Ttri007743.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- JARID2
- Assembly
- GCA_905220615.1
- Location
- HG992305.1:20623304-20632350[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7 1.8e+04 -3.6 0.0 27 44 262 279 253 295 0.77 2 2 5.9e-23 1.6e-19 70.3 0.1 7 89 627 706 622 706 0.93
Sequence Information
- Coding Sequence
- ATGAAGCCAAAGACTCCACAAAAAAGGGTGCTGGCCCAGCGTAAATTTGCCCAGGGTGTTTCAATGTTTACATTAGAGAAAAGGAATATATCACCATCAACTTCACTGCAAATCCAATCTGGGGCTGACAAAGTTGAGAAACAGGCCTTATTCTCACTTTCAGCTAATCAGTATTTAGATTGGGTTGCATTTCAAAAAATTCACCCTCATGAGAGTGACATTGAATGTGACGATCAGATAGAAGGGAAGGAGACCAATGATTCACTCATAGATTGTGTTGAAGAGAAGAAAGATTACGATATGGATAAGAAGATCAAAGAAATGACTCAAAAGGCCCCTGTAATAATGTTGAAAAAATTGGATATCTCATTGCTCGCTGAAAAAGCTTCTGATATCCCAGAAAGAATTGTTACTTTAAAGAGACCCATATTGAAAAGGAGAAAATCAGCAGCTGTGATAGTAAGGTCTTCAGATAGTATGAGCTCTTCAAGTGAAGACAGTATTTTCACAAGAAGACGGTGCAGTAGAAAGATGGAGTTATCATGTGATAATTCATCCGAAGACGACACTCCATTGAATAAGCTCTGTGTCGACAGTAGGAAGAATAAGCAAAAAGTGACAAAGGCAGAAGAAGCCAAGAATGGAATAGTTGCAGAGCAAGAAGTGGAAGAAGAAAAGGAGATAGATTTTTCAAAAGTAACCATATCAACGCAGAAAAGCATCATATGTAGAAAGAGCAACCGCAAAAGTCTGTCCAAAATCGATGGTACAACGAATGATGATGATGGCACCTCTGTTAATGCAGTTGAATTAAATGAACATGTACAGAAAAAAGAAGAATCGCACAATGAACACAAAGAATCTGTCAACGCCAAAGAGGTAACAGAAATGCCACAAGACATTTTAGAGAATTCTGCAAACCTTTTTGGTATGTCAGTATTGAAGAAAAACCCAGTGATGGTTCCAGGAAGCAGTGATAAAATGGAAATACTATCTGACTTCACTGTGACACCGCCTCTACTTTTGCAGCTTAGTGATGATGAAGATGATTTGACATTCAAAGTACCAGAACTGATGCCTACCAAGTACAAACGCAAAAATTCCATTGATGCACATACATGCCCCGTTTCCTGCCTATCAAACCACAATACTGGTGAACATGAACCAAATCTCATACCATTAAATTTATGGCAGAAAAAGTGCAAGAATTGCCACATCCTTACGCGTATACGCAACACTGTCACAACAATGGCTGAAAAGGAGACAAACAATGCGGAGGATGTCTATCAATTTAAGTGTGAAAACAACAAATTAACAAACTACAGGCATAGTACGCCACAATATCATACAATGTATCTCGATTGCTTTGAGGACAACTCTCCTTATATAATTCAAATTGTTAGTTGTAAACAGGATAATAAGCCAACACTGAGCGCTAGAATATTGCGTCGCTCCCAACTTGATCCGCAATTGTTGAAGAAAGCCTCCGGTGATATAACGAGTCCGACATTCATAAAGGAGATTGTCAGCAGCTTGGAAGGGCCTATCACAACTAACCCCTCTGCCTCTACGGAGGTGGACAATGAGCAAAACAAACGGAAACAACCAAAACGGTATGACGTATTCCCGCGACCGTCGCAGGAGGCAGTAATGGTGGAGGCGCCTGTTTATAGGCCAACGGGCGCTGAATTTGAGAATCCAATTGTATACATCGAAAGTATTCGTCCGGAAGCCGAAAAGTTTGGCATATGCAAGATAATACCACCAGCTGATTTCAAACCAACATTCAACACTGTACCTGAGGACCTCAACTTTATGTCGAGCAATCAATATATATGCAAGATGTACATGCGATGGGCGTCTGCATCAAGGGAACTGTGCGCCATCAAGACATATTTGGCAACGCAAAATGTTGTCTTCAAACGACCACCATTGATTGATGGAATCGAAGTGAATCTTGCGAAACTCTATCACAAAGTCCAACGTATGGGAGGGTTGAGGGAGGTGATTGAGAAGAAGAAATGGACACGTGTTGCTGAGGAGATGAATTATAGTAAAACATCAAATGTTGAGACAAAATTGGACAGATTTTATTGTAAATATTTGTTGCCTTACGATACTTTAACATCAATGGAGCGCCAGGACATACTGCGTAGAGTTGAGGTGGAATGGAATAAAAGATTCAATAAAATGTTGTTTCGTGCCCGCAATCCTTTGTATCGCCAACAGAGGATACTAATGGAGACATCATCCGATGATGATGATGAAGATGATGATTTCCCCAGTTTGGATGAGTCGGAGGATTGTGTGTTACCAGGACGGCAAATGAATGTGAGGACATTTAAAAATATAGCTCAACGGAGCATGGAAATCCATTTCCCAGCGAACCCGAATCCAACGCCAACGCAGGTGGAGAATGCTTATTGGGAGCACGTGCTCTTTGGACGTGAACACATTTGCGTTAATACGGCATCAATTGACACGGGCGAGAAGTCATTCGGATTTACAAAGAACAAGAGTGACCCCTATTCTAGACACCCGTGGAATTTAAAGGTATTAAGCAATAATCCACTATCAGTACTCCGTTCTATGGGGCCAGTGCTAAGTGCGACCGTTCCTGCCTTACATTTGGGAATGGTCTTTACGACTTCATGCTGGCATAGAGACCCGCATGGATTACCATGGATTGAATATCTACACGAGGGACCACCAAAAATATGGTACGGAATACCACACGACTGGAGTGAGAATTTCCGCAAAGCAGTTGAGACATTGGCCCCAGCTTACTGTCAAAACAAGGCAATATGGCTGCCATCTGACATTGCAATGTTTCCGCCAAAACTGCTAATTGATAATAAGGTGTCGTTATCTAAAACAACCCAACAGGCTGGCGAATATATTGTTGTTTTCCCAAAGGCGTATAGCTCAAGCATTTGTACTGGATACTCGATCTCAGAGAGTGTTTATTTTGCGCCCCAGAGTTGGCTGATGACAATGCAGATTGATTTTCAGGAAGTCCGTGACAGTTGCGAGCCCACAATGTTCTCGCTGGAGCATTTGTTAATATCGATTGCCAATGATCCGCGCAGTTCGCAAGCTGTCAAAATACAAATACACAACACACTCGATATTATAATACGTGACGAAATCGAGAATCGTTACGCACTCGAGAAACTTGGTGTACCAATTAATGTGAATATGCAACCACCTAAGAAGAAATCATTCTTACATTCGTGGAATGTTGGCGAGCACACAGAATGCGATATATGCCGGCGAACATTATTCCTTTCTAAGGTAACTGGCATATCTGGTCTCGATTTGTGCCTGGAGCATGCGGTGAGAATGTTGGAGGTAAAGTCGAGCGAGCAAATCATGCAAATCAAAAAGTGCATAAATGTGATTTGCTTCTACACGGAGGACAACTTGGATGAAATTATGAAAAGTTTAAGAAATAGCATTATGTAG
- Protein Sequence
- MKPKTPQKRVLAQRKFAQGVSMFTLEKRNISPSTSLQIQSGADKVEKQALFSLSANQYLDWVAFQKIHPHESDIECDDQIEGKETNDSLIDCVEEKKDYDMDKKIKEMTQKAPVIMLKKLDISLLAEKASDIPERIVTLKRPILKRRKSAAVIVRSSDSMSSSSEDSIFTRRRCSRKMELSCDNSSEDDTPLNKLCVDSRKNKQKVTKAEEAKNGIVAEQEVEEEKEIDFSKVTISTQKSIICRKSNRKSLSKIDGTTNDDDGTSVNAVELNEHVQKKEESHNEHKESVNAKEVTEMPQDILENSANLFGMSVLKKNPVMVPGSSDKMEILSDFTVTPPLLLQLSDDEDDLTFKVPELMPTKYKRKNSIDAHTCPVSCLSNHNTGEHEPNLIPLNLWQKKCKNCHILTRIRNTVTTMAEKETNNAEDVYQFKCENNKLTNYRHSTPQYHTMYLDCFEDNSPYIIQIVSCKQDNKPTLSARILRRSQLDPQLLKKASGDITSPTFIKEIVSSLEGPITTNPSASTEVDNEQNKRKQPKRYDVFPRPSQEAVMVEAPVYRPTGAEFENPIVYIESIRPEAEKFGICKIIPPADFKPTFNTVPEDLNFMSSNQYICKMYMRWASASRELCAIKTYLATQNVVFKRPPLIDGIEVNLAKLYHKVQRMGGLREVIEKKKWTRVAEEMNYSKTSNVETKLDRFYCKYLLPYDTLTSMERQDILRRVEVEWNKRFNKMLFRARNPLYRQQRILMETSSDDDDEDDDFPSLDESEDCVLPGRQMNVRTFKNIAQRSMEIHFPANPNPTPTQVENAYWEHVLFGREHICVNTASIDTGEKSFGFTKNKSDPYSRHPWNLKVLSNNPLSVLRSMGPVLSATVPALHLGMVFTTSCWHRDPHGLPWIEYLHEGPPKIWYGIPHDWSENFRKAVETLAPAYCQNKAIWLPSDIAMFPPKLLIDNKVSLSKTTQQAGEYIVVFPKAYSSSICTGYSISESVYFAPQSWLMTMQIDFQEVRDSCEPTMFSLEHLLISIANDPRSSQAVKIQIHNTLDIIIRDEIENRYALEKLGVPINVNMQPPKKKSFLHSWNVGEHTECDICRRTLFLSKVTGISGLDLCLEHAVRMLEVKSSEQIMQIKKCINVICFYTEDNLDEIMKSLRNSIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -