Ttri014782.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- Zfa
- Assembly
- GCA_905220615.1
- Location
- HG992308.1:10830714-10839422[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1 56 4.7 3.9 3 23 210 231 209 231 0.95 2 23 0.0063 0.36 11.7 0.8 1 21 607 627 607 628 0.96 3 23 7.4 4.2e+02 2.0 2.2 1 23 671 694 671 694 0.86 4 23 0.048 2.7 8.9 1.4 2 22 704 724 703 724 0.94 5 23 0.14 7.6 7.5 0.2 2 23 732 754 731 754 0.91 6 23 0.005 0.28 12.0 0.1 3 23 776 797 774 797 0.97 7 23 1.9 1.1e+02 3.9 1.9 1 23 803 826 803 826 0.89 8 23 0.12 6.9 7.6 0.0 1 22 851 872 851 874 0.90 9 23 0.0013 0.076 13.8 1.6 1 23 879 901 879 901 0.97 10 23 0.014 0.82 10.5 0.1 1 23 907 930 907 930 0.96 11 23 0.00033 0.018 15.7 0.8 1 23 941 963 941 963 0.98 12 23 0.0013 0.072 13.8 4.0 1 23 1012 1035 1012 1035 0.96 13 23 0.0023 0.13 13.0 1.8 1 23 1090 1113 1090 1113 0.96 14 23 0.0022 0.13 13.1 2.2 2 23 1140 1162 1139 1162 0.95 15 23 0.077 4.3 8.2 0.1 2 23 1168 1190 1167 1190 0.93 16 23 0.0085 0.48 11.2 0.2 1 21 1237 1257 1237 1258 0.95 17 23 0.001 0.058 14.1 0.5 1 23 1266 1288 1266 1288 0.93 18 23 7.8e-05 0.0044 17.7 0.6 2 23 1373 1395 1372 1395 0.93 19 23 1.3e-07 7e-06 26.4 1.3 3 23 1402 1422 1401 1422 0.98 20 23 0.37 21 6.1 3.3 1 23 1446 1468 1446 1469 0.94 21 23 0.26 14 6.6 0.0 1 23 1490 1512 1490 1512 0.97 22 23 0.25 14 6.6 2.7 1 23 1518 1541 1518 1542 0.94 23 23 1.7e-05 0.00095 19.7 0.7 1 23 1549 1572 1549 1572 0.96
Sequence Information
- Coding Sequence
- ATGAGTATGAATTTTGAGTGCGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTATCGCCGATTTTTCCTACCACCAGTGCGGATGACCCGGGATCCGCCGTCCTGGCAACTAAAATCAAGGACTGTGTCTCAGTAAACATTAATGAGGATGACGAACTACCAACGAACGTGTGCAAGAAATGTTTGGACAATGTCAATAACTGGCAGGTATTCAAGGATATATGCGAAAAGGCGCAAAACAAATTACAATCATTGAAAAATGATAGCAGCCTACTTGAAGAGGTAAAAGTGAAAGCTGAACTTCCTGAGGATGCATATGATGATGGAGTTGTTATTGATGGCTCCTATCCTGATTTTGAAGAGAATGTGACAGATTCAAATAAATTGCAGCCAGAAGGCCCTCCTATCTTGACTTCGCTGGGACTCACACCGAGGAGTGATAAGGGTGGTGAGACTGATAAAGAAGATGAGGAAGAAATGGCAGAGGGAGAGGAAGAAGAAGAAATGAATGAACAACAATTCGCCAAAGTATCATCAATGCCCGAAGTATCTATTACTGTGATGCGACCATCAGGTGAAACTCTCCACTCACGGCAGGGCATTCAGCAACTTGCGTCCAAACACTGTCTCGTATGCAGTCGAGAGTATCGTTATTCTCACAATGCGCGTAGACATGAACTCACTTCACACAATTTTGATCGCTATACTAACAAAGTTGTTCCTAAAAAACCGAAGCTACGTCCAAACCCATTTAACCCTAAAGCAAGACTAATGCCAAATTCAGGTACTAAAATGCAATTTTCTAAGGCGATGCCCTCGAAAATGGTGCCACATAAAGTTATTCCACAACCAAAAGCTATACCCATTCCCATAAAACCACTTCAAAATAATTTACCATATCCGCTAAGGATAAAAGCATTGAAAGATCTACAAATAAAGAAAAGAGAACCCCAAATATTGAAAACTCTTTTGACTAGTAGGCCCGAAATATTGGTTGCAGAGCCCGAGATTATCAATTCTGAACCTGGCAGTCCAGAGACTTTAATTTCGGAACCGGAAATTGCATCTTTTCAAGTAGAAACAATTTTGTCTGAGCCTGACACCTTTGACCATCCAATTCATGATGATGAAATGTATGATAATACTATGCCTAAAATAAAGACATATGGTACTGTTGACGTTGAATCAGATAATGATTTAGAAAATGCTAGAGAAGAGACTGACAATGCTGAAATTACGACAGATAAAGCAAATGACGTCAATGAAGAACCTGAGGAACCGATGGATGTATCAAACAAAGTAAGTGACAATGAGAATAATAATGATGACAACGATACTCAAGAAGGTGATGAAAATCAAAAAGATCCACTAAAAAGTATTGAAAATTCCGAAGGCGAGGAGGCTGCTGAGAACGTAAACCAAGAGGTTAATAATGATGAACATAATGAAGAAAATATGGACAATGAACAAGGAATCAATTCATACGAAAATGACGATGACGACGATGAACCTCCGTTAACAATCGCACCAGTTGTAGAAATTAATGAAGATATGAATACAACTGAGGAAAATAATGTCAGTTATGAAGGTGAAATGGGTGAGATGGATGAATCGGGGACCTATGATGATACAGTTGAAGAAAAAGTGGAAATAGATCCTATGAGTATCACACCTGCACAAAGGGAGTTTATTGCTAAATATCGCGACATTATAGAACAGATTAACACCCAACGCTGTTTGTGTTGTGATAAACAGCACCCACGTAGAAAGGCCGTTATTCAGCATTTGCAAAAGAATGGCCATAAAGTACCCAAACACACATGTTACAATTGCGTCTACACTTTCAGCCATCTTGGTGCTCTGCTCAGTCACATGAGGGCCAATGTCTGTACAAATCTATGGAGAGTGATTTATAATCCAGATCCCCTCATGGCAGCCATGCTAGCGAAGAAAGAAGTAATTCGGGATAATAAATTTATTTACAAGGATCTTTTTAGTTCAAGATCGTATGCGTGCAAGATATGCCACTCAAAATTCCAGCTGAAACAATTTATAATGAAACATATCACAGACATGCATGAGGATGGTCAGTCCATGGTTCCCCTTGTTTGTGTACATTGCCGCTCAAGGTTCAAAGACAGGTCCATGTGGAAGAAACATGTTCGTAGAGGAGAATGCATAATATATGTATCATGTAATTTGTGTAGTGAAAAGTTTCCCACGGTGCATGATTTCAACGAACATGTCATTGCAATACATGCAGGTGAAACTTCTCAAAACAACAGTAATCAGGCGAAGAACATTGATGATAGGCCAACAGACTGCCCAATTTGTGGCCAGAGCAATAGTCAATATGCCTCTCTAGTGAAACATTTAAAAACAGTCCATGGTGAAGATAGACCACACTATTGCCAGCATTGCGATGCTAAATTTGAACTTACCCCTGAACTAGACCAACATCTGTATCAGGAGCACTCTGACAAAACACTAAGTACTTCTCAAGAGATTGATACTTCTATTGTTAAGGAGGAGGTGGAAGAATATCATTATTCTTGCACAGAATGCAACGCTATATTCGAAACTGTTGACGCCTGGACCGATCATCAAGTAGATGAACATAATCAAATCGCTCACAATTGTGACCAATGTGATAAGAAGTTCTTACGCCCATCAGAATTGGCTGAACATAAAAATACCCATTTACGAGTGAAGTTCTATCCTTGTGGTTACTGCCCAGATTCATACAATTCACCACAGAAACTGACTGAACATATCCAGCAATCACACCCAAATGAGTTGGGAGGTATTGGGCCCGAGTTCTCATGCGATATATGCGTCAGAGATTTTAAAAGCCGACAAGCGTATTCTAATCACATGCGTATTCATTCTAAAGTACCCACTCATAACCGGAAACCTGTACCAACGAAAGGATTTTCACCGCAGATCATAGGTAAACCAATAAAACAGTTTTCCTTACCAACGGGTATCAATATACCGTTTAAGACTAACTTGACCGTTCCCAGTGCACCGTATTGTTGCGATATTTGTGGTAAAGGGTTCATGCACAAGAAAAATATTTGGAAACACAAAAAAGTATTGCATGCGGACATCGTTGGAGAAAGGGTTGACAATGAAGAAGCTACTGTACAACATGCGGAAGAAGATGACATTAACTATGACGAGAATGGAATAGGTTTGACAACACCACAGTTCGATAGTTTCAACTTTGCTGATTTTAGCAACAATCCTCAGGATGCAGTGCAGTATACGTGTGAATTGTGTTATAAGAAATTCCCACTGAAGAACAGTTTGTGGAAGCACAAACGCGCCAAACATGGAATTGTCAACACATTAACCAGCAGTTCGGATAATACTAGAATCGTACCTTACACTGGGGATGAGGGAAGAAGGTCAAGCTGTACCATTTGTAAAATAACATTTAATGACAAGAAATCATATTACAGACACAGGAAAAATGTTCACAAATCAAACGTGCAAATGTGTAAAATTTGTGGCAAACCCTTGAATTCTACTCTGGAGTTGTATGAACATTTGAAAGCTGCGCATGCCCGGGAACTGTTGGGTTACAACGCCAACCAAGGTAGCAGCAAAACGCAGGATGTTCAAGTGCCTGTTAGAGAGGAGATGGAAATGGAAGAGGATTACGATGCTAGTAATGATCCCGCTGCAGAATATCAAGCCCACTACCCTTGTGATACTTGCGGTAAACAATTTGTTGGTCTGTTGGCGTTGCAGAATCACCAATGTGTCAGTTCGTCACAACCGCAAACGTTTGACTGTGAAATATGCCATAAGAGCTACTCATCGATAGCGGCACTCAAGTCGCATAGGGGATGGCACTTGCGTTCGCCAGATGGAAAAGCCGCAGCCACCAATTCAGGTCTTTGGATGCCTCAACATAAAGTGACAAGCAAAGTTAGCAAACATGAAATATTGGACGCTGCCCAACTAGCTCGGGTCACCATGCCGTCCGTGGCCTCCGTGGCATCTAGGAGGTTGCCCCCTGAAGTCGAAGTCACTGTCGTAAATCCTAACAAGAAAATGCGTTCCGACGATTCCATCGATTATGACCCGTCCTCCTCCGAAGACAAGTATTGCAAAATATGCGACAAAGAATTTACAAAGCGAGCTGCTTATCAGAGACACATGGACGAAGTTCATCAACCCAATTCGGTTTTCTGTCCAGTCTGCGATAAAAGTTTCACACGTAAGTCTACACTGCTCGTGCACATGAGAAAGCATTACGGTGACGAAGACGGCGCAGGTTCAGCGGGTGGTTCTAACGCTTCCCCCGTTGCCGACGCAGAGTACCATTCGTGTGACCTCTGCGGCGCACAGTACCATTCGATTAAAGCGCTCAAAGCTCACCGTGCTCGTCATCACGGCGAGGTGGCCTCCGAGTCTGAAGAAGACGACGTCATGCCTGTCGCGCAGCCTGGTGAATTTACATGCGCTCAGTGCGGCGACGGTGTTGCCACACCTCGTGACCTCTTGGCCCACCGCACCATGCACTGCACACCTTCTCAGTTCTTCTGTACTGTATGCAAGGTATATTTCAGCAGTGGTAATAATTTCTCTGCACACACGCGCGCACGCCACCATGACAGCGAAAAGGTTATCTTCCCCTGCGGCATGTGTGATCGCCAATTCTCGAACAAAAAGAGTTTACAACGACATGTAGAGATGTCCCACTGA
- Protein Sequence
- MSMNFECVCRLCLSSRGELSPIFPTTSADDPGSAVLATKIKDCVSVNINEDDELPTNVCKKCLDNVNNWQVFKDICEKAQNKLQSLKNDSSLLEEVKVKAELPEDAYDDGVVIDGSYPDFEENVTDSNKLQPEGPPILTSLGLTPRSDKGGETDKEDEEEMAEGEEEEEMNEQQFAKVSSMPEVSITVMRPSGETLHSRQGIQQLASKHCLVCSREYRYSHNARRHELTSHNFDRYTNKVVPKKPKLRPNPFNPKARLMPNSGTKMQFSKAMPSKMVPHKVIPQPKAIPIPIKPLQNNLPYPLRIKALKDLQIKKREPQILKTLLTSRPEILVAEPEIINSEPGSPETLISEPEIASFQVETILSEPDTFDHPIHDDEMYDNTMPKIKTYGTVDVESDNDLENAREETDNAEITTDKANDVNEEPEEPMDVSNKVSDNENNNDDNDTQEGDENQKDPLKSIENSEGEEAAENVNQEVNNDEHNEENMDNEQGINSYENDDDDDEPPLTIAPVVEINEDMNTTEENNVSYEGEMGEMDESGTYDDTVEEKVEIDPMSITPAQREFIAKYRDIIEQINTQRCLCCDKQHPRRKAVIQHLQKNGHKVPKHTCYNCVYTFSHLGALLSHMRANVCTNLWRVIYNPDPLMAAMLAKKEVIRDNKFIYKDLFSSRSYACKICHSKFQLKQFIMKHITDMHEDGQSMVPLVCVHCRSRFKDRSMWKKHVRRGECIIYVSCNLCSEKFPTVHDFNEHVIAIHAGETSQNNSNQAKNIDDRPTDCPICGQSNSQYASLVKHLKTVHGEDRPHYCQHCDAKFELTPELDQHLYQEHSDKTLSTSQEIDTSIVKEEVEEYHYSCTECNAIFETVDAWTDHQVDEHNQIAHNCDQCDKKFLRPSELAEHKNTHLRVKFYPCGYCPDSYNSPQKLTEHIQQSHPNELGGIGPEFSCDICVRDFKSRQAYSNHMRIHSKVPTHNRKPVPTKGFSPQIIGKPIKQFSLPTGINIPFKTNLTVPSAPYCCDICGKGFMHKKNIWKHKKVLHADIVGERVDNEEATVQHAEEDDINYDENGIGLTTPQFDSFNFADFSNNPQDAVQYTCELCYKKFPLKNSLWKHKRAKHGIVNTLTSSSDNTRIVPYTGDEGRRSSCTICKITFNDKKSYYRHRKNVHKSNVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTQDVQVPVREEMEMEEDYDASNDPAAEYQAHYPCDTCGKQFVGLLALQNHQCVSSSQPQTFDCEICHKSYSSIAALKSHRGWHLRSPDGKAAATNSGLWMPQHKVTSKVSKHEILDAAQLARVTMPSVASVASRRLPPEVEVTVVNPNKKMRSDDSIDYDPSSSEDKYCKICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMRKHYGDEDGAGSAGGSNASPVADAEYHSCDLCGAQYHSIKALKAHRARHHGEVASESEEDDVMPVAQPGEFTCAQCGDGVATPRDLLAHRTMHCTPSQFFCTVCKVYFSSGNNFSAHTRARHHDSEKVIFPCGMCDRQFSNKKSLQRHVEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -