Ttri013354.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- ZFY
- Assembly
- GCA_905220615.1
- Location
- HG992331.1:7083551-7088037[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00072 0.041 14.6 1.8 3 23 162 183 160 183 0.95 2 19 1.7 97 4.0 0.2 2 23 198 218 197 218 0.92 3 19 0.015 0.84 10.5 0.7 2 23 224 246 223 246 0.94 4 19 0.81 46 5.0 2.6 2 21 255 274 254 275 0.92 5 19 0.027 1.5 9.7 1.0 2 23 307 329 306 329 0.96 6 19 2.8 1.6e+02 3.3 1.5 3 23 337 358 336 358 0.94 7 19 0.059 3.3 8.6 0.3 1 21 362 382 362 383 0.92 8 19 0.047 2.6 8.9 0.2 1 23 391 413 391 413 0.96 9 19 1.9e-05 0.0011 19.6 1.1 2 23 419 440 418 440 0.97 10 19 0.85 48 5.0 1.3 2 23 445 466 444 466 0.96 11 19 0.23 13 6.7 3.8 1 23 472 494 472 494 0.96 12 19 0.0038 0.21 12.4 0.2 2 23 502 522 502 522 0.97 13 19 1.3e-05 0.00076 20.1 3.0 1 23 538 560 538 560 0.98 14 19 1.1 60 4.6 0.1 3 23 566 585 564 585 0.88 15 19 1.3 71 4.4 0.4 3 23 593 614 591 614 0.94 16 19 0.00022 0.012 16.3 1.0 1 23 620 642 620 642 0.99 17 19 5.6e-05 0.0031 18.1 4.2 2 23 651 672 650 672 0.97 18 19 0.0017 0.098 13.4 0.4 1 23 678 701 678 701 0.97 19 19 0.042 2.3 9.1 0.4 2 23 707 729 706 729 0.96
Sequence Information
- Coding Sequence
- ATGTCAGAAATAGGGGATGAAGTAATTAAAATAGATTACACGAAGTTAAAAAATGATGAATTTCGCAAATGGAAGACTAAACTAACCAATTTGATTCACTCTAATACATATTGCGGACTGTGCCTGGAACAGGGTGATTGGACATGGCATGTGAATGCCCGTATTCAAATAGCTGAGTTGGGCCCATTACATGATAGTGCGATGATACATGTGCTCGAATATCTTTTTGGTGAAGAAATCCAAGACTCATTGGCAAGTGCTATAATTTGTGAAGAATGTACAGACAAAGCAATACAATCATACCTGTTCATACATAAAACAAAAAAGACCAGCAGAATACTATCAACTTGCGTACAGAACATCAGCGAGAACATCGACCAGACATTAAAGAACCAAGAATTAGAACAATATGAGAAATCTATTATTTGTCTCAGTTTAGAAGGTATACTCGGCCTTGATAAAGCGATTCCGGGGGATTATGGTTGTTCTAAGTGTAACCGCAAATTTGCAACCCATAATGGTTTAACCAGACATCTTGAGGTCAACCATTTAGAGAAGCCAAATACACAACATGCGAAGTTGTCGATAATAAAATGCGATGAATGCGATTTGGTTCTGTTGGATAAAGAGTTGGAGGAGCATCGGAAAACTCATGATGTTAAGTCGTGGGTTTGTAGTGTTTGTGACAAACAATATTATAGTTCCACTTGCTTCGATGCACATATAAAGGATGTACATAACGTTAATAATGCTGAACTTGTAACATGTGACTTATGCTTGAAGACATTCCTAACTAAATCATCTATGACGAATCACAAATGTAAATACACTTGTAGTGAATGCTCCGAGATGCCTTGCGTACACCACAAATACTTAGTGAGCTATAGAAATCAAAAAGAGAGTGGTATCACCAATGTGCAATGTCTGGACTGCAATTACACTTGCACAAAGAAAATCAGTATGATCTCCCATGTTAATGTTGATCATTTAGATAAATATGACAATTTGTGTCTTTTCTGTGGTACTTCATTCCAGTGTAAACCAGCTCTTATACAGCATACCTTGAAATACCACTCGGAGATGTACCCCTGCGAGCATTGTACAATAACATTTGGCAGTATAAATGTATTAAACAAGCATAAACTCACTTGCGCTACACTACCACGAACATACGTTTGCGATATATGTTTAGTCACATTTGAGGAGGAATTCATGCTAGAAAAACATAAAGAGAATCACACAAAACCGGAATTAAAGTGTAGTGTTTGCGAATTAACTTTTACTAAACAATCGGAATTCAAAGCACATGTAAAAACCCATGATATAACTATATCTTGTTCTATGTGTACAATGGATTTCAATTGCAGAGAAGAATATAAAGCCCATGTTGAGACACATCCGGCTGGAACTAAACACATGTGCAGAGTATGTGGATCGATGTTCAATTCGAAGATAAACCACAGAAAACACATACAGTGGCATGGGAAATCATTAGAAAAAGAAAAATGTCCTACATGCGGCAGATATGTGAACTCATCCTACATAAAAGCCCATATGAGGATACATAATAAAAAGGGTAGAAGTATAGTCATGAAGTCAGTAGTAAGGTCATATTCATGCGATTTGTGTAAGAAATCCTACACGACATCAAACAGTTTGAAACGTCACAAAGAAACACACAAGGAACATGTTATTTGTGAAATTTGCAAGATGTTGGTCAGACCAAATTCCATGCAACGACACTTGGCTACTCACGGGACAGTGAATAGGTTGAATTGTGAAGCATGTCCATACACAACTATATTTCCGATGTGTCTAGAAGCTCACAAGAATAGAGTACATTTGAAAATAAGACCTTTCCGTTGTCCCATCTGTCATAAAGGTTATTATGCCAAACCTAATCTTTATGGACATATAAAAACTCATGATACTTCGACGGAGTCAAAGAAGAAATGTGGTGTTTGTGGTAAATACTTCTCTAATACGCAGTGTTTGAAGAAACATATGAGGTTGCATACGGGTGAGAAACCGTACCCCTGTGCAGAATGTGATCTGAGTTTCACAACGGCTAGTCGGAGACAGGAGCATGTTAAAAGAAAACATGGTGTACCAAAGATCAGGTGCCCTATATGTAATAATCTATACTTCACTCCAAGAGATGTAAGGTCTCATATAAAGAAAACCCATTGTCATATACAAAAGAAAGATGGCCAAGTGTTTATGGTTGAGGAGTTAGAGCCGGAGCATAGGTATATATTTAAAGATCAACGAAATCCAGAGAATATTGAGAATTTTGAAGAAGCTGATAATGTTGAAAGCACATACGCGGCTGATGTAGAAATTGTGGAATAA
- Protein Sequence
- MSEIGDEVIKIDYTKLKNDEFRKWKTKLTNLIHSNTYCGLCLEQGDWTWHVNARIQIAELGPLHDSAMIHVLEYLFGEEIQDSLASAIICEECTDKAIQSYLFIHKTKKTSRILSTCVQNISENIDQTLKNQELEQYEKSIICLSLEGILGLDKAIPGDYGCSKCNRKFATHNGLTRHLEVNHLEKPNTQHAKLSIIKCDECDLVLLDKELEEHRKTHDVKSWVCSVCDKQYYSSTCFDAHIKDVHNVNNAELVTCDLCLKTFLTKSSMTNHKCKYTCSECSEMPCVHHKYLVSYRNQKESGITNVQCLDCNYTCTKKISMISHVNVDHLDKYDNLCLFCGTSFQCKPALIQHTLKYHSEMYPCEHCTITFGSINVLNKHKLTCATLPRTYVCDICLVTFEEEFMLEKHKENHTKPELKCSVCELTFTKQSEFKAHVKTHDITISCSMCTMDFNCREEYKAHVETHPAGTKHMCRVCGSMFNSKINHRKHIQWHGKSLEKEKCPTCGRYVNSSYIKAHMRIHNKKGRSIVMKSVVRSYSCDLCKKSYTTSNSLKRHKETHKEHVICEICKMLVRPNSMQRHLATHGTVNRLNCEACPYTTIFPMCLEAHKNRVHLKIRPFRCPICHKGYYAKPNLYGHIKTHDTSTESKKKCGVCGKYFSNTQCLKKHMRLHTGEKPYPCAECDLSFTTASRRQEHVKRKHGVPKIRCPICNNLYFTPRDVRSHIKKTHCHIQKKDGQVFMVEELEPEHRYIFKDQRNPENIENFEEADNVESTYAADVEIVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -