Tpel012387.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- ZNF212
- Assembly
- GCA_948150575.1
- Location
- OX411260.1:3291150-3299580[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2 1.1e+02 3.5 1.4 2 21 5 25 4 26 0.86 2 12 0.15 8.4 7.1 0.0 2 20 32 50 31 51 0.94 3 12 0.98 54 4.5 0.8 1 12 271 282 271 291 0.82 4 12 0.011 0.6 10.7 5.0 1 23 507 529 507 529 0.97 5 12 0.86 48 4.7 0.4 1 9 552 560 552 573 0.81 6 12 1.2e-05 0.00066 20.0 0.5 1 23 579 601 579 601 0.98 7 12 0.01 0.57 10.7 2.0 1 23 617 639 617 639 0.97 8 12 3.9e-06 0.00021 21.5 3.6 1 23 645 667 645 667 0.99 9 12 0.00066 0.037 14.5 4.9 1 23 673 695 673 695 0.98 10 12 3.6e-05 0.002 18.5 0.3 1 23 701 723 701 723 0.98 11 12 0.00058 0.032 14.7 0.3 1 23 727 749 727 749 0.96 12 12 9.2e-05 0.0051 17.2 0.1 1 23 757 780 757 780 0.97
Sequence Information
- Coding Sequence
- ATGGAGGTGCTGAAATGTCCCTTTTGTTGTGATGGATTTTTCAATTCCAGGCAATCCCTAATCAAACATTTATCCAGATATGCTAAAAACGTTCCTTGCCCTATATGTGATACTAAATACTTTGATATAAATACACTGATCGATCACATAGGTGATTGTAAAGCTTCTAACAAGCTTATTGAAATAAATGTGAATCCCTGTTTTGATGCTGATGATAATCCTGAAACAATCATAAGTACTTCAGAATGTGATGGAGTATCCCAAGCGCAGGATACAGAAGAGGAAGATACTCATATATCAGCAACGTTCCCCGCAAAGTTTGTAAGAGATAGTGTTCTGGTAAATCATAATTATGCTCGGATGGAACTAATTAGTAAAAGTGATGAGAGTTTTGTAATAAGAAATCAAGATGGGAAGAGGCATAATATCAATGAGTATAGTGGATGTAATGAAGATATTGAGTGCACAACAATAATTGAAGAGAATGACAATAAAAGTGTGGCACAAATGAAGGAAGGTCCAACGGATCAGATCTTACAAACACAAGAATACTTGACAGAATTCATGGATGCAAATAAAACACGTGAAGAGCAACAACTAGAACTTTTTAATGCTAATGGTGAAAGTGAATTTGTGTTTGTACAAACTGATCATCATCCAACATCAATGTTAGGTGATCCGGATGCAAATGAGATTGAAATTGATGAAACAATGCTAGACGTTCATGAAAATGGACAAAACCAAGAGCAGAATAATATAGATGTGGTAGAGCAATGTAATTCTCCATTACAGCAGGAAGATTCAACTGTTTTCAGTTGTACTACATGTAATGTGTCTTTTACTTCTGTCTTGGAACATATAAAAACTTATCATAATGATCAAGATGTCGTTGTTGAGATGAATGCAACGTCGTCAGTAGATCAGGTAATAAAGAAGTCTCCCAATTCTCCTCAAGCATCGGAGGAAACTGAATTTATTAATCCAGAAAGACGGCTATCAGGTCCGCAGGAAACAGAAAAACGTGTAATAACAGAAACTGGGCAAATAGAAACTTTTGTTCTGCCTATTGAATATAAAAAAGAGAGTACTTCAAATACAAAACAACAGAAAAGAACAACTGTAGAGAAAGTTTTAGACAGTAAAGGCAGGCTGTATACTAGGAAAATAGTACAAATTGGAAAATTCTGGAAGGATAAACCACTGCCAAAGAAGAAAGAAACCAAGAAAACAATTATAACCGAATCTACAGAGGGGAATAATAAAGTCCATCATACTGTATTAAAAATGGTAGATGGTCCGGATGGTAAAGTGAAAGCATATCATTGTGTGGCCTGTGGTGTTTCTGTTAAGACCATTGAAGAATTTAAAAAGAAACCATGTGAATCTTCTTCTCCTGTAAACCCTGATTCTGGAGTGAATGATACACAAAAGAAAGTGACTAAAGTTGTATCTAAAAAATCAGTAAAGAGCGCTAAAGAAAAAGTCGTAGCAGAAAAGGCAAAAATCGAGAAAGAAGACTTTTTCTGCAATGTATGCTGCACTACTTTCAAAAGTAATAAATCATTAAGATTACATGTTAGGATGCATGATCCTGTCAAGTCGCGTCCAATAATTCCACCACGTAAAATGGACGTCGAGGACAAGTTCAACTATTACAATTGTAAAGACTGTGATAAATCGATACCTCTCAGTTATAAAAGCGCCCATGAAATGTACCATAAGACGACAACACAATACCACTGTGATATTTGTAATAGAATATTTATATCCGAAGAAAATTTACTTATGCATATGAATGTACATACTACAGATAAGATATCAAAACCCAAAGTGAATAAATCATTACCTTATACATGTATTTATTGTAATAAACAATTTGCGAGGCCGCATGAAAAAGTTAAACATGAAAGAATACACACGGgagagaagccttacaaatgtgaagtatgcggcaagacgttccgtattacttactgtttgactcttcatatgcgcacgcacagcggcgatcgtccctatgagtgtaaactttgcggaaaaagATTCAAGGCACACAGCGTTTATAACCATCATCTAATGACACATTCCGAGGTCCGCGCCTACAAATGTCCATTTTGTCCGAAGGCATTCAAAACTGCTGTGCTATTAAGTGGCCATAAAAATTCGCATACGAAACCGTTCGCCTGTACAGTTTGTAATAGACGGTTCGCATCTCTGTACGCTGTCAGGATGCATATGGAATATCATCAAAAACGGAACAGGTTGCAATATTCTTGTACAATATGTGGTGCTATATATGCTAGGAAATTCGCGCTTAGGGATCATATTAAACAGGATCATTCGGAACAGTCTAATGAATCAGATTTTGAATCATTTATTCTAAAGCAATTTACATTGTCAAAGATAGATGACGAAGCTGAAATTGCCACACAGGCTATTATCGAAGAATCTGATACAACAATTTAG
- Protein Sequence
- MEVLKCPFCCDGFFNSRQSLIKHLSRYAKNVPCPICDTKYFDINTLIDHIGDCKASNKLIEINVNPCFDADDNPETIISTSECDGVSQAQDTEEEDTHISATFPAKFVRDSVLVNHNYARMELISKSDESFVIRNQDGKRHNINEYSGCNEDIECTTIIEENDNKSVAQMKEGPTDQILQTQEYLTEFMDANKTREEQQLELFNANGESEFVFVQTDHHPTSMLGDPDANEIEIDETMLDVHENGQNQEQNNIDVVEQCNSPLQQEDSTVFSCTTCNVSFTSVLEHIKTYHNDQDVVVEMNATSSVDQVIKKSPNSPQASEETEFINPERRLSGPQETEKRVITETGQIETFVLPIEYKKESTSNTKQQKRTTVEKVLDSKGRLYTRKIVQIGKFWKDKPLPKKKETKKTIITESTEGNNKVHHTVLKMVDGPDGKVKAYHCVACGVSVKTIEEFKKKPCESSSPVNPDSGVNDTQKKVTKVVSKKSVKSAKEKVVAEKAKIEKEDFFCNVCCTTFKSNKSLRLHVRMHDPVKSRPIIPPRKMDVEDKFNYYNCKDCDKSIPLSYKSAHEMYHKTTTQYHCDICNRIFISEENLLMHMNVHTTDKISKPKVNKSLPYTCIYCNKQFARPHEKVKHERIHTGEKPYKCEVCGKTFRITYCLTLHMRTHSGDRPYECKLCGKRFKAHSVYNHHLMTHSEVRAYKCPFCPKAFKTAVLLSGHKNSHTKPFACTVCNRRFASLYAVRMHMEYHQKRNRLQYSCTICGAIYARKFALRDHIKQDHSEQSNESDFESFILKQFTLSKIDDEAEIATQAIIEESDTTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -