Ttri011576.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- Znf131
- Assembly
- GCA_905220615.1
- Location
- HG992334.1:3696477-3702408[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0038 0.22 12.3 1.9 2 21 103 122 102 123 0.94 2 18 0.2 11 6.9 0.9 2 23 128 149 127 149 0.92 3 18 0.091 5.1 8.0 0.1 2 23 155 177 154 177 0.96 4 18 0.0049 0.27 12.0 1.6 1 23 181 203 181 203 0.91 5 18 0.00016 0.0091 16.7 0.3 1 23 240 263 240 263 0.95 6 18 4.9e-05 0.0028 18.3 3.1 1 23 269 291 269 291 0.98 7 18 0.49 28 5.7 0.6 1 23 298 320 298 320 0.97 8 18 5.6 3.1e+02 2.4 1.0 1 23 326 349 326 349 0.92 9 18 0.25 14 6.6 0.4 3 21 472 492 471 493 0.86 10 18 0.00089 0.05 14.3 0.1 3 23 500 521 499 521 0.94 11 18 0.0012 0.067 13.9 2.6 1 23 526 549 526 549 0.97 12 18 0.00055 0.031 15.0 0.9 2 23 555 576 554 576 0.96 13 18 2.5 1.4e+02 3.5 0.8 2 20 580 598 580 600 0.91 14 18 3.2e-05 0.0018 18.9 0.3 1 23 625 648 625 648 0.95 15 18 0.00019 0.01 16.5 0.8 1 23 654 676 654 676 0.97 16 18 0.87 49 4.9 0.1 3 23 684 704 682 704 0.97 17 18 0.033 1.8 9.4 0.4 1 23 710 733 710 733 0.94 18 18 0.00022 0.013 16.2 0.6 2 23 740 762 739 762 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACGAACCTTGCTTGCCAGTCGGAGTGTGTCAGCCATGCAGTGAGGAAGCCATAGCTGCAAGGAAGTTCAGGAACTTATGCCTTGATGGAAAGAAACTATGGGAAAAAACCTTAGAGAATTTAGACAATGTACCTGCACCAAATGAAAACGTCAAATCCTATTACCTCTTATTAGGGAATCTGGAAAACAAACGACTATTATATACAAATTACCGCAATGCTCCTTTACAACAAGCGATTAGTAAAGTTAAAAGGCTGGAGACGATCAAGAAGTTAAAAGACGAATATAAATTAGCTTGCAAGTGTTCCTTTTGTGGAATGAAGTTCTCCATGCCTTACTACTTGAGTTTGCATTTGAGGAATACAACTAAAGACGTTTGTAGGTTCTGCGGTAAGGTTTTGGAAAGGAAAGACTTGAGGCACCATTTGGCTAAGGCTCATAGGAAGCTTATTTTACAATGCAACCATTGCTTGGATCCGTTTGATGATGAAGAGGATTTACTGGAGCATGTGAGAGTGGAACACACGAATAAATATCACTGTGGAACTTGTGGGCATGGGTTCTCAAATGAACGAGCACTAAGAGCTCATAGCTACGCTCATTCGTTATTCCATTGTCCGAAATGCATGAAAAGTTTCGAGAACCGCCGTTGCTATAGATACCACTTGAGTAAATGCAAACATGAGGTGGCAGCGCAGAACTTTGTTAATTACGAATGTGATTACTGCGGGAGTGTTTACACAAAGAAACCGTCTCTGAAAGTCCACATAATTCAAAAGCATCTGAATATTTTACCATACACTTGTAAGAATTGTGGCAAGCGAACGTCAACGTTAGCTCATTTGAAATCGCACGAATCTACCCACATTGAAGGTCGGAAGTTATTTCAATGCAACATATGTAGTTCTCAAATGAAGTCGCAGTTAGGTTTCATTCTTCACCAGCGCATTCATACAGGGGAAAAACCGTTTGAGTGTCTGAAGTGTGGTGATCGATTTCTTTCTGCGTCGCGTAGGCTAGATCATATGAAGCGCAGACATGGTAATGTGAACGATTTGCCGCATAAATGTGAGCATTGTTCAGCGCGGTTCGTATGCGATGAGCAACTATTACCACGATGTATTTGTAACAAGTGCTTAAGTGCAGCACTAACGGCTTACGAACTTAACTATATAGTCCAGAAGTCACGACATTTATGGAGCAGTGCCATTGAATCCTTAAGCGAGATACCGCCAAATTTCTTTGAGGGCACCAAGTCAATATGTGCATTCATGAGAGGAGACAACCTGGATATGAACATTGTAGCTGATTGCTCAACCGACAACAGTAAAAGCATTTTAGACCGACTACACAGCGGAGTCAAAAAAGCAAAGACGAAACCCAAACCCAGACAATCAGGACCTATGTGCCTCTGTATAGACTGTGGAAAACAATTCCTAAATCCATACCTCCTAAACTTACATTTAAAGAATAGTGCTTTGAAAGAAGCGTGTAATTATTGCGGTGTTGTTTTTAGACGTGGCCAGGAGTTGAAGGACCATTTGGAGAATATACACGGGGAAGCGTGGTTTAGCTGTAACAAGTGTCCGACTTTATTTTCGAACGAGAAAAGCCTTAAAGATCACAAGAAGAAGAATCATAAAAATGGCGTACAAGTTTGTATGGACTGTGGTCGCTGTTTTACTAGAGTAGCTACTTTTGAAACTCATGCTCTAATGCACGCTGTTAGGACGTGCCGAGCCTGCGGTGTCCAGTTTGATAATCGAGCATGTTACAGAGTCCATAGATCCCAATGTGAACCTAGTGCTAAACCTAGTCAAAAACTAACGCGCCAAAGCAGAAGCAACATTCGAGATCCAGCTACCTTCATTTGTGATTATTGTGAGAAATCCTATAATTCAAGACCGCAATTGAAAAACCATATTTTATGGATACACATGGATGTCAGACCACATCAATGCCAATGGTGTGGAAAACGATTTTATACTTCAGCCAGATTGGCGGAACATACCATAGTACATACTCGGGAAAGAAATTTTGGTTGCGATATTTGCGGAGCTAAACTCGTCTCTAAAATGGCTGCGGTGTACCATAGGAGACGACACACTGGGGAGAGACCCTACGAGTGTCCGGACTGTGGCGATAGGTTCATTTCTTCGTCACGTAGATCTGAACACGCTAAAAGAAGGCATGGTAGAGGGTCAAGAATACAGTGCGCGCTATGCCCGTCGTCGTTTGTTAGAAGTCACGAATTAAAAAAACATATAGAAAAAGTACATAAGGATATAGATACTGAAAATGAATATAAAATAGTACGAGAAGCTGGATCACTTTGTTTGAATTGGAATTCGAGATCATAA
- Protein Sequence
- MVDEPCLPVGVCQPCSEEAIAARKFRNLCLDGKKLWEKTLENLDNVPAPNENVKSYYLLLGNLENKRLLYTNYRNAPLQQAISKVKRLETIKKLKDEYKLACKCSFCGMKFSMPYYLSLHLRNTTKDVCRFCGKVLERKDLRHHLAKAHRKLILQCNHCLDPFDDEEDLLEHVRVEHTNKYHCGTCGHGFSNERALRAHSYAHSLFHCPKCMKSFENRRCYRYHLSKCKHEVAAQNFVNYECDYCGSVYTKKPSLKVHIIQKHLNILPYTCKNCGKRTSTLAHLKSHESTHIEGRKLFQCNICSSQMKSQLGFILHQRIHTGEKPFECLKCGDRFLSASRRLDHMKRRHGNVNDLPHKCEHCSARFVCDEQLLPRCICNKCLSAALTAYELNYIVQKSRHLWSSAIESLSEIPPNFFEGTKSICAFMRGDNLDMNIVADCSTDNSKSILDRLHSGVKKAKTKPKPRQSGPMCLCIDCGKQFLNPYLLNLHLKNSALKEACNYCGVVFRRGQELKDHLENIHGEAWFSCNKCPTLFSNEKSLKDHKKKNHKNGVQVCMDCGRCFTRVATFETHALMHAVRTCRACGVQFDNRACYRVHRSQCEPSAKPSQKLTRQSRSNIRDPATFICDYCEKSYNSRPQLKNHILWIHMDVRPHQCQWCGKRFYTSARLAEHTIVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGERPYECPDCGDRFISSSRRSEHAKRRHGRGSRIQCALCPSSFVRSHELKKHIEKVHKDIDTENEYKIVREAGSLCLNWNSRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -