Tpel015095.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- ZFX
- Assembly
- GCA_948150575.1
- Location
- OX411273.1:2024044-2047190[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.00047 0.026 15.0 3.5 1 23 166 188 166 188 0.97 2 21 2.4 1.4e+02 3.3 3.6 1 23 192 215 192 215 0.85 3 21 0.00014 0.0079 16.6 1.5 1 23 219 242 219 242 0.95 4 21 0.11 5.8 7.6 4.1 1 23 245 268 245 268 0.96 5 21 0.14 7.8 7.2 2.1 1 22 272 293 272 295 0.89 6 21 0.01 0.58 10.7 0.4 3 22 305 324 304 328 0.92 7 21 0.00015 0.0085 16.5 0.8 3 23 341 362 339 362 0.95 8 21 4.2 2.3e+02 2.5 1.2 1 23 368 391 368 391 0.79 9 21 2.5e-05 0.0014 19.0 1.9 2 23 401 422 400 422 0.97 10 21 0.0011 0.059 13.9 0.4 1 21 428 448 428 449 0.93 11 21 0.0011 0.06 13.8 0.1 1 23 717 740 717 740 0.97 12 21 0.023 1.3 9.7 0.7 1 23 747 769 747 769 0.97 13 21 0.049 2.7 8.6 4.6 3 23 775 796 771 796 0.91 14 21 0.94 52 4.6 0.4 1 21 800 820 800 823 0.73 15 21 4.1e-05 0.0023 18.3 4.1 1 23 826 849 826 849 0.97 16 21 0.00069 0.038 14.4 0.3 3 23 854 875 852 875 0.95 17 21 0.023 1.3 9.6 1.0 3 21 885 903 884 908 0.92 18 21 0.0035 0.19 12.2 0.4 1 23 916 939 916 939 0.92 19 21 0.00018 0.01 16.3 0.8 1 23 945 968 945 968 0.95 20 21 0.00018 0.01 16.3 0.1 3 23 979 999 978 999 0.98 21 21 0.0022 0.12 12.9 0.3 1 23 1005 1028 1005 1028 0.95
Sequence Information
- Coding Sequence
- ATGCTTTGGCCAATTACTAATTATTTAGATTTGTGTAAAAAACTATTTTCAAATATAGAATTGAAAGAACATGAAATAAAAACGCAATCGACTCTAATAAACAAATTAAATATAGAATACCAAATAATTGTTTATGACGAAGATCAAATTCTAACCAAAGACATAAAAGAGGAGGAGGGGAGCGATTTAAAAATAGAATTAGACGATTATGACAACCACGAATCGCCAATGGACTTAATGGAAGATGTCAAAGTGGATAATTTAAATGAAACAAAAACGAAACGGAAGAATAACCCATATGCAAAAATTAACTTTGAGAATCACTCTAAAACTGTCAAAATTGATGATAATGAACGCGAAATGATATTAAAACGTGAGAGGGGGTCTTCTTTGTATATAAATAATGAATGTTGCTGTGATAAATGTGTATTAAGGTTTTTAGATTATAAATCTTTGAATAAGCATAATAAAAAACATAATTTTAAGGCTGGTAAATTCATGTGCAGTATATGCGAATGTAGATATAAAACGAACATATTGTTAAAAAAACACATGAAAGAACATTACACGGCGTATCAATGTACTGTATGCAATGAAAAGTTTCACGCGATCAAGTTTTTCTTTGACCATTATAAAGAGAGTCATTTGAACGGTTTCCAGTGCTCAGAGTGCGGTTTGAGGTTCAGTTCATTATCGGAAGTACACAAACACCGTAAGGATGCTCATGCTACATTCACGTGCGATTGTTGTAACAAGAAATATTTTAGTAAAGTTTTATTATCAAAACATATTATAAGGCAACACGAAACAAAGTATGATTGTAGAGAATGTAACATTACTTTTAAATCGGAGAAGGTCTATCGTACCCATTATGACTTCAAACATAAGTTGGCTGCGTCCGATGAGGCTTATTGCGTCGAATGCGATATTAAATTCAGTACATTGTTATTGTACAAACGTCATATACAGACCAGCGTTAAACATGTACCGAGGAAGAGTGCCGAGATAACTTCAGTGAATTGTCCCGTTTGTGGTAAAAAATACACGAGAAAGACTTTTATGATGAATCATTATAGATTGGAACATTTGAAAAGGACTAAGCATTATTGTGCCGAATGCGacaagTATTTTCTGAATGCAACACGGATTAAGGAACATCGTTTGTATGTACACGAGGGGCGTAGAAGGGTTCTCAATAAAGTGTGCTACATTTGTGGGAGAGCGTTTGCTAATAGCAGAGCCTTACAGCATCACATTCATACTCATACGGGAGAGAGGCCTCACGCTTGTCCTCACTGTCCGGCGAAGTTTATACAAAAATATGCTATGCAAAAACATGTAAAGGTATTTTTCCTTGACCAGCCTGACTGTACTGTGGCGCCTAGTCCTTCATCTACAACATCGACTGATGCCACTAACGCAAGAGCCCATAAATCAGACGTTTCCGCATTTGAACAGGTTAGTATATTTTTCCCTGACCAGTCAGACCGTCCTGTGGCGCCTTTAAGTACATTGATAGATGTCACCAACACAAGAGCCCATAAATCAGATGATACCATAATGGAGGAGGAGGAACTTGAAAATATGGCCGATTTAAGTTATAATATCAAAGAAGAATTTTGGAGAGACAATTTTTGCGGAATCTGTTTGAGTTTCGGTAGAAAATTAACACGAATGGGTGGATTTACATCAATATATAAAAAACTATTAGATTCGCACGAACATGCCAATTATAAAGAGTTACTAATATGTTGGGAATGTACAGCAGTACTCGATAAGATAGTTTCATTTCAAAATAAAATCAATAAAACTAATCTTTTATTGATGAAACCTGTTCAAGGATCAATGGTACAACCATCTCTTTCAACATTAAACAAAACAATAATTTTAGAGGAATCATATAAATTAATCTCTTATGAAGATTCTGAAGGAAAAACCGATACAAAAGACGAATTGAAAAACGTCAAAAAACCCAAAAACATTTGGGCGCAAAAAAGGGCTCTTTTAAACAGAAGAGCTAAGTTCAAGAAGGTCCCGTTGCTAATGGACGAAATACCTGAGTTATATTTTAAATTAAGGATTTGTTTGGACGAAGTGCGAGACTGGTTGGTTAGGGAGAAGGGAAATGAGTTTTATAAGAATACAATTTTCAAATGCGATAACTGTGTCGAGGGCTTCGAGAATGAAGATAATTATTTGAAACATATTGAAATGTGGCATGATCAGAATAAAGCAGATTACAAATGTAACATGTGCAATGTGACACTATCTACGATGGAGCAACTGGATTTACATAAAAAAGACCACGGATACAAGTGTTTATGTAAAATTTGCGGTTATGTATGTTACAAAGAGGATCATGTACGGGCACATATATCCCGTATGCATTCACATATGTACCAATGTTCTCTATGTGGTATCAAGTTTTGGAATATTAAGGACCAATCGGAGCATTATAAAGAAATGCATGAAACTTTTATTTGTGATTATTGTGGCGTTACATTTAAAATGAAATATTGTCTCAGAAATCATATACGAAAGAAACATCAACCGGTTATATGTGAAATATGCAACAAAGTCTTTGTCAAATATAACAGTCTATGGTTACATAGAAAGCTGAAACATTCGAATGGTACGCAAGAGAGAGCGTATTGTGTCGAGTGTGACAAGCATTTCGATAATATTTACACGTATAAATGGCATCTGAACAATTCCGTTAAACATAAACAAAAGATAAAACGGAGCTATCCATGTGGTGGATGCAGCAAAATATTTACAAAAAACACTTACATGAAGGAACATTATGATTTGGTACATTTGAAGAAAAATAAATTTCAATGCATACTTTGTGATAAGAATTTCATAAGAAACGCAGACCTAATGAAACATAAACGTAGAGTCCATGACGGTGTAATGTCACCTAGGAATAAAATATGTTACATTTGCGGTCGAGGATTTACTAGAAACGTAATACTCGAGAATCATATAAGAACACATACTGGCGAAAGACCGTTCAACTGTGAATATTGTGCGGCTAAGTTTGCCCAGAAAGTGTCACTCAATACACATGTTAAACTTGTGCATAGAAATAGAACTGTGCCCTGA
- Protein Sequence
- MLWPITNYLDLCKKLFSNIELKEHEIKTQSTLINKLNIEYQIIVYDEDQILTKDIKEEEGSDLKIELDDYDNHESPMDLMEDVKVDNLNETKTKRKNNPYAKINFENHSKTVKIDDNEREMILKRERGSSLYINNECCCDKCVLRFLDYKSLNKHNKKHNFKAGKFMCSICECRYKTNILLKKHMKEHYTAYQCTVCNEKFHAIKFFFDHYKESHLNGFQCSECGLRFSSLSEVHKHRKDAHATFTCDCCNKKYFSKVLLSKHIIRQHETKYDCRECNITFKSEKVYRTHYDFKHKLAASDEAYCVECDIKFSTLLLYKRHIQTSVKHVPRKSAEITSVNCPVCGKKYTRKTFMMNHYRLEHLKRTKHYCAECDKYFLNATRIKEHRLYVHEGRRRVLNKVCYICGRAFANSRALQHHIHTHTGERPHACPHCPAKFIQKYAMQKHVKVFFLDQPDCTVAPSPSSTTSTDATNARAHKSDVSAFEQVSIFFPDQSDRPVAPLSTLIDVTNTRAHKSDDTIMEEEELENMADLSYNIKEEFWRDNFCGICLSFGRKLTRMGGFTSIYKKLLDSHEHANYKELLICWECTAVLDKIVSFQNKINKTNLLLMKPVQGSMVQPSLSTLNKTIILEESYKLISYEDSEGKTDTKDELKNVKKPKNIWAQKRALLNRRAKFKKVPLLMDEIPELYFKLRICLDEVRDWLVREKGNEFYKNTIFKCDNCVEGFENEDNYLKHIEMWHDQNKADYKCNMCNVTLSTMEQLDLHKKDHGYKCLCKICGYVCYKEDHVRAHISRMHSHMYQCSLCGIKFWNIKDQSEHYKEMHETFICDYCGVTFKMKYCLRNHIRKKHQPVICEICNKVFVKYNSLWLHRKLKHSNGTQERAYCVECDKHFDNIYTYKWHLNNSVKHKQKIKRSYPCGGCSKIFTKNTYMKEHYDLVHLKKNKFQCILCDKNFIRNADLMKHKRRVHDGVMSPRNKICYICGRGFTRNVILENHIRTHTGERPFNCEYCAAKFAQKVSLNTHVKLVHRNRTVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -