Ttri008732.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- Znf131
- Assembly
- GCA_905220615.1
- Location
- HG992314.1:2027325-2040092[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0008 0.045 14.5 0.5 1 23 303 325 303 325 0.98 2 11 0.18 10 7.1 0.2 1 23 359 381 359 381 0.95 3 11 8e-05 0.0045 17.6 3.6 1 23 386 409 386 409 0.96 4 11 0.00098 0.055 14.2 0.3 2 22 414 434 413 436 0.88 5 11 0.16 9.1 7.2 0.2 3 20 448 465 447 467 0.95 6 11 5.4e-06 0.00031 21.3 0.1 3 23 477 497 477 497 0.99 7 11 1.3 75 4.3 1.0 2 23 511 533 510 533 0.95 8 11 0.00015 0.0084 16.8 1.6 1 23 550 572 550 572 0.96 9 11 1.1e-05 0.00062 20.3 1.8 1 23 578 600 578 600 0.99 10 11 6.1e-05 0.0035 18.0 3.5 2 23 605 626 604 626 0.98 11 11 0.013 0.73 10.7 3.8 1 23 632 655 632 655 0.94
Sequence Information
- Coding Sequence
- ATGTACTCTTACGTTGCTTGTCGAGTATGTTTAGTAACAGATAAACAATTTAAGACTTTAGAGAGTGATCCTGTTATAAGAGATGGGTATTTGAATCTTGTTGGATCAGTGCAACAACTATTAGCTATGTATGAAATAGATATGTACAAGAAAAGGCGTGCTGTGTTAATCCCCTCTGCAGGGACAACGGTGAGGGGAATAAGACAACGGTTTGCTCATATGGACTATAATCCACTCCAAACTGTATGCTTAGAATGTTCTACATTACTACGCAAATGTTCTCAATTAAAACATAAATGTGTAAGAACAAATGCTATCTTAAAGGATATAATAGTGAAGAGACATGGTCTGATATCTTATGACACAATAAAGGAAGTGGATAGAAAAACAAATATGTTAGAATCAAATCTATCATCAACCAAATTGAATAATATGAATATACCAAGAATAGTAATAAAAAGTAATAATTTGATACCAAAGGTTGTAAAAAATAATGCAGAATCCTGTGGGGAGTCAAATATTGATCATTCAAATTCAATTTCTAAAGATAATGAAAACAAAGAGAATACAAAACAAGAATTAAATGTAAATATAAATAATATTGAAAATACGAAAGATGTAAGTGATGATAGTGAGATAGATAATGTGGAATATTTAGAAGACTGGAATGATATTTTAGATGAGGAAGAAAACATAGAAGAAATAACTGAAGTCAAAAGAAATATAAAATGTAAAAAGAAAGATGATGATGAACCAAATGGGAAAGATGATGATGAAATAAAGAATGAATTGCAATATGATGATGATTTAATTAATGAGCATACTGAAGTTATATATTTGACAACGGAAATGGCAAAGCAAGAAGTGTTATCAAGAAAAGGGACAAGTAATTATAACAATAATCCCTTTAAATGTGATAAGTGTTTCAAAGCATTTGGTGTTGAAGTTGCTTTTAATAATCACATGGAAAAACATACCACTAAATTTGGTGAGGTAGAATGTAAAATTTGTCTTTTACGATTCGTCACTCATACAGCTTGCGCGCATCATTGTTACAATTGTCATAAGACGAAATTTATATGTAAAACATGCCCATACGTGTGCTATGCTCCAAAAAACGTGGTCAGCCATGTAGCTGTCCATAGAGGGAAGAGATTCGAATGTAACACTTGTAATAAAATATTCAGGACGAGCGACAGTTTACATTCGCATGAAAACAAAAGGCATTCAAGGGAAATTGTCTGCGATTTGTGTGGTAAAGCATTTAGGTCGCCGCGCGGACTGCATTTACATAAAGTTCTGCGACATAAAAAGGAACAAAATGAGAAGCGTGGTCCATTCTGTTCTGAATGTAATATCCATTTTGCTAATGATACGGCTTGGAAAAGACATTTGGTATTGTCAACTAAGCATAGAATCAGTAATGGGTGTAAAATTTGTGGTGAAAGTTTCAATGGTATTTCAGAGTTAAGAGCACATATGCGCGTGCATGCTGGTACGCACAATCGAAAGTTTTATAGACTACCTTCCAAATGCTCTAAGTGTGACCATTGGATTGAAAATAAGACTGAATATGCTGACCATATGAAATCGGCGCATCCGAATTTAATATTGAAAAACATACTAAGACATGACGCCATAGAACAACACATTTGTGAATATTGCGGAAAGATATTTAAGAAGAGGGTTCTTATGGAGTATCATTTACGCTTGCACACTGGTGAGAAGCCATTCAAATGTACGGAGTGTGATAAGGAGTTCACGTTCTCGTCAGGATTAAGTTTGCACAAACAAACGCACAGAGAGCGCGTCAAGTGCCATCTGTGCGGCAGGAGTTATTTTACAAAGAGATCCTTGGCCAAACATCTGCAGAAACATACTGGCGTCCGCCCTTATAAGTGCGAATTATGTGACAAATCATTCTTTAACCGCTGTGAGACTCGGCTGCATGCGAAATATGTGCATTATAAACAGCCGTGGCCTAAAAGAGACAGGAGTAAAACGAATAAGAACAATAATGAAGACAATTTGAATTTATAA
- Protein Sequence
- MYSYVACRVCLVTDKQFKTLESDPVIRDGYLNLVGSVQQLLAMYEIDMYKKRRAVLIPSAGTTVRGIRQRFAHMDYNPLQTVCLECSTLLRKCSQLKHKCVRTNAILKDIIVKRHGLISYDTIKEVDRKTNMLESNLSSTKLNNMNIPRIVIKSNNLIPKVVKNNAESCGESNIDHSNSISKDNENKENTKQELNVNINNIENTKDVSDDSEIDNVEYLEDWNDILDEEENIEEITEVKRNIKCKKKDDDEPNGKDDDEIKNELQYDDDLINEHTEVIYLTTEMAKQEVLSRKGTSNYNNNPFKCDKCFKAFGVEVAFNNHMEKHTTKFGEVECKICLLRFVTHTACAHHCYNCHKTKFICKTCPYVCYAPKNVVSHVAVHRGKRFECNTCNKIFRTSDSLHSHENKRHSREIVCDLCGKAFRSPRGLHLHKVLRHKKEQNEKRGPFCSECNIHFANDTAWKRHLVLSTKHRISNGCKICGESFNGISELRAHMRVHAGTHNRKFYRLPSKCSKCDHWIENKTEYADHMKSAHPNLILKNILRHDAIEQHICEYCGKIFKKRVLMEYHLRLHTGEKPFKCTECDKEFTFSSGLSLHKQTHRERVKCHLCGRSYFTKRSLAKHLQKHTGVRPYKCELCDKSFFNRCETRLHAKYVHYKQPWPKRDRSKTNKNNNEDNLNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -