Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411258.1:6966118-6975597[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.41 23 5.7 0.1 1 23 88 111 88 111 0.93

2 17 0.5 28 5.4 0.4 3 23 116 136 114 136 0.95

3 17 1.3 71 4.2 0.1 2 23 140 162 139 162 0.85

4 17 0.053 2.9 8.5 0.8 1 20 434 453 434 455 0.95

5 17 0.0026 0.14 12.6 0.5 3 23 466 486 465 486 0.98

6 17 7.1 3.9e+02 1.8 1.0 1 23 502 525 502 525 0.93

7 17 8.5 4.7e+02 1.6 4.3 1 22 534 555 534 559 0.82

8 17 0.5 27 5.5 0.4 2 23 637 659 636 659 0.83

9 17 0.0005 0.027 14.9 2.7 1 23 693 716 693 716 0.95

10 17 2e-05 0.0011 19.3 2.8 1 23 723 745 723 745 0.98

11 17 6.1e-05 0.0034 17.8 3.3 1 23 750 772 750 772 0.98

12 17 2.5e-05 0.0014 19.0 1.1 1 23 778 800 778 800 0.99

13 17 3.7e-06 0.0002 21.6 2.0 2 23 807 828 806 828 0.98

14 17 1.3e-05 0.00071 19.9 1.6 2 23 835 856 835 856 0.98

15 17 1.2e-06 6.5e-05 23.2 0.1 2 23 863 885 862 885 0.96

16 17 0.00087 0.048 14.1 0.4 2 23 892 913 891 913 0.97

17 17 0.58 32 5.2 3.7 1 23 919 942 919 942 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.41	23	5.7	0.1	1	23	88	111	88	111	0.93
2	17	0.5	28	5.4	0.4	3	23	116	136	114	136	0.95
3	17	1.3	71	4.2	0.1	2	23	140	162	139	162	0.85
4	17	0.053	2.9	8.5	0.8	1	20	434	453	434	455	0.95
5	17	0.0026	0.14	12.6	0.5	3	23	466	486	465	486	0.98
6	17	7.1	3.9e+02	1.8	1.0	1	23	502	525	502	525	0.93
7	17	8.5	4.7e+02	1.6	4.3	1	22	534	555	534	559	0.82
8	17	0.5	27	5.5	0.4	2	23	637	659	636	659	0.83
9	17	0.0005	0.027	14.9	2.7	1	23	693	716	693	716	0.95
10	17	2e-05	0.0011	19.3	2.8	1	23	723	745	723	745	0.98
11	17	6.1e-05	0.0034	17.8	3.3	1	23	750	772	750	772	0.98
12	17	2.5e-05	0.0014	19.0	1.1	1	23	778	800	778	800	0.99
13	17	3.7e-06	0.0002	21.6	2.0	2	23	807	828	806	828	0.98
14	17	1.3e-05	0.00071	19.9	1.6	2	23	835	856	835	856	0.98
15	17	1.2e-06	6.5e-05	23.2	0.1	2	23	863	885	862	885	0.96
16	17	0.00087	0.048	14.1	0.4	2	23	892	913	891	913	0.97
17	17	0.58	32	5.2	3.7	1	23	919	942	919	942	0.97

Sequence Information

Coding Sequence: ATGAGTTCTGATGATTCTGATGACGAGCCCCTGTCTTCGTTAGCTGCGAAAAAGTCTGAACAGTCGAAGAGCGATTATGAGGCTTCCACGGGAGACGAGGATTCAGATTCCTCTGACACTGAAGAAGAACAACGAAAGAAAGTAATCAGAAACAATCTTTTTCCTAAAATACGGAAGCCCAGAGTATTACCGCCGCCTCCTATAATCGAACGGCCTATGGATGTTTGGCTATACTTTAAAGATCTTACTGTAGCTGGGCCTTACAGTTGCTTACTCTGCCCGGAATGGTTTATTAATAAAACAAAACTCGTAGTGCACTACATTTTAAATCACAAAAAAGATTTTTGTGGGATTTGTCGCTATTTTGTCCCGGACCAAGAACACTGGATATTACATCAACAATTCCATTGCCCATGGGTCTGTTCACAATGTCCAGAAACATTCCTTTCTGATGCAGATTTACGAATGCACTTCAGCTTAACTCACAACCTCGTGCACTGCCGCCTATGCTCTTTCATGCTAAATGATGATGAGGAGTATGATAGGCATTTATTTAAAAAACATAATATTCTCGAAATCGCTCACAAAGACGCATCCTTTCCTTGGGAACTCGAATATGATGGGAGTACGAAATTTGTATGTCTATTCTGCTCTAAAAATATCATAGTCACAGACTTCTTCAGACACTTCATGTGCTACCATAGATATACTTTGAAATGTTTCTCCATGATGCTCTCGGGTAAGGAGGTGCCCTTCACAATTCACGGAGCTAATATTAGTGCAGAGTTCCTTTCTACACATTTTGCCGATCAAACTAGATGCGGTTATGTAGATTTAGAACCGAAACAGGAGGAGAAAACGAGCAACGATGACAATTCAAATTTTATTGAAGCGTTAATACCTGAAATTAAACAGGAAATTGTGAGTAATCCCTCTGAAGACGATAATTCAAAACCTGTTGCTGAGAAGAGTCAACAAGAAGCTGTATCACTCGAAATAATTGAAGATGATGCTGAACAAAAATTAAATGAAATAATGGCTTACGGTGGAGAGGAAATATTTGACATAACATCGGTCGAAGTTATAGTACTACAGGACATGTGCCGTTTGTATATTGATCAAATAATGAGAGAGATCACTGAGGAATCTTTGCAAACGAAAAAGGAGTTGGATTTTTCTTTATTAAGAAATGACACAGAAGAACCGCTAGAATGTCCAATTTGTGAGGAACATCTTCTTAATATTGCACAGTTTTTGTCTCACCTAACTAAATCACATTCGGTTAACTGTGTACCTGTTTATTCTTGTCGTTTGTGCTTGCAACACTTTGATACTGAGTCTGAGTATAGGAAGCATCTTGCGTTGGAAATAAAGGATTTTGATGATCTATGGTTATGTCAGTATTGTGATCGGGAATTTGATAATAGGGAGGACACGAGAGAGCATCTAAAAATACATTTAAGTCAAATGTCCAAAGAGACTTGTTATAGTCCACATGTGGGCTTCAAATGCAGATTTTGCCCATACTTATTCTGGAATGAGACCGAAAGAGAAGACCATACTAGGATGATGCATTCTGATAAGTGGAAGGAAGAGTTTTATAAATGTTGTATGTGCAGTATTTTCTATAGTGATAAGGTGTTCTTCTCCTATCACTTTATAGAAAAGCACATGCGTAATGGTGAAAATTTAATATATTTATTAAAATGTATGATATGCAGTATAACAACGCCAAGTATTGAAATAATGAGGGAACATTTCAAAAGGGTTCATCCAGATTCAAAGAAATTGTTTTGCTGTTTACCACCTTGCAAATACAAACCAATGGCACAGGCGAAGTCATTCAGAGTGCATAAGAAATTGGTGCACACTCGTGGTTTAGGCAGTAAAGGTGCGGGTCCAAGTTTAAATTGCGCTGTTTGTGGTCGAGAATTCAACAATGCTAAAGCATGTGGTACACATATGACTTTGGCGCATGGACCTGGGAGATTTAAATGCAAGCTCTGTGATGATGCTTTGCAGACATGCGATGAACGCAAACTGCACTATCTTCTAAAACATCCTGGCCAGTTTCATTTTGAATGTAAACTATGTAAGAAAACATTTCAATATAAGTCGTCACTTTATATTCACCGCTCTAATGTACATTTGAAAACGCAGCAAACTTATACTTGTACCTATTGTAATAAGGAATTTCGAAAAAGAGATTCGTACCGTGAACATTTACAAATTCACGAAGGCCCTCGTCACACGTGTTCATATTGTCCCATGAGATTTGTCCAACGGTCTAATATGTTACGTCACGAGCGACGTCATACTGGTGAGAGGCCTTATTCTTGCCCGGAATGTCCGAGAACGTTTTCTGATAAAGGCGCTTGTACTGCCCATACTAGGACCCATAACAGAGAAACGCTGAATCAGTGTATGTACTGCGGGCAGACGTTTGTGCAGAAATCCAAGCTTAAATATCATATAAGAAAACATACAGGAGAAGGTTTGGAGACTTGTCAGATATGTTCGAAGATATTTACAAGCACATATTATCTGCGTGAACATATGAAAACACATACAGGCAAGCCAGGCATACCATGCCCTATTTGTCGAAGACCATTCAGTGAAAAAAGTAACTTGATAAGGCATCTGCGTCGGGTGCACAGTTCGATGGGTCAACAGAGCTGTCCCATTTGTAACAAGCAGCTAACTTCGATGGCTGGTCTGAGAAAACATCTATATACACATAGTCGTGTTAAACCGTATAATTGTCTCCATTGCAAAAACAGATACGCTATCAAGAAGTCAGTTATAAAACATCTCCGTAAACGTCACAGTGTCGAAGATGAAAGTGAAAAACATTACCGTCTAACTGACCCAAAAGAATGCAACTTTGGATTAGATGACAACATTTTAACTGCTATTTTTGGCAACACCAAATCTCTTATAAAGCAAACGATAAGAGATAACTTTGTTAATTATCCGGTAGATGTTGTTATCAAGCAAGAGAACGTTGAGGAAGAGAGTCAAGATAGAGCTGAAGAAGGAGAGAGTGAGACGAGCGATACGTGTGCTGAGGACAGCGTTAGCACAAATAAAGTTGGTCTAGATACTACTTTGGAACCGACCAGTTTTGTGTCTGTTAAAATAGAACCTTATGATCCTAATTCTGAGGAAGAAGTCTAA
Protein Sequence: MSSDDSDDEPLSSLAAKKSEQSKSDYEASTGDEDSDSSDTEEEQRKKVIRNNLFPKIRKPRVLPPPPIIERPMDVWLYFKDLTVAGPYSCLLCPEWFINKTKLVVHYILNHKKDFCGICRYFVPDQEHWILHQQFHCPWVCSQCPETFLSDADLRMHFSLTHNLVHCRLCSFMLNDDEEYDRHLFKKHNILEIAHKDASFPWELEYDGSTKFVCLFCSKNIIVTDFFRHFMCYHRYTLKCFSMMLSGKEVPFTIHGANISAEFLSTHFADQTRCGYVDLEPKQEEKTSNDDNSNFIEALIPEIKQEIVSNPSEDDNSKPVAEKSQQEAVSLEIIEDDAEQKLNEIMAYGGEEIFDITSVEVIVLQDMCRLYIDQIMREITEESLQTKKELDFSLLRNDTEEPLECPICEEHLLNIAQFLSHLTKSHSVNCVPVYSCRLCLQHFDTESEYRKHLALEIKDFDDLWLCQYCDREFDNREDTREHLKIHLSQMSKETCYSPHVGFKCRFCPYLFWNETEREDHTRMMHSDKWKEEFYKCCMCSIFYSDKVFFSYHFIEKHMRNGENLIYLLKCMICSITTPSIEIMREHFKRVHPDSKKLFCCLPPCKYKPMAQAKSFRVHKKLVHTRGLGSKGAGPSLNCAVCGREFNNAKACGTHMTLAHGPGRFKCKLCDDALQTCDERKLHYLLKHPGQFHFECKLCKKTFQYKSSLYIHRSNVHLKTQQTYTCTYCNKEFRKRDSYREHLQIHEGPRHTCSYCPMRFVQRSNMLRHERRHTGERPYSCPECPRTFSDKGACTAHTRTHNRETLNQCMYCGQTFVQKSKLKYHIRKHTGEGLETCQICSKIFTSTYYLREHMKTHTGKPGIPCPICRRPFSEKSNLIRHLRRVHSSMGQQSCPICNKQLTSMAGLRKHLYTHSRVKPYNCLHCKNRYAIKKSVIKHLRKRHSVEDESEKHYRLTDPKECNFGLDDNILTAIFGNTKSLIKQTIRDNFVNYPVDVVIKQENVEEESQDRAEEGESETSDTCAEDSVSTNKVGLDTTLEPTSFVSVKIEPYDPNSEEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01453535;
90% Identity: -
80% Identity: -