Tpel006135.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- grn
- Assembly
- GCA_948150575.1
- Location
- OX411249.1:22198-24499[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-16 1.5e-12 46.9 2.6 1 35 480 513 480 514 0.97 2 2 8.6e-18 1.7e-14 53.1 7.5 1 35 541 574 541 575 0.97
Sequence Information
- Coding Sequence
- ATGGACGCGACCGTCGAGAGCGACGCGGACGCCGGGACCGATCAGCGACGTGCGGAACTTCACGCCGAACATCACCAACAACACGCCGAACATATTCGGCAACATTCGGACCAGCACCACCGACATCCCGAACACCACCGACAGCTGCCTGAGCATCATCAACAACATTCAGAGCATCATCGACAACTCCCTGAACATCATCAACAACTCCCTGAACATCACCAACAACACTCAGAGCATCACCAACAACACTCAGAGCATCACCAACAACATTCCGAGCATCATCAACAACTCCCTGAACATCACCAACAACATTCAGAGCATCAACAACAACACTCCGAACACCAACAACTCTCTGAACATCACCAACACGCAGACCGACACCATTCCGATCATCATCCCGAGCACCGACGACAGCACGAGCCCGAGGAGGCGCTGCGTCTCATAAAGGCCGAGGAGAAGGTCGACGGCGAAGGCATCTCGGTGATCACCTCGCGGCGACAAGTGCGCACGATCACCGCCGCCGGACACATCACCACCGACGAGCTGCCGCCGCATGCCGACGCTCACTCGACCCGAGACGACGTCAAGCGCGAACCGTCCGAGAGCGCCGTCCCGCCCCCGCCCGCCGCGCCTCTGCCCGCCCTCGACGAGACCGCGCGTTATCTCACGTACGCGCCTCGCCAGCCCGCCTTCGACGCGCCGGAGCCGGACGCGGAGCGCTTCTCGCCGCAGTACGAGCTCGAGGCGCTCGCCGGCGGCTACAAACCGGGCACCTACGCGAGTCTGCAGCCCGTCAGCTCGGCCGGTTACGGCTACGCGCCCGGCGGATACGCGTACGCGAGCGGAGGCAAAGAGCTGCTCATGCTGTACCAGGGCGGCGGCTCGGGCGCGCCGGGCGTCGGACAGGAGTCCCCGCCGGGCCCGCTCTACAGAGACCCGCCGCTGTCGTCGATGGCGCCGCGCTCTCACCTCGTCTACGGGCCGATCGTGCCTCAACAGCAGCTCTACGACGTGCCGCCGAGTCCCAACTCGCAGCAGGTCGGTCGCGTCGAGCGGAGTCGTCGTCGCCGCGCCGCGCATCACACGGTCACGTCTCGTATTCTCGCACAGATCACGATATACAGTCAGAACGCGGTGCCGTACAAGGTGACCGGCGGAGAGCAGTACGCGGGTCAATTGGGTGCGGGGTCTCCGAGCGCGGACATGCTCGGCGCGGTCGGGGCCGCGGGCGGCGTGGAGTACGTGGGCGGCTCCGGCGCCGGCGGTTACGTCGTCGAGGCGTACCCGCAGCAGGGTTGGCCGCCGGGACACAGCATACCGATGGAGAACTTCGAAGCGGGTGAGTGGCGGAGGTCGGCGGCTCGCGAGGACGGCGAGCGTCTCTACATGTCGCGTGTCGCAGCCGGCGCCAACATCGGCGTCGAGATGAAGGAGTGCGTGAACTGCGCGGCGGCGTACACCCCGCTGTGGCGTCGGGACGGCACCGGACACTATTTGTGCAACGCGTGCGGCTTATACACGCGGGTGAACGGCGTCAATCGGCCGCCGCTCAAGGGACAGAAGAGCAAACCGCAGCAGGCGATGCCCCAGAACGGCAACAGGCGCGTCGGCGTCTCGTGCGCGAACTGCCGCACTTCGAACACGACCCTGTGGCGGCGCAACAACAACGGCGAGCCGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCCCTGAGCATGAAGAAGGACGGCATCCAGACGAGGAAGCGGAAACCGAAGAGCGTCGGCGGCCACGCGGGCGTCGGCAGACCGAACGCGGGACTAGGTCGGTACGACGCTGTCGAAAGTTCGCCGATACTGATCGCCTTTACTAATCGTCTAATTGCATTTCAGGATATCGTTAGGAGCGCTCTATTCGCCGGCCCTTTCTACTTTAATATATATTTTAACAACAATGCATTTATAAACGTTACCTATTTTATATGTAGTTATGTACGATAG
- Protein Sequence
- MDATVESDADAGTDQRRAELHAEHHQQHAEHIRQHSDQHHRHPEHHRQLPEHHQQHSEHHRQLPEHHQQLPEHHQQHSEHHQQHSEHHQQHSEHHQQLPEHHQQHSEHQQQHSEHQQLSEHHQHADRHHSDHHPEHRRQHEPEEALRLIKAEEKVDGEGISVITSRRQVRTITAAGHITTDELPPHADAHSTRDDVKREPSESAVPPPPAAPLPALDETARYLTYAPRQPAFDAPEPDAERFSPQYELEALAGGYKPGTYASLQPVSSAGYGYAPGGYAYASGGKELLMLYQGGGSGAPGVGQESPPGPLYRDPPLSSMAPRSHLVYGPIVPQQQLYDVPPSPNSQQVGRVERSRRRRAAHHTVTSRILAQITIYSQNAVPYKVTGGEQYAGQLGAGSPSADMLGAVGAAGGVEYVGGSGAGGYVVEAYPQQGWPPGHSIPMENFEAGEWRRSAAREDGERLYMSRVAAGANIGVEMKECVNCAAAYTPLWRRDGTGHYLCNACGLYTRVNGVNRPPLKGQKSKPQQAMPQNGNRRVGVSCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSVGGHAGVGRPNAGLGRYDAVESSPILIAFTNRLIAFQDIVRSALFAGPFYFNIYFNNNAFINVTYFICSYVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -