Ttri010269.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- ZBTB41
- Assembly
- GCA_905220615.1
- Location
- HG992332.1:1024501-1034651[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.058 3.2 8.6 2.1 2 23 256 278 255 278 0.91 2 11 0.00011 0.006 17.2 3.5 1 23 285 307 285 307 0.96 3 11 0.086 4.8 8.1 1.3 1 23 311 334 311 334 0.97 4 11 0.0029 0.16 12.7 4.9 1 23 339 362 339 362 0.98 5 11 0.00012 0.0069 17.0 1.5 2 23 367 389 366 389 0.96 6 11 0.0017 0.097 13.4 3.4 1 23 394 416 394 416 0.97 7 11 0.0024 0.13 13.0 0.5 2 21 425 444 424 448 0.90 8 11 0.00041 0.023 15.4 0.4 2 23 454 476 453 476 0.95 9 11 8e-08 4.5e-06 27.1 2.8 1 23 482 505 482 505 0.97 10 11 4e-05 0.0022 18.6 4.5 1 23 514 536 514 536 0.97 11 11 8.3e-06 0.00047 20.7 2.4 1 23 542 565 542 565 0.97
Sequence Information
- Coding Sequence
- ATGTCTGCAATAAAATTCAGTATTGGTACCTTGTGTAATGTCTGTTTAAGTGTAGATCGTAAATTACAACATATAAGAAACTTTCCGGAAACAATAGAATGGATAAATATAGGGTTACAAATAGAGGATGCGGTTGTTTGTTGGGAATGTTTGGCAATAATGAGAAAAATTATTTTATTTAGGAAAAAAGTTGAAAATGCACAAACTATACTATACACTAATAATTTGATGACAGACATAAAATCATTCAGCACACTATCCACACATAATAATAAGCCTACAGACTTTGAAATATCATATGTCGAAGCAACCATCAAAATTAACCAAGTTGATATTAAAATAGAACCAACTGACAGCCCCAGTAACAAGGAAACTGGCGGACTAGATTTTGAAACTGGCGGACAAGATTATCAAATTGGCGGACTTGATTTTGAAACTGTCGGACAAGATTTTGAAACAGGCAGACTAGATTTTGAAACGGGCGGACTAGATTTTGAAACTGATAGGCTAAATTATGAAACTGATGAACAGAACAAGGAATATAATGAGACTGAGTTAAATGTACATGATAGTGGAGGTCAGGGTGAGGATATATTTGACCTAGGTAAAAAAGTTGATGAGGCAGCTTGTGCAGATATAGAGATAAGTAAGGATAACAAAGTATTATACAGCAAGAAGTACACTAGTATGCCTATATCATTAGAGGAGTTGCAACATATAAGGGAGAAAGAGAGGGGCTATAGTAAGTTTCAAAAGGCGGCAAGTAAATGCTCAAGTTGTGTCATTGTATTCTGTCAAAAGAAAGAGTTGGAACAACACAATGATATGTTTCATAAAAGGATAATAGGCGAACATATATGTAATATATGTGAATGTCGTTTTAACACACCCGAATCACTGCGACGCCATTTATCAAGTCATGAAACACAATACTCATGTGAGTTATGCCCTTATAGACATTATAGCGTTGATAATATGGAGGATCACATGCGGAGGAACCACGATAAGGATAATTATAGATGTTATAAGTGTGGAATGGATTTTTGCTCAAAGCGATCCCAAAAGAATCACATGTACACGGCGCACAGCGAGCCATGCACCTGCGACATCTGTGGGAAAATTATGAAATCAAGAATCAATTTGAAACAACACATAAGAATAACTCACGAGCAGGAAATATTTGATTGCAAATTTTGCGAAAAGAAATTCCGCGGACGAAAGAAACTCCAGTACCATTTACTGTCACATTCGAGTAGAGAGAAAGATTTATCATATTGCCCGGAGTGCGATATACAATTTGATAATAGATACAAATATAGAGTGCATTTGAAAGGAAATAAGCATTTGCAACCTGAGAGTGAATGTCAGTATTGCAGGAAGAAATTCGTTAATCGGCAATACGTCGAGAGACATATAGCTATAGTACATATGAATAAACTAGATTATAACTGTGATAAATGTGACAAGAAATTCAGTACATCAAGTAACTTGAAAAAACATTTAATAACAAAACACGAAGGAAAACAAGCTGATAGAAAACACATTTGTAATATATGCTCTAAGTCTTTTACTACCAAGCACGGCTTAAAAGGCCATTTAAATAGACACACTGGCGAGCGTCCATTCAAATGTGACCATTGCGAGAAGTCGTTCGCACAAAATGGTGGCCTTTACAAGCACAGACAGCGCGTCCATAAAGTTGGCAGACTTAAAGATATACCTAAAGAAATAATTATTGAAAATACATGA
- Protein Sequence
- MSAIKFSIGTLCNVCLSVDRKLQHIRNFPETIEWINIGLQIEDAVVCWECLAIMRKIILFRKKVENAQTILYTNNLMTDIKSFSTLSTHNNKPTDFEISYVEATIKINQVDIKIEPTDSPSNKETGGLDFETGGQDYQIGGLDFETVGQDFETGRLDFETGGLDFETDRLNYETDEQNKEYNETELNVHDSGGQGEDIFDLGKKVDEAACADIEISKDNKVLYSKKYTSMPISLEELQHIREKERGYSKFQKAASKCSSCVIVFCQKKELEQHNDMFHKRIIGEHICNICECRFNTPESLRRHLSSHETQYSCELCPYRHYSVDNMEDHMRRNHDKDNYRCYKCGMDFCSKRSQKNHMYTAHSEPCTCDICGKIMKSRINLKQHIRITHEQEIFDCKFCEKKFRGRKKLQYHLLSHSSREKDLSYCPECDIQFDNRYKYRVHLKGNKHLQPESECQYCRKKFVNRQYVERHIAIVHMNKLDYNCDKCDKKFSTSSNLKKHLITKHEGKQADRKHICNICSKSFTTKHGLKGHLNRHTGERPFKCDHCEKSFAQNGGLYKHRQRVHKVGRLKDIPKEIIIENT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -