Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411273.1:2047771-2055449[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.12 6.5 7.4 3.7 1 23 218 241 218 241 0.97

2 11 0.15 8.1 7.1 6.3 2 23 249 270 248 270 0.95

3 11 0.0052 0.29 11.7 6.6 1 23 274 297 274 297 0.96

4 11 0.0014 0.08 13.4 1.8 1 23 301 324 301 324 0.95

5 11 8.2e-06 0.00045 20.5 0.3 1 23 327 350 327 350 0.98

6 11 2.6e-05 0.0015 18.9 1.6 2 23 355 377 354 377 0.96

7 11 0.12 6.5 7.4 0.1 3 22 384 403 383 407 0.92

8 11 0.00029 0.016 15.6 1.4 1 23 415 438 415 438 0.93

9 11 0.49 27 5.5 2.4 1 23 444 467 444 467 0.86

10 11 6.1e-06 0.00034 20.9 0.9 2 23 477 498 476 498 0.97

11 11 7.7e-05 0.0042 17.4 0.5 1 23 504 527 504 527 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.12	6.5	7.4	3.7	1	23	218	241	218	241	0.97
2	11	0.15	8.1	7.1	6.3	2	23	249	270	248	270	0.95
3	11	0.0052	0.29	11.7	6.6	1	23	274	297	274	297	0.96
4	11	0.0014	0.08	13.4	1.8	1	23	301	324	301	324	0.95
5	11	8.2e-06	0.00045	20.5	0.3	1	23	327	350	327	350	0.98
6	11	2.6e-05	0.0015	18.9	1.6	2	23	355	377	354	377	0.96
7	11	0.12	6.5	7.4	0.1	3	22	384	403	383	407	0.92
8	11	0.00029	0.016	15.6	1.4	1	23	415	438	415	438	0.93
9	11	0.49	27	5.5	2.4	1	23	444	467	444	467	0.86
10	11	6.1e-06	0.00034	20.9	0.9	2	23	477	498	476	498	0.97
11	11	7.7e-05	0.0042	17.4	0.5	1	23	504	527	504	527	0.96

Sequence Information

Coding Sequence: ATGTTTCCCGTGTCAGTGAAAAGCGAAAGCAATATTTGTAGTTGTTGTTTAAGTTGTGATCGTAATTTAGAGCCGTTGGGTAATTATTCTAATACATTTATGAATATCATGCAAGAAAAAATATCTGTACTTCAGAATTTAAACCTGTCAACTATGTTTGCTTGCTGGGAATGTATTGGGTTACTCAAAAAGGTTTTGAAATTCCAAATAAAGGTTGAGAATGCACAAGCGATATTGCAATTTTCTGATATACAACCTATGTTCTACCCACCTTTAACGACACTCAACGCTGTAACACTGATAGAAAAAGTGCATCAATACTACAACCATGCAACTTTAGATTTAGGAGTAAAATGTGATATTAAAGTAGATGTTTCCGATGAAATAAAACAAGACATAGAAGAAACAAATTATATGAACGATGATCTAGCACAGTCGTCCAATGATTGTGCCGATGATTTCTTAGAGACGGACGTCAAGAAAAAGTATAAACCGAGCAGCAAGAACCGTAAAGCGACAGCTGCAAATAAATATAAAAGGATAGTATTAAAAAAAGATACGACTAATTATGAACGTGTGTCTGTTACCCCGGAGCAGCTGGCCTCGTTGATGGAGAGGGAGAAAAGTGAGAAGCATTATTTGAAGAACAAATACAAATGCCATTCTTGTATTATTTCCTATAGTACGTCTTCTAAATTGTTGGACCATAATAAGAAGTATCACAGTGTGAATAGCGGTCCGCTGTGTTGTAAAGTATGCAGTAGGAGATATCAGACGACTCGTCATTTGCAATCGCACACGGAATCTCATTATTTGAAGTATGTATGTAAGCTTTGCAATGAAACGTTCTGCCGTAGATATACTTATTACAAACATAATATGAAGTATCATACACAGATTTATGAATGCAAAGAGTGCGGGAAACGTTTCTGGAGACGGACTGACTTCTATGAACATTTTAGAGAAATGCATAGCACGTTTGTTTGTGATTATTGTGGGAGATCTGTTAACGAGAAACAAGCTTTAATTAATCATATGAGGCGCCGCCATCTTTGTACGAAGACGTGCGACGTGTGTAAGAAGACGTTCTCGTCTGTGCGCAATTTGCGTGCGCACAATCGCATGTATCACACGAAATCGGAGGCTTATTGCGTCGAATGTGACTTGACTTTGCCTAATGTTGAACTTTATAAGCGGCATTTGAGGGTTAGCGTCAAACATCGCCCTAAGAAGAAACAGAGTTTCCCCTGTCCGGAGTGTGGCAAAGTGTACGCGCGTCGATGCTCTATGAATTATCATTACACTTATGTCCATAAACAAGAGACTAAATTCAAATGCGATCAGTGTGATAGGTTCTTCTTGAACGGATTCCGTCTACGCACACATAAAAAGGCGACGCACGACAAAATACCACCGGAAAAGACGAAAATGTGCACTATTTGTGGGAGAAGCTTCTCTACAAATCGCATTTTAGAGAATCATATACGCACGCATACTGGCGAGCGGCCGCACTCGTGTCCTCATTGTCCCGCCGCGTTCGCACAGAGGACCGCGATGAGGGTACATATTAGGAATATACATCTAAGGACCCAATCGTGA
Protein Sequence: MFPVSVKSESNICSCCLSCDRNLEPLGNYSNTFMNIMQEKISVLQNLNLSTMFACWECIGLLKKVLKFQIKVENAQAILQFSDIQPMFYPPLTTLNAVTLIEKVHQYYNHATLDLGVKCDIKVDVSDEIKQDIEETNYMNDDLAQSSNDCADDFLETDVKKKYKPSSKNRKATAANKYKRIVLKKDTTNYERVSVTPEQLASLMEREKSEKHYLKNKYKCHSCIISYSTSSKLLDHNKKYHSVNSGPLCCKVCSRRYQTTRHLQSHTESHYLKYVCKLCNETFCRRYTYYKHNMKYHTQIYECKECGKRFWRRTDFYEHFREMHSTFVCDYCGRSVNEKQALINHMRRRHLCTKTCDVCKKTFSSVRNLRAHNRMYHTKSEAYCVECDLTLPNVELYKRHLRVSVKHRPKKKQSFPCPECGKVYARRCSMNYHYTYVHKQETKFKCDQCDRFFLNGFRLRTHKKATHDKIPPEKTKMCTICGRSFSTNRILENHIRTHTGERPHSCPHCPAAFAQRTAMRVHIRNIHLRTQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01453500;
90% Identity: -
80% Identity: -