Basic Information

Insect: Tinea trinotella
Gene Symbol: -
Assembly: GCA_905220615.1
Location: HG992332.1:1053780-1065659[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2 1.2e+02 3.7 1.8 1 23 1101 1123 1101 1124 0.72

2 8 0.067 3.8 8.4 0.9 1 23 1130 1152 1130 1152 0.98

3 8 0.00032 0.018 15.7 0.1 2 23 1184 1206 1183 1206 0.96

4 8 0.00022 0.013 16.2 2.0 1 23 1212 1234 1212 1234 0.99

5 8 2.6e-06 0.00015 22.3 1.2 1 23 1240 1262 1240 1262 0.98

6 8 0.12 6.6 7.7 2.0 1 19 1269 1287 1269 1289 0.96

7 8 7.5e-05 0.0042 17.7 2.6 1 23 1301 1324 1301 1324 0.97

8 8 1.3e-05 0.00072 20.1 5.1 2 23 1331 1353 1330 1353 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2	1.2e+02	3.7	1.8	1	23	1101	1123	1101	1124	0.72
2	8	0.067	3.8	8.4	0.9	1	23	1130	1152	1130	1152	0.98
3	8	0.00032	0.018	15.7	0.1	2	23	1184	1206	1183	1206	0.96
4	8	0.00022	0.013	16.2	2.0	1	23	1212	1234	1212	1234	0.99
5	8	2.6e-06	0.00015	22.3	1.2	1	23	1240	1262	1240	1262	0.98
6	8	0.12	6.6	7.7	2.0	1	19	1269	1287	1269	1289	0.96
7	8	7.5e-05	0.0042	17.7	2.6	1	23	1301	1324	1301	1324	0.97
8	8	1.3e-05	0.00072	20.1	5.1	2	23	1331	1353	1330	1353	0.96

Sequence Information

Coding Sequence: ATGAGAAATCGTGGCATCTCAAAGCGTAAAACTTATGATTATAATTTGCATCAAGTGGTCAATAATAACCAATTTGATTTACGTGATTTATTATATAATGGCATGTATAATATATCAAAGGCATACGGCTCGAACTATAATCATTATAATTATAATGATAGAAATGATATATATCCACAAAATAATTATTATCCTCAACCCGTACCATTATTATCCCTAAATTTTCCATATCATAAACAATCTAGTCATGTTTATGGGGATTATAAAAGTCAAGGGGACGGAAATTATAATGGATATTATTATGGAGATTCTAGTTATAGAAATAATAATAATAATAGGGTATATAATAAAGAATATTATCAAGTAGCTCGAACTAAAAAAACTGTGAAGAAAACTACAAAAAGCAATACTAATAGAAAGCAAAGTAACAAAGATAAACCGCCAATTAAAAGTTTACTAAATCTCAGTGTAACTGTTAACAATGATTTTAATATGCATGATACGCAAATAAAAACTAGTAATAACCAACATTCCAAAGCTTCTCCTACCAAACGTAATGCACTAGGGAAATGCGTTCAAAGCAATAATAATGTTCAAAGTACTGCATCAAGTAATAAGATCAGTAAGGAAAATAAGGGAACAATTGGTAATTGTAAGCAAAGTTCACAATCTGAACCTCCCAAACACAATATACAAGCGCAATCTGCTGTGAGCTATAAAAACCCTCAAATAACTGTTTCAACCAATAACACTAATAAGCAAATAATTACCAGTGGCAAGAAAAGTTCACAATCTGTTTCTACCAAACGTAATGCACAAGGACATGCTAAAGTAAAAAATGATATTGTAGAAATCTTTCAAAAAACTTCTCCAAGCAATATTACTGAAAAGCAAAGTACGCAATCTGTTTCTATCGTACCTATTGCACAAATGCAATCAATAGTAAACAATGAAAATATAAAGCAATCCCCAAAAAATGCCCCAAGCAATAGTAACAATAGGAAAAGTACACAACTAGTTCCTATCAAACGTAATGCACGAGGACAATCAGTAGCAAGCAGTGAAAAGATAGGAAACTCTGTTGTAAGCAATGTTACCCATAAGCAAAGTACGCAAACTGTTCCTACCAAACGTGATGCTCAAGAGCATGCTAAAGTAAGCAATGAAATTACAGAAAACTCTGTTGTAAGCAATGTTACCCATAAGCAAAGTACGCCAACTATTCATACCAAACGTGATACACAAGAGCATCCTAATGTAAGCAATGAAAATACAGAAAACTCTGTTCTAAGCAATGTTACCAATAAGCAAAGTACGCAAACTGTTCCTACCAAACGTGATGCACAAGAACATGCTAAAGAAGGCAATGAAAATACAGAAAACTCTGTTCTAAGCAATAATGGCCCTAGGCAAAGTACGCAAACTGTTCCTACCAAACGTGATGCACAAGAACATGCTAAAGAAGGCAATAAAAATACAGAAAACTCTGTTCTAAGCAATAATGGCCCTAGGCAAAGTACGCCAACTATTCATACCAAACGTGATACACAAGAGCATCCTAATGTAAGCAATGAAAATACAGAAAACTCTGTTCTAAGCAATGTTACCCATAAGCAAAGTACGCAAATTATTCCTACCAAACGTGATGCACAAGGACATGTTAAAGTTAGCAATGAAATTACAGAAAACTCTGTTCTAAGCTATAATGGCCCTAGGCAAAGTACGCAAACTGTTCCTACCAAACGTAATGCACAAGAGCATGCTAAAATAAGCAATAAAAATACAGAAAACTCTGTTGTAAGCAATGTTACCCATAAGCAAAGTACGCAAATTGTTCCTACCAAACGTGATGCTCAAGAGCATGCTAAAGTAAGCAATGAAATTACAGAAAACTCTGTTTTAAGCAATAATGGCCCTAGGCAAAGTACGCAAACTGTTCCTACCAAACGTAATGCACAAAAGCATGCTAAAGTAAGCAATGAAAATACAGAAATCTCTGTTCTAAGCAATAATGGCCCTAGGCAAAGTACGCCAACTATTCATACCAAACGTGATACACAAGAGCATCCTAATGTAAGCAATGAAAATACAGAAAACTCTGTTCTAAGCAATGTTACCCATAAGCAAAGTACGCAAATTATTCCTACCAAACGTGATGCTCAAGAGCATCCTAAAGTTAGCAATGACGATACAGGAAACTCTGTTCTAAGCAATGTTACCAATAAACAAAGTACGGAAACTGTTCCTACCAAACGTAATGCACAAGGACAACCTTTAGTAATAATTGAAAACTTAGAACACTCTCAAAATAATCAAACCAATTCTCAAAGAGATAAAATTAACAAAGAAAGTTCTCATTTCGCTCTCAAAAATAACCCACAGATTCAATGTAATGTAAATTCAGTTAACCGTCAAAGAAAAGGCGATAATACACAACTAAAACCAAATAAAACAAAAGCTGAAGACAATTGGTTCGAAATAGAAAATAAAAGAATTAAAAGAATAATTCACGAAGCTGTTAAATTACCGAAAGACAATATTAGTGTTGAAATATATTCCGAACCAAAAAATGTTTTAACAGCCAAAGATATAAGAAAGATTTTGGAAGATAAAGTTGTTGAAAATGTTCTTGATACGAAAAGTTTTTGGGCGCCTAAATTTAACAATTGCAAAGAAAACAAGAGCTCATTAATTTTACAATGCGCAAACGATTTAACCGTTATTTGGCTAGAAAATATAATAGAAAATGTCTCTAATAAGAAAGCAAAATTAATTTTACAAAAAGACGTTATAATTAACAACCTAACGGCTACAATAAAATTGCCTAAAACCAAATACAATTTGAATGTTTGCAAGAATTTGTTATCCTGGCAAAATCCAGAATTAGAAATCAAGGTTAATGAAGATAAATGTGTATTATGTATAGAATGCCAAAGGAAAATAGATATGTGTATAGAATTTCATGAAAAAGTATTATATGCTGAAAATGTATTGAAAATATTAAAACAATATGGAGAAGAATCTAATGAGTATAAAGATATAATAAATGAAGTTAGAATGTGTAATAATATTATAGTGAAGAGTAATACAGAAAATACAGAAAAATGTAATAAACCAATAAATAATATTAAACAAGAAGTAACAGAAAATATTCCCGAACAAAATACAAGCCAAGAAGATACGAACAAAAACGAGCTCAAGTTCAAAGGAATGGGATTCAAAATCCTTTACTTAACTCTCGACAAGCAAATGAAAGAGATAGAAGACAAAAAGAAAGAGAGAAAGTATATCGAGAGTAAATTTAAATGTGAATTTTGTGGTATTTCGTTTTTGGAGGAAGATGTTCAAAAGGAGCATTTGAAAAGGCATTCCCTGGATGCGGGTAGATACAAATGCACCGTTTGCACACTGCGTTACGCGTCATCACAAGTGTACAGTCAACACCTATTATCGCACAAACGTACATTTGTTTGTACAGCGTGCGGTGTTGGAGTGCGTCGGCCCCATCATTGCCACACGCATAAATGTCAAAGGAAACCCGCTGAAACCGTCTGTACTTATTGTTTTAAAGTTGTCAGAGACGCGGCGTCCTTAAAGACTCACATAAAAGTGGTTCATGAAGACAGGAATAAATATTCCTGCGACATATGTCAGCAGACGTTTGCACAGAAACATAAAATAATATTGCATTTACGTACACACACAGGTGAAAAACCTTTCGAATGCGACGTGTGCAAAAAGCGGTTCGCTTCCAACTCCAACCTCAAATCTCACAAAGCAACACATAATGAGGTACGAAATGAATATTACTGCGTCGAATGTAACTTGTATTACAAAAGCGAGAAGAGCCTAAAACGACACTTCTTTGAGTCGAATAAACATGAACAATATTCTAATAGCTTCAAATGCATTAAATGTCCTAAAAATTTCAAAAGTGAGAAGAATTTACAAAAACATATAAACACTAAACATGTACAAAGTGTAGTTTCCAAATGTCACCTGTGCAACAAGACATTTTCAAATAACACAAATATGAGGAAACATATGAAGAATATACATGAAAATACATTTTGA
Protein Sequence: MRNRGISKRKTYDYNLHQVVNNNQFDLRDLLYNGMYNISKAYGSNYNHYNYNDRNDIYPQNNYYPQPVPLLSLNFPYHKQSSHVYGDYKSQGDGNYNGYYYGDSSYRNNNNNRVYNKEYYQVARTKKTVKKTTKSNTNRKQSNKDKPPIKSLLNLSVTVNNDFNMHDTQIKTSNNQHSKASPTKRNALGKCVQSNNNVQSTASSNKISKENKGTIGNCKQSSQSEPPKHNIQAQSAVSYKNPQITVSTNNTNKQIITSGKKSSQSVSTKRNAQGHAKVKNDIVEIFQKTSPSNITEKQSTQSVSIVPIAQMQSIVNNENIKQSPKNAPSNSNNRKSTQLVPIKRNARGQSVASSEKIGNSVVSNVTHKQSTQTVPTKRDAQEHAKVSNEITENSVVSNVTHKQSTPTIHTKRDTQEHPNVSNENTENSVLSNVTNKQSTQTVPTKRDAQEHAKEGNENTENSVLSNNGPRQSTQTVPTKRDAQEHAKEGNKNTENSVLSNNGPRQSTPTIHTKRDTQEHPNVSNENTENSVLSNVTHKQSTQIIPTKRDAQGHVKVSNEITENSVLSYNGPRQSTQTVPTKRNAQEHAKISNKNTENSVVSNVTHKQSTQIVPTKRDAQEHAKVSNEITENSVLSNNGPRQSTQTVPTKRNAQKHAKVSNENTEISVLSNNGPRQSTPTIHTKRDTQEHPNVSNENTENSVLSNVTHKQSTQIIPTKRDAQEHPKVSNDDTGNSVLSNVTNKQSTETVPTKRNAQGQPLVIIENLEHSQNNQTNSQRDKINKESSHFALKNNPQIQCNVNSVNRQRKGDNTQLKPNKTKAEDNWFEIENKRIKRIIHEAVKLPKDNISVEIYSEPKNVLTAKDIRKILEDKVVENVLDTKSFWAPKFNNCKENKSSLILQCANDLTVIWLENIIENVSNKKAKLILQKDVIINNLTATIKLPKTKYNLNVCKNLLSWQNPELEIKVNEDKCVLCIECQRKIDMCIEFHEKVLYAENVLKILKQYGEESNEYKDIINEVRMCNNIIVKSNTENTEKCNKPINNIKQEVTENIPEQNTSQEDTNKNELKFKGMGFKILYLTLDKQMKEIEDKKKERKYIESKFKCEFCGISFLEEDVQKEHLKRHSLDAGRYKCTVCTLRYASSQVYSQHLLSHKRTFVCTACGVGVRRPHHCHTHKCQRKPAETVCTYCFKVVRDAASLKTHIKVVHEDRNKYSCDICQQTFAQKHKIILHLRTHTGEKPFECDVCKKRFASNSNLKSHKATHNEVRNEYYCVECNLYYKSEKSLKRHFFESNKHEQYSNSFKCIKCPKNFKSEKNLQKHINTKHVQSVVSKCHLCNKTFSNNTNMRKHMKNIHENTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -