Ttri010366.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tinea trinotella
Gene Symbol
-
Assembly
GCA_905220615.1
Location
HG992332.1:2314769-2331693[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 56 0.00026 0.015 16.0 0.2 2 23 253 274 252 274 0.97
2 56 0.00072 0.041 14.6 0.4 1 23 280 302 280 302 0.99
3 56 0.00036 0.021 15.5 0.2 1 23 308 330 308 330 0.99
4 56 0.028 1.6 9.6 0.3 1 23 336 358 336 358 0.99
5 56 0.00036 0.021 15.5 0.2 1 23 364 386 364 386 0.99
6 56 0.028 1.6 9.6 0.3 1 23 392 414 392 414 0.99
7 56 0.00024 0.014 16.1 0.3 1 23 420 442 420 442 0.99
8 56 0.028 1.6 9.6 0.3 1 23 448 470 448 470 0.99
9 56 0.00036 0.021 15.5 0.2 1 23 476 498 476 498 0.99
10 56 0.00026 0.015 16.0 0.2 2 23 576 597 575 597 0.97
11 56 0.00072 0.041 14.6 0.4 1 23 603 625 603 625 0.99
12 56 0.00036 0.021 15.5 0.2 1 23 631 653 631 653 0.99
13 56 0.028 1.6 9.6 0.3 1 23 659 681 659 681 0.99
14 56 0.00036 0.021 15.5 0.2 1 23 687 709 687 709 0.99
15 56 0.028 1.6 9.6 0.3 1 23 715 737 715 737 0.99
16 56 0.00024 0.014 16.1 0.3 1 23 743 765 743 765 0.99
17 56 0.028 1.6 9.6 0.3 1 23 771 793 771 793 0.99
18 56 0.00036 0.021 15.5 0.2 1 23 799 821 799 821 0.99
19 56 0.0014 0.076 13.8 0.4 1 23 827 849 827 849 0.99
20 56 0.0096 0.54 11.1 0.7 1 23 855 877 855 877 0.98
21 56 0.017 0.97 10.3 0.8 1 23 883 905 883 905 0.98
22 56 0.0004 0.022 15.4 0.3 1 23 911 933 911 933 0.99
23 56 0.00024 0.014 16.1 1.3 1 23 939 961 939 961 0.99
24 56 2e-05 0.0011 19.5 0.7 1 23 967 989 967 989 0.98
25 56 0.00056 0.032 15.0 0.5 1 23 995 1017 995 1017 0.98
26 56 0.015 0.83 10.5 0.5 1 23 1023 1045 1023 1045 0.99
27 56 0.00034 0.019 15.6 1.1 1 23 1051 1073 1051 1073 0.99
28 56 0.019 1.1 10.1 0.2 1 23 1079 1101 1079 1101 0.99
29 56 0.0083 0.47 11.3 2.7 1 23 1107 1129 1107 1129 0.99
30 56 0.00073 0.041 14.6 0.8 2 23 1191 1212 1190 1212 0.97
31 56 0.0013 0.071 13.9 3.5 1 23 1218 1240 1218 1240 0.99
32 56 0.00025 0.014 16.1 1.4 1 23 1246 1268 1246 1268 0.99
33 56 0.001 0.059 14.1 2.7 1 23 1274 1296 1274 1296 0.99
34 56 0.0024 0.14 13.0 0.4 1 23 1302 1324 1302 1324 0.98
35 56 0.00041 0.023 15.4 1.1 1 23 1330 1352 1330 1352 0.99
36 56 0.0032 0.18 12.6 0.4 1 23 1358 1380 1358 1380 0.98
37 56 0.0013 0.075 13.8 0.4 1 23 1386 1408 1386 1408 0.98
38 56 0.00041 0.023 15.4 1.1 1 23 1414 1436 1414 1436 0.99
39 56 0.0006 0.034 14.9 0.8 1 23 1442 1464 1442 1464 0.99
40 56 0.61 34 5.4 1.4 1 23 1470 1492 1470 1492 0.96
41 56 0.0022 0.12 13.1 2.2 1 23 1498 1520 1498 1520 0.99
42 56 8.6e-05 0.0048 17.5 1.3 1 23 1526 1548 1526 1548 0.99
43 56 0.00018 0.01 16.5 2.4 1 23 1554 1576 1554 1576 0.98
44 56 0.002 0.11 13.2 0.8 1 23 1582 1604 1582 1604 0.99
45 56 8e-05 0.0045 17.6 1.2 1 23 1610 1632 1610 1632 0.99
46 56 6.2e-05 0.0035 18.0 0.9 1 23 1638 1660 1638 1660 0.99
47 56 6.2e-05 0.0035 18.0 0.9 1 23 1666 1688 1666 1688 0.99
48 56 0.011 0.62 10.9 0.7 1 23 1694 1716 1694 1716 0.99
49 56 0.0024 0.14 13.0 0.4 1 23 1722 1744 1722 1744 0.99
50 56 0.00015 0.0085 16.8 1.1 1 23 1750 1772 1750 1772 0.99
51 56 0.15 8.2 7.4 1.3 1 23 1778 1800 1778 1800 0.96
52 56 0.00094 0.053 14.3 3.3 1 23 1806 1828 1806 1828 0.99
53 56 0.0001 0.0058 17.3 2.1 1 23 1834 1856 1834 1856 0.99
54 56 9.4e-05 0.0053 17.4 2.0 1 23 1862 1884 1862 1884 0.99
55 56 0.00018 0.0099 16.5 1.1 1 23 1890 1912 1890 1912 0.99
56 56 0.019 1.1 10.2 1.7 1 23 1918 1940 1918 1940 0.99

Sequence Information

Coding Sequence
ATGATGTATCACAAAGGCGGTGTCCTTGGGTCAGATGACGTAGAATCTGACCCCATTTACCAAAAGTCTAAAGGAGGCCAACAAGAACCCGAGGAACCATATTCTCCCTTGGTGTCTGACTATGCTCCAAGTTCTGAATGCAGCTCATCAGATTCTGAAGAACAGATCCACAAGCCTATTGTTGCGTCAACTCGCAGTAGGAGTCTCATGTGTAATCGTCAATTGACTCCAACGCGAAATATAGCTCTATCTACTTTTTCAACGCCCGAACCATTTAAGAATGTTTTGACCTTAGTTAGGTCTCGTGTTCTGGAAAGTAATTCCTCAGAACTAGATGTTGACATACCCTCGACATCTAGTCCTACCATATTTGATTCATTGTTAGACGTACCTTTTATAGCATCCACAGATGCTAATAATTTAAAATTAAACAGTAATACCACCGTAAATGATTTTCAAATCGAAAGCCCTAAACAACAAAGAAGAAGAAAACGAGAAAGAAATGAATTGAAATGGCAGCGGAACGTCAGCAAAAAAAGGAGCTACAATGAAGTAACTGAAGGATTCGTATTGACGGAAGATGAAAAATTTGCTTGTACAAGTTCGGAAGTTTACACAAACATAGGAAAATGTAGCTCTGATGAATTACCACCTAAGAAATCAAGCTTTAAACCACCATTTAAAAAGAAGAAAACACATGAAAGCGAAGAAAGTTTAGAAACACGAATTAGGAAATCAACGGTTAAACAAGTACTTAAATGTGAGCTATGTGATTATAAGGCAACAAATAACAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGCGAGCTATGTGATTATAAGGCAAGAGATAAAAAAGCATTAGGTAAACACATTCGTATACATACAGATGAAAGACCGTTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTTCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGCAAAAAAAGGAGCTACAATGAAGTAACTGAAGGATTCGTATTGACGGAAGATGAAAAATTTGCTTGTACAAGTTCGGAAGTTTACACAAACATAGGAAAATGTAGCTCTGATGAATTACCACCTAAGAAATCAAGCTTTAAACCACCATTTAAAAAGAAGAAAACACATGAAAGCGAAGAAAGTTTAGAAACACGAATTAGGAAATCAACGGTTAAACAAGTACTTAAATGTGAGCTATGTGATTATAAGGCAACAAATAACAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGCGAGCTATGTGATTATAAGGCAAGAGATAAAAAAGCATTAGGTAAACACATTCGTATACATACAGATGAAAGACCGTTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTTCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGATCTGTGTGATTATAAGGCAATAGATAAAAAATCAATAGGTAAACACATTCGTATACATACAGATGAAAGACCATTTAAATGTGAGCTTTGTGATTATGCGGCAAAATCTACAAGTGCATTAGTAAGTCATATTCGTACACATACAGGTGAAAAACCATTTAAATGTGAGCTATGTGATTATAAGGCAATAGATAAAAAATCATTAGGTAAACACATTCGTATACATTCAGGTGAAAAACCATTTATATGCGATCTATGTGGTTTTAAGACAAAACTCAAAATATATTTAGTAAATCATATTCGTAGACATAGAGGAGAAAAACCATTTAGTTGCGATTTTTGTGAATACAAGGCAACAGTTAAATACGCTTTAAAATTACACATTCGTAATCATACAGGTGAAAAACCATTTAAATGTAACATATGTGATTATAAGGCAGCAGTAAAAGGTACACTACTACAGCACATACGTACACATACAGGCGAAAAACCATTTAAATGTCACCTATGTGATTATAGGGCAACTAATAATAGTGCAGTAATAAATCATATTCGTACACATACTGATGAAAAACCATTTGAGTGTGATCAATGTGATTATAAGGCAAGAGAAAAAAGTAATTTAATAAGACACATTCGTACACATACAGGTGAAAAACCGTTCAAATGTGAGCTATGTAACTATAAAGCAACAGATAAAGGGACATTACTAAAACACATTCGTGCACATACAAATGAAAGACCATTTAAATGTAAGTTTTGTGATTATGAGACTGCATGGAAGGGTACATTAGTAAGACATATTCGTATACATACAGGTGAAAAACCATTTACATGTCACCTATGTGATTATAGGGCAACTAATAATAGTGCAGTAATAAATCATATTCGTACACATTCTGATGAAAAACCGTTCAAATGTGAGCTATGTGATTATAAGGCAGCAGAAAAAGGTAGATTACTAATGCACATACGTACACATACAGGTGAAAAACCATTTAAATGTCACCTATGTGATTATAAGGCAGCAGAAAAATATAGATTACGACTACACATTCGTACACATACAGTTAAGAAAAGGAGTCACAATGAAGTAACTAAAGAATTCATAAACATTGAAAAATGTAGCTCTACTAAATTACCACCTAAGAATTCGGACTTCCAACCACCATTCAAAAAGAAGAAATCACATATAGGCGAAGAAAGTTTAAAAACACGAATTAGGAAATCGACTGCTAAAGAACTACTCAAATGTGATTTATGTGAATATAAGACAATACGAAAATATGATTTAAAATCACACATTCTTACACATACAGGTGAAAAACCATTTAAATGTGATTTATGTGAATATAAGGCAACACAAAAAAGTCATTTAGTAAGACATAATCGTACACATACAGGTGAAAAATCATTTAAATGTGATTTGTGTGAATATAAGACAATACGAAAATATGATTTAAAATCACACATTCTTACACATACAGGTGAAAAACCATTTAAATGTGATTTATGTGAATATAAGGCAACACATAAAAGTTCATTAGTAAGACATACTCGTATACATACAGGTGAAAAACCATTTAAATGTCAGCTATGTGATTATAAGGCAACAAATAAAAGTGCATTACTAGGTCACATTTTAAGACATACAGGTGAAAAACGATTTAAATGCGAGCTATGTGATTATAAAGCAATAAATAAAAGTACATTACTAAAACACGTTCGTAGACATACAGATGAAAGATCATTCAAATGTGAGCTATGCGAATATAAGGCAAAAGATAAAGATACATTAATATATCACATTCGTGCACACACTGGTGTAAAAACATTTAAATGTAATCTATGTGATTATAAGGCAACAAATAAAAGTGCATTACTAGGTCACATTTTAAGACATACAGGTGAAAAACGATTTAAATGCGAGCTATGTGATTATAAAGCAATAAATAAAAGTACATTACTAAAACACGTTCGTAGACATACAGATGAAAGACCATTCAAATGTGAGCTATGCGAATATAAGGCAAAAGATAAAGATACATTAATATATCACATTCGTACACACACTGGTGTAAAAACATTTAAATGTAATCTATGTGAATATAAGGCACTACGAAAAACTTCATTGAAATTACATGTTAGTACACATACAGGTGAAAAACCTTTTAAATGTGAGCTATGTGATTATAAGGCAACACAAAAAAGTCGTTTATTAAGACATAATCGTACACATACAGGTGAAAAATCATTTAAATGTGATTTGTGTGATTATAAGGCAAAAAAGAAAAGTAATTTGGTAAAACACATTCTTACACATACAGGTGAAAAACCATTTAAATGTAAGCTATGTGATTATACGTCAATTCATAAAAGTGCATTACTAAGACACATTTTAAGACATATAGGTGAAAAACGATTTAAATGTAAGCTATGTGATTATAAAGCAATAGAAAAAAGTGCATTACTAAAACACGTTCGTAGACATACAGGTGAAAGACCATTTAAATGTGAGCTATGTAATTATAAGGCAACACTAAAAAGTAATTTGGTAAGACACATTCGTACACATACAGGTGAAAAACCATTTAAATGTGAGCTATGTGATTATAAGGCAAGAGATAAAAGTACATTGGTAACACACATTCGTACACATACAGGTGAATTACCATTTAAATGTGAGCTATGTGATTATAAGGCAAGAGATAAAAGTACATTGGTAACACACATTCGTACACATACAGGTGAAAAACCATTTAAATGTGAGCTATGTGATTATAAGGCAAAAGAGAAAAGTATTTTGGTAAAACACATTCGTACACATACAGGTGAAAAACCATTTAAATGTGAGCTATGTGATTATAAAGCAATAGAAAAAAGTGCATTACTAAAACACGTTCGTAGACATACAGGTGAAAGACCATTCAAATGTGATCTATGCAATTATAAGGCAAAAGATAAAGATACATTATTAAATCACATTCGCACACACACTGGTGTAAAAACATTTAAATGTAATTTATGTGAATATAAGGCACTACGAAAAAGTTCATTGAAATTACACGTTAGTACACATACAGGTGTAAAACTATTTAAATGTGAGCTATGTGATTATAAGACAAATTATAAGCACCTTCTAGTTAGTCATATTCGTACACATACAGATGAAAAACTATTTAAATGTGAGCTATGTGATTATAAGACAACAGATAGAAGTACATTACTAAAACATGTTCGTAAACATACAAGTGAAAGACCATTTAAATGTGAGCTATGTGATTATAAGACAACAGATAGAAGTACATTACTAAAACATGTTCGTAGACATACAGGTGAAAGACCATTTAAATGTGACCTATGCGAATATAAGGCAAAAGATAAAAGTACATTATTAAATCACATTCGTACACACACAGGTGAAAAACCATTTAAATGTGATTTATGTAAATATAAGGCAGCACGTAAAAGTTCAATAACAATACACTTTCGTACACATAAAAGTGAAAATATATTAAATAAAAACATTGAGAAAAAAACAGGTAAAAAATTAAAAACGACATAA
Protein Sequence
MMYHKGGVLGSDDVESDPIYQKSKGGQQEPEEPYSPLVSDYAPSSECSSSDSEEQIHKPIVASTRSRSLMCNRQLTPTRNIALSTFSTPEPFKNVLTLVRSRVLESNSSELDVDIPSTSSPTIFDSLLDVPFIASTDANNLKLNSNTTVNDFQIESPKQQRRRKRERNELKWQRNVSKKRSYNEVTEGFVLTEDEKFACTSSEVYTNIGKCSSDELPPKKSSFKPPFKKKKTHESEESLETRIRKSTVKQVLKCELCDYKATNNSALVSHIRTHTGEKPFKCELCDYKARDKKALGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSSLVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGKKRSYNEVTEGFVLTEDEKFACTSSEVYTNIGKCSSDELPPKKSSFKPPFKKKKTHESEESLETRIRKSTVKQVLKCELCDYKATNNSALVSHIRTHTGEKPFKCELCDYKARDKKALGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSSLVSHIRTHTGEKPFKCDLCDYKAIDKKSIGKHIRIHTDERPFKCELCDYAAKSTSALVSHIRTHTGEKPFKCELCDYKAIDKKSLGKHIRIHSGEKPFICDLCGFKTKLKIYLVNHIRRHRGEKPFSCDFCEYKATVKYALKLHIRNHTGEKPFKCNICDYKAAVKGTLLQHIRTHTGEKPFKCHLCDYRATNNSAVINHIRTHTDEKPFECDQCDYKAREKSNLIRHIRTHTGEKPFKCELCNYKATDKGTLLKHIRAHTNERPFKCKFCDYETAWKGTLVRHIRIHTGEKPFTCHLCDYRATNNSAVINHIRTHSDEKPFKCELCDYKAAEKGRLLMHIRTHTGEKPFKCHLCDYKAAEKYRLRLHIRTHTVKKRSHNEVTKEFINIEKCSSTKLPPKNSDFQPPFKKKKSHIGEESLKTRIRKSTAKELLKCDLCEYKTIRKYDLKSHILTHTGEKPFKCDLCEYKATQKSHLVRHNRTHTGEKSFKCDLCEYKTIRKYDLKSHILTHTGEKPFKCDLCEYKATHKSSLVRHTRIHTGEKPFKCQLCDYKATNKSALLGHILRHTGEKRFKCELCDYKAINKSTLLKHVRRHTDERSFKCELCEYKAKDKDTLIYHIRAHTGVKTFKCNLCDYKATNKSALLGHILRHTGEKRFKCELCDYKAINKSTLLKHVRRHTDERPFKCELCEYKAKDKDTLIYHIRTHTGVKTFKCNLCEYKALRKTSLKLHVSTHTGEKPFKCELCDYKATQKSRLLRHNRTHTGEKSFKCDLCDYKAKKKSNLVKHILTHTGEKPFKCKLCDYTSIHKSALLRHILRHIGEKRFKCKLCDYKAIEKSALLKHVRRHTGERPFKCELCNYKATLKSNLVRHIRTHTGEKPFKCELCDYKARDKSTLVTHIRTHTGELPFKCELCDYKARDKSTLVTHIRTHTGEKPFKCELCDYKAKEKSILVKHIRTHTGEKPFKCELCDYKAIEKSALLKHVRRHTGERPFKCDLCNYKAKDKDTLLNHIRTHTGVKTFKCNLCEYKALRKSSLKLHVSTHTGVKLFKCELCDYKTNYKHLLVSHIRTHTDEKLFKCELCDYKTTDRSTLLKHVRKHTSERPFKCELCDYKTTDRSTLLKHVRRHTGERPFKCDLCEYKAKDKSTLLNHIRTHTGEKPFKCDLCKYKAARKSSITIHFRTHKSENILNKNIEKKTGKKLKTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-