Basic Information

Insect: Tinea trinotella
Gene Symbol: -
Assembly: GCA_905220615.1
Location: HG992334.1:2203540-2220535[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.5 2e+02 3.0 0.5 1 23 371 394 371 394 0.92

2 19 0.037 2.1 9.2 0.6 2 23 420 442 419 442 0.95

3 19 1.8 1e+02 3.9 7.9 1 22 464 485 464 487 0.90

4 19 0.0065 0.37 11.6 0.7 3 23 494 514 492 514 0.95

5 19 0.0017 0.093 13.5 3.4 1 23 519 542 519 542 0.94

6 19 0.027 1.5 9.7 1.0 2 23 548 570 547 571 0.95

7 19 0.0049 0.28 12.0 1.2 1 23 575 597 575 597 0.99

8 19 0.00027 0.015 15.9 2.1 1 23 603 625 603 625 0.94

9 19 8.4e-07 4.7e-05 23.9 2.8 1 23 631 653 631 653 0.99

10 19 0.00027 0.015 15.9 0.2 1 23 659 681 659 681 0.99

11 19 0.0041 0.23 12.2 1.0 1 23 1116 1139 1116 1139 0.94

12 19 0.11 5.9 7.8 1.9 3 23 1166 1187 1165 1187 0.94

13 19 0.61 34 5.4 4.5 1 22 1209 1230 1209 1232 0.89

14 19 7e-05 0.0039 17.8 1.4 3 23 1239 1259 1237 1259 0.96

15 19 0.38 21 6.1 0.9 2 23 1293 1315 1292 1316 0.95

16 19 0.00083 0.046 14.4 1.4 1 23 1320 1342 1320 1342 0.99

17 19 2e-05 0.0011 19.5 1.4 1 23 1348 1370 1348 1370 0.94

18 19 1.4e-05 0.0008 20.0 2.6 1 23 1376 1398 1376 1398 0.99

19 19 0.00047 0.026 15.2 1.6 2 23 1405 1426 1404 1426 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.5	2e+02	3.0	0.5	1	23	371	394	371	394	0.92
2	19	0.037	2.1	9.2	0.6	2	23	420	442	419	442	0.95
3	19	1.8	1e+02	3.9	7.9	1	22	464	485	464	487	0.90
4	19	0.0065	0.37	11.6	0.7	3	23	494	514	492	514	0.95
5	19	0.0017	0.093	13.5	3.4	1	23	519	542	519	542	0.94
6	19	0.027	1.5	9.7	1.0	2	23	548	570	547	571	0.95
7	19	0.0049	0.28	12.0	1.2	1	23	575	597	575	597	0.99
8	19	0.00027	0.015	15.9	2.1	1	23	603	625	603	625	0.94
9	19	8.4e-07	4.7e-05	23.9	2.8	1	23	631	653	631	653	0.99
10	19	0.00027	0.015	15.9	0.2	1	23	659	681	659	681	0.99
11	19	0.0041	0.23	12.2	1.0	1	23	1116	1139	1116	1139	0.94
12	19	0.11	5.9	7.8	1.9	3	23	1166	1187	1165	1187	0.94
13	19	0.61	34	5.4	4.5	1	22	1209	1230	1209	1232	0.89
14	19	7e-05	0.0039	17.8	1.4	3	23	1239	1259	1237	1259	0.96
15	19	0.38	21	6.1	0.9	2	23	1293	1315	1292	1316	0.95
16	19	0.00083	0.046	14.4	1.4	1	23	1320	1342	1320	1342	0.99
17	19	2e-05	0.0011	19.5	1.4	1	23	1348	1370	1348	1370	0.94
18	19	1.4e-05	0.0008	20.0	2.6	1	23	1376	1398	1376	1398	0.99
19	19	0.00047	0.026	15.2	1.6	2	23	1405	1426	1404	1426	0.96

Sequence Information

Coding Sequence: ATGGACCTAAAAGGTCCGCGTTCGTGTACTTGTTGCCTGTCTGAAGTGAAAACCGTAGTTCGGCATACTAATAGCCTATCGAAAAAGGATTTATTGGCTTTGGGTACAATTAAATGGCTCGATCAGGATGTGGCCTACGCAGATATGCTAAAAGAATGCTTCAAAATTAATCTGGCATGTGATGAAAATGATTTTTATATCTGCAGTGATTGTGTACCAAGTCTTAAAGATGCACATAGCTTTAAGGATAAAGTTATGAAAAGTCAACAGCATTTGTTATCAAGCAGTAGTAACTTATTAACAGCAAAAGATAATTCTGAAGCTGAAGAAGTCCAGTCAGTTAAATTTGAGATTGAAACTATTAATGACTCGGATGATGCTTGTTACTTAGATGAAGATGATTATAGTTTACCAGTTGAAGAAATCCAACCATTTAAGAATGATAATATTATTAATTTAGATGATGACTGTTTTGAAAGTGAAATTAAGACAACAGAATCCAAAGCAATAACTCCACTAGAGAAACCGCCTGAAGAACCAAAACCTTTAAAAAGTGTACCAGAATTTAAACCGAAGGTGATAAAAGTTGAATCGTTGAACAAACCAAAGAGTCAAGCTTCAATCTCAATCCCGCAGTTCAATCCCGCAGTTCAGAACTTAACAAAATTAAATAGCATAACGATCAAGCGATTGCCTACACGAAAAGTTGGTTCTGTCAGACCTACATCCCTAGACAATGATGTGAAACGGAAAAAAATGCTTAAGCTAGGTGAAGAAATTACTGTAAGAGAAGATTTACGTATAGTAAAACCACAGGAGAAACCGTCTGCAAAATCAAACTATTTGGAGATTTCTTCAAAATCGAAACCAATTAGTAAAAGCCAATTAAAAGATTCGAAAACAGAGAAAAGTGGATCTAACGATAGTTTAGTTAGGGATAAGAAAGACGAAGACTTAGACGACGATGAGTTTGAAGACTGGGTTGCTCATGATGAACAAATTAACAAATCGGCCACATGTTCTCGTCGGGTTTTGCCGCAGCTACGACAGCTATTTATAAACGTTTTAACTCGAACGACTGGTACACCATTCAAATGGCGTACGAGCAAATTTTCGTGCATCTATTGCAGGCTTTCCTTCTTAAAATGGATAGATTTTAAAACACACATGGACGTTGATCACGTCGATATTAATTACGATACGTTTGTAAATAAAATCACTAACGAACACTTTATTTCTTTGGATATTAAAAATAATAAATGTAGGGATTGTAATAATGAATTCGAGAATCTAGAGCAGTTTATTCAACATCTTAAAGACGAACATGATTGTAATTTTAAACGAGATTATCGTGAGCATTTAATTCCGTTGATTATTAATGATTCCAACTTTGAATGCGATTTTTGTAAATGTACTTTTGAACAGCATCACCTCCTCTATAGGCATGCATTCCAAAATCATTTTAAAGCCAGACATCTTTGCCAGTACTGCGGCAAAGGGTATGACATGAAGAATAAATTGATCTTGCATATTGCATCACATAGTAACAAAGGTTTTAAATGCAAGATTTGCAATGAGATTTTCTCAACCCATTCCAAATATCGATACCACTATATATTAGTGCACAAAGAGAAAACAATTAAATGCTCGGAATGTAACGAGTTTTTTGCTAATGCTACGTTGAAAAGAATACACGAAAGGTCTATTCACCATAAAAATTGTTTCAAATGCGATATATGCTCGAATGAGTACGCTAGTAGAATATCTCTGAAGTATCACCAAAATAAACATACAAAGAAAATTAAGTATCCATGCACCAATTGTGATAAAATCTATTACACAAAATCGAGTTTGCGACATCATTCCGTTGTACATTTAGAAGATAAGCCATTTCAATGTGATTATTGCACAAAAAAGTTTTCGACTAAAATGTATTTGGAAAAACATATTAGGATCCACACAAATGATAGGAGATATGTATGTGAAGTATGCGGTGATGCCTTCATACAAACTACCAGCTTAAAATTGCATATGAAGAAACATGCTAAGTTACATAAGGCAAGGATAATAACAAATAAAAAGAATGTGAATGTGGTTAGGGATTCAAATGGTGATTTAGTGACTGAAGAGAAGAAAGTTATAGGACTATGGAAGGAGTATTTTGAAAGTTTATTTGTGGGGGATGATGATACAGCACCAGAGTGTGTTGATGTTTCCTCCACGCTGAATGAAAGTGAATTTGAATGTGATATAGGTGTGAAAGAGATTTTGAATGCATTAAAAAGAATGAAAGTTGGAAAAGCGGCTGGGTGTGACAGAATAACTGTCGAGATGCTGAAGGGCGGTGGTCAGCTGGTGGCTTCCTGGTTGTGTCTCCTTTTTAGTAAGTGTTGGGTGAACGGTCGTGTCCCAGGTGACTGGCGCAAGGCTGTCATAGTGCCACTGTACAAGGGGAAGGGGTCACAACAGGAACCTAAAAATTACCGCGGCATCAGCCTTCTCAGTATTGTTGGCAAGTTGTATGCGAAAGTATTGATTGAAAGGGTGATGCATGAAACAGATGATAAAATTTGGGATGCGCAAGCGGGATTTAGGAAAGGGATGGGATGTATGGATCAAATCTTCTCTTTAAGATGCGTCAGCGAAAAAGTGTTGGCAAAACACCAGAAGGTGTTTTGTGCTTTTGTTGACCTTGAGAAGGCCTATGATCGAGTGAACAGGAGTGAATTGTGGCAGCAGCTGTCCGGGTTTGGGTTGGAGGAGCGTTTGGTCCGTGCACTGAAATCTCTCTATGAGGATTCCAGTGCATGTGTTCGAATTAATGGGGCGCTATCTGACTGGTTTGGCATCTCTAAAGGTGTCAGACAGGGATGTGTAGCGTCACCATGGCTCTTCAATCTATTCATGGACAGTTGTCTGAAAGAGTTGCGTGAAAGGAAGTATGGTTTAAGAATGAATGATTTGGTGATCAAATGTCTCTTGTACGCCGACGATCAAGTTATCCTTGCATCTTCGGCGTATGAGTTACAGGAAATGGTTACTATAATGAATGCGGAATTAGAAAAGAAAGGTATGAAAGTGAATGTAAGTAAAACTAAAGTAATGGTTTTGGAGAGAGAGGATGAAATGACAGAATGTGAGATAATGATAGACGGAAAGAAAGTGGAACAAGTCAAACAATTTGTTTACTTGGGAAGTATGTTTACTAGGGATGGAAAGTGTGATGAAGATATTGAGAGAAGAGTGCAAAAGGATTGGCGTCCGAAAACGAAGCAGCTTCGTTATTTATTCACAAACGTTTTATCACGATCGACTGGTACGCCTTTTAAATGGCGTACGAGCAAATTTGCGTGCTTGTATTGCAAGTTAACTTTCTTTAAATGGACAGATTTCAAAACCCATATGGCTCTTGTCCACATTGACATAAATTACGAGGCAACATTTAAAAAAATCTCCAATAATTACTTTATTTGTATTGACATTAAAAATAATAATTGTAGGGTATGCAGTAAACAATTCGAGCATGTAGACCAATTTATGCAACATCTGAAAGATGAACATGATTGTAATTTTGAACGTGACTATCGTGGGCATGTACTTGCATTTATTATTAACGATTCAAACTTTGAATGCGCTTATTGTCATCTTAAATTTGAAGAGTATCAACACCTTTATAGGCATGCATTCCAAAACCATTTTACCCACAAACATCTCTGCCAGTATTGCGGTAAAGGATTTGAAAATAATATTTGGTATCGCATCCATATGAAGACTCATAGTAACGAAGTTTTTAAATGTGATCCATGCAATATTATATTTTCCACTTATTCCAAACATAGGTACCACTTTCTAGAAGTGCATAAAGAGAGAACTGTTAAATGCTCGGAATGTAGCGAGTTGTTTGCTAATGCAACATTGAAAAGATCACACGAAAGGTCTGCCCATCATAAAAATTGTTTCAAATGCGATGTATGCTCGAAAGAGTTCGCTGGAAGAATGTCTTTAAAGTACCACAAAAATACACATACTAAGGAAATTCAGTATCCATGCAGCAATTGTGACAAAGTCTTTTACAGAAAATCGAATTTCAATGTTCATAAAGTACTACATTCTAATGATAAACCATTCCAATGTGATTATTGCATGAAAAAGTTTTCATCTAAAACGTATTTGGAAAAACATATTAGGATCCACACGAACGATAGGAGATGTGTATGTAAAGTATGCGGTGATGCCTTCATACAGAACACCAGCTTGAAATTGCATATGAAGAAACATGCTAAGTTAGAGAAGACAAAGGTGTAA
Protein Sequence: MDLKGPRSCTCCLSEVKTVVRHTNSLSKKDLLALGTIKWLDQDVAYADMLKECFKINLACDENDFYICSDCVPSLKDAHSFKDKVMKSQQHLLSSSSNLLTAKDNSEAEEVQSVKFEIETINDSDDACYLDEDDYSLPVEEIQPFKNDNIINLDDDCFESEIKTTESKAITPLEKPPEEPKPLKSVPEFKPKVIKVESLNKPKSQASISIPQFNPAVQNLTKLNSITIKRLPTRKVGSVRPTSLDNDVKRKKMLKLGEEITVREDLRIVKPQEKPSAKSNYLEISSKSKPISKSQLKDSKTEKSGSNDSLVRDKKDEDLDDDEFEDWVAHDEQINKSATCSRRVLPQLRQLFINVLTRTTGTPFKWRTSKFSCIYCRLSFLKWIDFKTHMDVDHVDINYDTFVNKITNEHFISLDIKNNKCRDCNNEFENLEQFIQHLKDEHDCNFKRDYREHLIPLIINDSNFECDFCKCTFEQHHLLYRHAFQNHFKARHLCQYCGKGYDMKNKLILHIASHSNKGFKCKICNEIFSTHSKYRYHYILVHKEKTIKCSECNEFFANATLKRIHERSIHHKNCFKCDICSNEYASRISLKYHQNKHTKKIKYPCTNCDKIYYTKSSLRHHSVVHLEDKPFQCDYCTKKFSTKMYLEKHIRIHTNDRRYVCEVCGDAFIQTTSLKLHMKKHAKLHKARIITNKKNVNVVRDSNGDLVTEEKKVIGLWKEYFESLFVGDDDTAPECVDVSSTLNESEFECDIGVKEILNALKRMKVGKAAGCDRITVEMLKGGGQLVASWLCLLFSKCWVNGRVPGDWRKAVIVPLYKGKGSQQEPKNYRGISLLSIVGKLYAKVLIERVMHETDDKIWDAQAGFRKGMGCMDQIFSLRCVSEKVLAKHQKVFCAFVDLEKAYDRVNRSELWQQLSGFGLEERLVRALKSLYEDSSACVRINGALSDWFGISKGVRQGCVASPWLFNLFMDSCLKELRERKYGLRMNDLVIKCLLYADDQVILASSAYELQEMVTIMNAELEKKGMKVNVSKTKVMVLEREDEMTECEIMIDGKKVEQVKQFVYLGSMFTRDGKCDEDIERRVQKDWRPKTKQLRYLFTNVLSRSTGTPFKWRTSKFACLYCKLTFFKWTDFKTHMALVHIDINYEATFKKISNNYFICIDIKNNNCRVCSKQFEHVDQFMQHLKDEHDCNFERDYRGHVLAFIINDSNFECAYCHLKFEEYQHLYRHAFQNHFTHKHLCQYCGKGFENNIWYRIHMKTHSNEVFKCDPCNIIFSTYSKHRYHFLEVHKERTVKCSECSELFANATLKRSHERSAHHKNCFKCDVCSKEFAGRMSLKYHKNTHTKEIQYPCSNCDKVFYRKSNFNVHKVLHSNDKPFQCDYCMKKFSSKTYLEKHIRIHTNDRRCVCKVCGDAFIQNTSLKLHMKKHAKLEKTKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -