Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411253.1:8315423-8323977[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.7 2e+02 2.7 0.3 2 23 6 27 5 27 0.95

2 14 0.23 13 6.5 0.6 3 23 945 966 943 966 0.95

3 14 6.3 3.5e+02 2.0 0.4 1 23 1046 1068 1046 1068 0.81

4 14 9.2e-06 0.00051 20.3 5.0 2 23 1071 1092 1070 1092 0.97

5 14 0.012 0.64 10.6 2.8 1 23 1098 1120 1098 1120 0.98

6 14 0.0046 0.26 11.8 2.7 1 23 1126 1149 1126 1149 0.96

7 14 0.72 40 4.9 4.4 5 23 1162 1180 1160 1180 0.97

8 14 0.0022 0.12 12.9 1.3 3 23 1187 1208 1186 1208 0.97

9 14 0.029 1.6 9.3 0.1 2 23 1227 1247 1226 1247 0.96

10 14 8.5e-05 0.0047 17.3 0.4 1 20 1253 1272 1253 1275 0.94

11 14 0.00027 0.015 15.7 0.4 1 23 1283 1305 1283 1305 0.98

12 14 0.012 0.67 10.5 7.3 1 23 1311 1333 1311 1333 0.98

13 14 1.2e-06 6.5e-05 23.2 0.9 1 23 1339 1363 1339 1363 0.98

14 14 0.0015 0.084 13.4 5.1 1 23 1369 1391 1369 1392 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.7	2e+02	2.7	0.3	2	23	6	27	5	27	0.95
2	14	0.23	13	6.5	0.6	3	23	945	966	943	966	0.95
3	14	6.3	3.5e+02	2.0	0.4	1	23	1046	1068	1046	1068	0.81
4	14	9.2e-06	0.00051	20.3	5.0	2	23	1071	1092	1070	1092	0.97
5	14	0.012	0.64	10.6	2.8	1	23	1098	1120	1098	1120	0.98
6	14	0.0046	0.26	11.8	2.7	1	23	1126	1149	1126	1149	0.96
7	14	0.72	40	4.9	4.4	5	23	1162	1180	1160	1180	0.97
8	14	0.0022	0.12	12.9	1.3	3	23	1187	1208	1186	1208	0.97
9	14	0.029	1.6	9.3	0.1	2	23	1227	1247	1226	1247	0.96
10	14	8.5e-05	0.0047	17.3	0.4	1	20	1253	1272	1253	1275	0.94
11	14	0.00027	0.015	15.7	0.4	1	23	1283	1305	1283	1305	0.98
12	14	0.012	0.67	10.5	7.3	1	23	1311	1333	1311	1333	0.98
13	14	1.2e-06	6.5e-05	23.2	0.9	1	23	1339	1363	1339	1363	0.98
14	14	0.0015	0.084	13.4	5.1	1	23	1369	1391	1369	1392	0.95

Sequence Information

Coding Sequence: ATGGATCAATTAATGCAATGTCCGGTGTGCACACTGTACCTGCACGATGGTATGTCATTGGAGTCTCATCTCGACACACATCCCAAAGATCAGGTCATTCGGGCGCTCTGTAGTCTGTCTGTTGCCAAGAGCAATTACTCTAGCAGGAGCTCCACACCCGTGAGTGCAGACTTACTATATAGAGGCCGGTCTCAGACTCCGGCATCTGATGAGAACAAACCAGGTTGGGGCTCGTCAACTGCTAGTATCGACCATGACAGATATTGGCGGAGAACACCTAGTCGGGCATCTAGTACAACTCCTTCGAGAGCTCCAAGCAGAAATGCAAGATCCACACCGAGACTGGTGACACCTACGGGGGTTCGAGTCGGTGAACTTACAGTCGAGAATGTGATCAAGAATTTACCGAGCGGCCCTCCAGTGTTTTCTAACTCTTATTCTGTAAAATCTGGTCATCCGTTATCAACTGCGACACCGTCTGAATGCGAGAGAGGCTTCACCCAAGATCAACAGGATGATGTTGAAACAAAATATTCTAAAAGTGCTGAATACAACTCTACCAAGAACACCATGAGTAGTGTGTTCGCATCGCATCAACTACCACCACCTTATGTCAACTTACCATCATTACCGACAGCATCAAAGAATGACTATGTAAATATAGTTAATAATAGGAGTGATTTTATAATTTCCAAGCCGGATAATCTGGCATTAATGAAGACTGACATGAGTTCTGTACAGTATGTGCCGGGCAGGCAATCTATGCAAGTTATGTTGCCAACATCGCAGACATATATTAGAACTCCTAGGAACAATATTATAATGTCTAGTAACATATGTAGTACATCTCAGAGCGTCTCGAGCGCTGTCTCAACACCGCTGCTGTCTAATCAATTAGATACATTTACACCTACAAAGGCTGTCGTAACTCAACAGACCATATATAGAGAAATGGTACATAGTATAGATGGCAAATCATTTATACCGGGCATACCTACATCACAAAATAACCCATTATTTCCAAATTTAATGGTAGTCAATCCGTATAAGAATTCATCTTGTCTCTGCACCGGTCATCCTTCGACATCTTCTAATTTCAAACACACTTGTATTCATAAAACCAATAATGAGTCAAATAAGACTTTAGTTATTGAGATAGGACCGAATTTACCAGATATGCTGGAGAGTCCTAAACCAGTACCGTTAGTAAATGATGAAGAGAAGGAGCCAATAATGGAAGACATATCTCCTATCCTAGAAGATAACAATGTCACTGATAAAGGTTTAAAAATCTTGAGTAATATAAAACTTGAAGTCCCTGTAGAGCATGACAAGAGTCTGTTGAATAAGATAATTGACCTGACAGGACCTACAGAACATGTCACTACAAACGAGCCAGATTTCAATGACACAGCATCTGTAAAGACTGAGAACTTTAGCAACAATCTCTCAATACCGTCTACATCAAACAACACTTTTGTAGCAAATACTTTTTCTGTTATTAAAAATATAGGTAATCCAGCAAATAAAGAACCTAAATGTCCTGACAAGATATCTGATGTTGAATCGACTGATAGCTGTCATGTGCCCAATCTTATTTGTAATGAGAAACCTTCAATATCACCATGCAGTGAGATATCAGAAAATGGTGACAATGCAGTTGATGCATCACTTTCTGCTAAAAGACAAATGAACATACAAAAAGAAGCAGATGAACTATTCGAAATATTTAAAAATAACAAATCACTCAATGACAAATCAATATGGAGACAAAGCAATATATATGTGAAGAAACAAAAGAAGATTCTTAAGATTAAAAATTCTAAATTCTCTCCATCGAAAGCGAAGGATGTGCATTTACCTTCTTGTTCTGCAATATCAGATGATTTACAGAAAACTAAGTTACAGGAAGTTGAGAAAAAGGATAAACAACTTTCAATCACCGTACGAAGACTGACCCGCGAGGATCCGTGTAGAAGAAACAGCTTCGACACAGATAATGAGGCACAATCAATGGATATAGAACCTGTAGCCCACACATCATTTAGTCAAACAAGTAGCTTTCCCATTATCAATATAGCTCCTGTTAAAGAATTAACCAATAAAAGTGGATTTAGCTGCTCCAATACGAGTCAGATGACACCGCTAGAATCTATTAGACCGATGAATATTATTAACTATGCGAGTATGCCAGAGACCTTCGATGAGGAGTCAAATCACAGAGAGCTGATAGAATTGGACGCGGCTGCAAAGAGTAAACAGTTTGCCAATTTAATGAATGATAACTATTTTGGAGATAACATATATGCAGATTATTTCACACCTGATAAAGTGGAATCTTTTGAGGCTGCAAAAGAGACGGCTAATTACAATAAAGATATGCAGAAAGGAGATACGAGAGGCAATAGTGAATATGTATGGGGTGAACAGCCACAAAAGGAGTATGTGTTACCAAATTTTAATTATAATGAGAGTGCATTGGATGATGTGGAGTTTGGTGGTGGAGAGGGAGACGTTGATGGCGAAGTTGAGGTGTGCGAGCAGGACAGCAAGCTGGATGTGCTCAGTGAGAGTAGAAGTGATTGTGATGTGCCATTAGATATATGCGCTAATGAAAATATGCCTCCACGTGGTGAACTTAGTGGACAGGAGAGCAATGGCGATATGGACGCGCCTTGGACTAGGATGTATCCAGAAGTGCCGCCGCCAGAGCCATACGATCTTATGGCACGCGAGTCTTGGATATCGGACAGTTCTGATGTAGACACCAACGAGAGAAATGATCCGATGAGCATAGATTTGCCAATGGTGAAGCCAGTTTTACCTTACGGTTGTATGCATTGCGAGATGCGTCTATCGACATTAAATGATTTACATGCGCACATTGCAATCGCACATAGTACAATGACAAAGGCACCTTCTGTCATTCGATCGAGGGTAACAGACAAGTTCCGCAAACAAAAAGCTATTAAGGAAGAAAAATGTGATATTAAAATGATACCTGATCCTACACCAGTATCAAAACTAACAGTAGCCTCAAGAGTGCTATTCGACGATTTAAAGGACCTCAAACCTAATTTAGAAGCAATTGGAGATATAATAAAGAAGGAACCAAGGAAACGTCCCCAACGTGATTATGTTTGTCCCACGTGTAAAGTAGATATGTTAACATATACAAACTTCAAAGAACATTTACAAATACACCCATTAGAGTGTTTAACATGTGGCAAGTGCTTCTACAATAGACACAATCTTAATTTACATATGCGAATGCATTTGGGTATTAAGAATTTTCATTGTGATGTCTGCGAGAAACGGTTCTTAACGCGTCAGAAACTTCAGGAGCATCAGAATGTACATACGGGACGAGCGCCTTATAGATGCCCCTTCTGCAATGATACATTCAGACGGTACTCTAATATGTTGCAACATAGAGATCGCTACCACCTTAATAAGAAGCCAAAGATTCGTGATTTTGTATGTCATTGTGGCGAAGTATTCCATTCCAGAGCTAAATTACATTGGCATAAGGAAACACACGAGGAGAAGCCGAAAGCGTGTCCATATTGCAGTGATAAATTTATACATACAGCATCCCTAACAAGGCATATTAGACGGTCGCATAATGCATGTTATATACCGCAAGGAAAGAAGTTTCAGTATAGCATGCAAAATGTGCCCTGTCCTATATGCAAACAGGTATACTTACGGGGTACACTAAAAGCCCATCTATCAACACACACAGATAAACGTCCCTTCGTCTGTGTCATATGCAATAAGGCGTTCACAACAAAATGGAATCTAAAACTGCACAAATGGATACACATGAACCGATCAGCGAAACCATTTAAATGCACCTTATGCAAGGGAGCTTTCATAAGGCAATCTGAATACATATCACATATGAACGCGCACAAATCTGTACGTCCATACACGTGCAACTATTGCGGCTGTCAATTTATTAGGAAATACAACTGCCAGAGACACGTGAAGGAGCACGAAATGGCTAAAAAGTATGTTTGCAAAGTTCCGGATTGCGGTAAGGCGTTCCATAGAAGTTATTATTTGACTGAGCATATGCGGGTTCATAGTGGTGCTCGCCCGTTCTCTTGTAATGTTTGCGGGAAAACTAGTAGTAATAAATCTAATCATAATAAACATGTTAAAGTACATCATTCTAGAGATCCTATAGCTACTGAGGCGTGA
Protein Sequence: MDQLMQCPVCTLYLHDGMSLESHLDTHPKDQVIRALCSLSVAKSNYSSRSSTPVSADLLYRGRSQTPASDENKPGWGSSTASIDHDRYWRRTPSRASSTTPSRAPSRNARSTPRLVTPTGVRVGELTVENVIKNLPSGPPVFSNSYSVKSGHPLSTATPSECERGFTQDQQDDVETKYSKSAEYNSTKNTMSSVFASHQLPPPYVNLPSLPTASKNDYVNIVNNRSDFIISKPDNLALMKTDMSSVQYVPGRQSMQVMLPTSQTYIRTPRNNIIMSSNICSTSQSVSSAVSTPLLSNQLDTFTPTKAVVTQQTIYREMVHSIDGKSFIPGIPTSQNNPLFPNLMVVNPYKNSSCLCTGHPSTSSNFKHTCIHKTNNESNKTLVIEIGPNLPDMLESPKPVPLVNDEEKEPIMEDISPILEDNNVTDKGLKILSNIKLEVPVEHDKSLLNKIIDLTGPTEHVTTNEPDFNDTASVKTENFSNNLSIPSTSNNTFVANTFSVIKNIGNPANKEPKCPDKISDVESTDSCHVPNLICNEKPSISPCSEISENGDNAVDASLSAKRQMNIQKEADELFEIFKNNKSLNDKSIWRQSNIYVKKQKKILKIKNSKFSPSKAKDVHLPSCSAISDDLQKTKLQEVEKKDKQLSITVRRLTREDPCRRNSFDTDNEAQSMDIEPVAHTSFSQTSSFPIINIAPVKELTNKSGFSCSNTSQMTPLESIRPMNIINYASMPETFDEESNHRELIELDAAAKSKQFANLMNDNYFGDNIYADYFTPDKVESFEAAKETANYNKDMQKGDTRGNSEYVWGEQPQKEYVLPNFNYNESALDDVEFGGGEGDVDGEVEVCEQDSKLDVLSESRSDCDVPLDICANENMPPRGELSGQESNGDMDAPWTRMYPEVPPPEPYDLMARESWISDSSDVDTNERNDPMSIDLPMVKPVLPYGCMHCEMRLSTLNDLHAHIAIAHSTMTKAPSVIRSRVTDKFRKQKAIKEEKCDIKMIPDPTPVSKLTVASRVLFDDLKDLKPNLEAIGDIIKKEPRKRPQRDYVCPTCKVDMLTYTNFKEHLQIHPLECLTCGKCFYNRHNLNLHMRMHLGIKNFHCDVCEKRFLTRQKLQEHQNVHTGRAPYRCPFCNDTFRRYSNMLQHRDRYHLNKKPKIRDFVCHCGEVFHSRAKLHWHKETHEEKPKACPYCSDKFIHTASLTRHIRRSHNACYIPQGKKFQYSMQNVPCPICKQVYLRGTLKAHLSTHTDKRPFVCVICNKAFTTKWNLKLHKWIHMNRSAKPFKCTLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVKEHEMAKKYVCKVPDCGKAFHRSYYLTEHMRVHSGARPFSCNVCGKTSSNKSNHNKHVKVHHSRDPIATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01453518;
90% Identity: -
80% Identity: -