASSLGEHTPSVVPNQYAQSFLSPPASFSVKSEPCADYGMHGHYLHALHIGGGGGGGMPDEESSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -