Tpel016104.2
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- -
- Assembly
- GCA_948150575.1
- Location
- OX411248.1:7138051-7146427[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.022 1.2 9.7 1.4 3 23 694 715 693 715 0.92 2 23 2.1 1.2e+02 3.5 1.4 4 21 1060 1077 1058 1078 0.87 3 23 0.073 4.1 8.1 0.8 1 22 1086 1107 1086 1107 0.95 4 23 2.9 1.6e+02 3.0 3.4 1 23 1150 1173 1150 1173 0.91 5 23 0.039 2.2 8.9 2.2 2 22 1183 1203 1182 1203 0.94 6 23 7.8e-05 0.0043 17.4 0.2 3 23 1255 1276 1253 1276 0.97 7 23 0.51 28 5.4 4.2 1 23 1282 1305 1282 1305 0.93 8 23 0.14 7.6 7.2 0.0 1 22 1331 1352 1331 1354 0.90 9 23 0.019 1 9.9 3.4 1 23 1359 1381 1359 1381 0.97 10 23 0.016 0.91 10.1 0.3 1 23 1387 1410 1387 1410 0.97 11 23 0.00037 0.02 15.3 0.8 1 23 1420 1442 1420 1442 0.98 12 23 0.00024 0.013 15.9 1.2 1 23 1491 1514 1491 1514 0.96 13 23 0.00053 0.029 14.8 1.8 1 23 1572 1595 1572 1595 0.96 14 23 0.002 0.11 13.0 1.5 2 23 1619 1641 1618 1641 0.95 15 23 0.087 4.8 7.8 0.1 2 23 1647 1669 1646 1669 0.93 16 23 0.013 0.7 10.5 0.2 1 21 1714 1734 1714 1735 0.95 17 23 0.0012 0.068 13.7 0.6 1 23 1744 1766 1744 1766 0.93 18 23 8.7e-05 0.0048 17.3 0.6 2 23 1850 1872 1849 1872 0.93 19 23 3.2e-07 1.8e-05 24.9 1.2 3 23 1879 1899 1878 1899 0.98 20 23 0.14 7.6 7.2 3.1 1 23 1923 1945 1923 1946 0.94 21 23 0.26 15 6.3 0.0 1 23 1965 1987 1965 1987 0.97 22 23 0.022 1.2 9.7 1.1 1 23 1993 2016 1993 2016 0.95 23 23 8.8e-06 0.00048 20.4 2.4 1 23 2024 2047 2024 2047 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTTTGAATGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTATCGCCGATTTTTCCTACCACCAGTGCGGATGAGTCGGGACCTGCCGTCCTGGCAACGAAAATCAAAGATTGTGTGTCAGTAAACATAAATGAAAATGATGAACTTCCAACAAATGTGTGCAAGAAATGTCTGGACAATGTCAATAACTGGCATACATTCAAGGAGATATGTGAAAAGGCACAAAATAAATTACTATCATTGAAAAATGATGTCAGCCTACTTGAAGAGGTGAAAGTGAAGGATGAATTATGTGAAGAAGGTTATGATGATGCTGTGGTCATTGATGGTTCTTATCCTGAGTTTGAACAGAATGTTACAGACTCAAATAAATTGCAGCCTGAAGGGCCGCCAATCTTGGCTTCACTGGGACTCACGCCGAGGAGTGATAAGAATTATGTGGATCCGCGTTTGGATTGGCAACGCGTGCATGCTATATTGGACATGGTTCAAGAGGATGAGGTCATTGACTCCTTGCAAAATACTGAGGAGTGTGATGCTATACAACATTCTGATCATGATTCTGATACAGAAGCTGAAGTGTTGTCCGATATAGATCGTGATTATGTAGAATGCAAGGATGGTTACTTATCTAGAGATAAAAGGAAATTTTCAAAATCAAAGCATTCCGACTCAACATTAACTAATAAACCCAAGATCAATGTTATGAAAAGAAAAATGAACATGAAGTATTGCTCGACCCCCAAAGACGCCTGGCAGTTGTTCTTTTCAGAAGATCTGCTGGAATTAATAGTAGACGCGACTAATGAAAATATACGCAGTAATTCGAATCAGTGTTCAACAAGTGTGAAGGAATTAAAAGCACTTATCGGTATACTTTATTACCATGGTATTGTAAGATCTGTACATCATCATCGAAATGAACTCTGGGATGATAGGGTCGGACCGGCTGCGATCAAAAACGCTATGGGCCATGATCGCTTTGAATTTCTACTAAAAAATCTGCGCTTTGAAAAGAGACAATTTGATAATCTTCTAGACTATGATATTATGAAACAAATGCGTAAAGTTTTCGAAATATTTGCACATAACTGCAGAACTGCATTTGATATTGAAAATGTGGTCGTTATTGATGAAATTATTGTGCCTGTATACGGACCTTGTCCATTCAAATATAATATACAGAGGAAAAATCTATGTTCTGGCTTCAAAATGGTGGCATTAGTCGATCCTTCTAACTTTTATGTCAGTAATCTTGATATAGTCACCGATAGCTATCATTTGCCAGAAGAAATTGTTAAAAAATTAGTGCATCATTTGACAGGATCTGGTCGCACTGTGGTTATGGATAGCTGGTACACTTCACTCGCTGTGACACAAAAACTTTTAGATGACTACCGTTTGTACACTATAGGGGCTTTGAATCCTAGAGATGATTTGTTACCTCCTCTGTTCTTGTCTCGACATAGACCTAAGGGAACACACATGACGGCTTTTGTCACAAACACCACGACACTGGCTTCATTTGTTAACAACCGAGGAAAAGTGGTCAATGTACTGACGAATCATCCAAGATATTACAAACGCGCTCATTCAAAGCATGCCTCTGTTATTTCGTCATACAAGAAGAATCAACCGGCTGTAGAAGTTCTGGATGTACTGAGCCACTATTATACCACAATGCAATACTCTAATAATTGGACTTTATCTTTGTTTTTTACATTGTTAAATGTGGCCGCTATCAATTCTCAAGTGGTGTGGTGTTATCAGAAATTGGGAACGACTGTGCACAGAAGATATTTCATACGCTCGTTAGCTCTGAACTTGATGCAGAATAATGAATTAAAACAGAGTAATGTTAAAAAACCAGTTTTAAATTTGAGCATTGTTGAAAATGGGGGTGAGAGTGAGAGAGAAGATGGAGATTTAAACGAGTATGATGAAGATGATGAACAACAATTCACCAAGGTACCATCTATGCCTGAAGTTTCCATAACGGTAATGCGACCTTCGGGTGAAACTCTTCACGCTCGGCAGGGTATTCAACAACTCGCCTCTAAGGATTGTCTCGTGTGCGGACGTTCTTATCGCTATTCCCACAATGCGCGTAGACACGAACTCAATTCGCATAATTTTGATCGATACACTAACAAAGTCGTTTCAAAGAAACCTAAACTGCGACCTAACCCATTCAATCCTAAAGCCAGACTAATGCCAAATTCTGGTAACAAAATGCAAATGTTCTGCAAGACGACCCCTTCAAAAATGGTACCGCATAAGGTTATACCACAACCGAAACCCATACCTATAAAACCGATCCAGAATAATTTACCATATCCTCTAAGAATAAAAGCATTGAAAGATTTACAAATAAAGAAAAAGGAGCCACAAATTTTGAAAACGCTTCTAACTAGCAAACCCGAAATATTAGTTTCTGAACCTGAAATTTTAAATTCTGAGCCTGGGAGTCCAGAGACATTGATTTCTGAACCGGAAATCGCATCATTCCAAGTAGAAACTATATTGTCTGAACCTGATAGTTTTGATCACCCGATTGATGATGATGAAATGAATGGCGATGGAGAGATGCCAAAAATAAAATCGTATGTCACTCCTGATATAGAGTCGGATAGTGAGATGGAAATTGCGAAAGAATGTCGAGATGGGGATGAAAATGTAGCAACAGAGAAGGGTGACGACATCAATGAAGATGTTGAGGAATCTAACAAATTGACTGAGAATGACAATAATAATGATGATCATGAAGCACCTGACGATGCTGACGCATCAAAAGATAAAATAACTGAGGATTGTGAAGGAGAGGAGCCTATCAAGGATCAAACTGAAGAAGTTGGCGATGGTGACGACAGCGGTAATCAACCAAAAATAGACGGTGAACAAACGAATAATGTGTACGAAGGTGAATGTGATGATGAAGAGTCTTTAGTGATCACGCCCGTTGTTGAAATTAAAGAGGAAGTAAATACAGGTGATGAAGTAGACGACAATTACGAAGAAATGGGTGATGCTGGAGATGTTGATGATACAGGTGCAGCAAAAGAGGAAGAAGTCGATCCTAATAAAGTGTTTGTTACGAAAACACAGTATGAGTTTATTTCGAAATATCGCAACATTATCGAACAGGTGAACACACAACGCTGCTTGTGCTGCAACAAAGTATACGCACGTAGGAAACAGGTCATACAACATTTACAAAAGAATGGTTACAAAGTACCGAAACACACCTGCTACAATTGCGTTAACACTTTCAGCCACCTCGGTGCGTTGCTCAGTCACATAAGATCAAATGCCTGTACAAATCTATGGAGAGTCATCTATAATGAAAACGGCGTTACTGAAGACATGATCGCCAAACAGCAGGAGAATCGTGATCCCAAATTCCTTTACAAAGATCTTTTCAATGCCAGATCCTATGCCTGTAAAATTTGCCACTGCAAATTTCAACTAAAACAATTTATAATTAAGCATATCTTGGAGGTTCACGAGGATGGTCAATCGATGGTGCCTCTCGTTTGTGTACATTGTCGCACTCGGTTCAAGGACAGGACGCTGTGGAAGAAACACACACGTAAAGGTGAATGTATAATTGCTGTCGCATGCGACATGTGCAGTATGAAGTTTCAAACGGTTCACGAGCACAACGAACATGTCATGTCTGTGCACGTCGGCGAAGATTCGCAAAGCTACACCAATCAAGCTAGGAATGTCGATGATAGACCCACCGATTGCTCAATTTGTGGAAAGAGTATTTCTAACTACGCCACATTAGTTAGACATTTAAGGACGATCCACGGTGAAGAGAAACCGCATTCCTGTCGGCATTGTGACTCTAAATTTGAGCACGCGGACGAACTCGACCAACACGTATTTAGCGAACATTCTGACAAAACTCTCAGCACTTCGTCAGATTTTGTTGATACTTCTCTGGTTAAAGAAGAAGTAGAAGAATATCATTATTCTTGCACTGAATGTAACGCTATATTCGAAACGGTGGACGCCTGGACCGATCACCAAGTGGACGAACACAACCAAGTCGCTCATCATTGTGATCAATGTGAGAAGAAATTCTTACGACCGTCTGAGCTCGCTGAACACAAAAATACCCACTTACGTGTCAAATTCTACCCTTGCACGTTATGTCCTGATTCATACAATACACCTCAGAAATTGTCCGAGCACATGAAGCAGTCGCATCCTGGTGAATTGGTCGATAATAATGAATTTTCATGCGACATTTGCGTGAGAGATTTCAAGAGTCGACAGGCTTATTCTAATCATATGCGTATTCATGCCAAAGTGCCGACCACCAACAGAAAGCCTGGAGAAATGAAAGGATTTTCACCTCAAATTATTGGGAAACCGATCAAGCAATTCTCGATACCCGGCATCGGTAACGTGCCCTTCAAGACTAACCTGTCCGTGCCTAGCGCACCGTACGCTTGTGATATATGTGGAAAAGGTTTCATGCACAAAAAGAACATTTGGAAACACAAAAAGGTGTTGCATGCGGACATCATCGGGGAAAAGAACAATGAGAGCGAAGAGTATGTGATGCCGCCGACCACTGAAGATGACGACTTCAACTATGATGAGAATGGAATCGGATTGTCCACACCACAATTTAATAGCTTTAATTTCGCTAATTTTGCCAATACCACTCCACAAGAGACGGTGCAGTATACATGCGAATTGTGTTACAAGAAGTTCCCATTGAAGAGCAGTCTGTGGAAGCACAAACGAGCAAAACATGGAATCTCTTGTCCCTCCAGCTCGGAAACCCAAACGTTGTCTAACAGCGGCGAGGATGGTAGAAGATCGAGTTGTACTATATGCAAGATCACATTTGCTGACAAAAAGTCTTATTATAGACACAGAAAAAATGTTCACAAATCAAATGTGCAAATGTGTAAAATATGTGGCAAACCATTGAATTCCACTCTAGAGTTATATGAACATTTAAAAGCCGCGCACGCTCGGGAGTTGTTGGGATACAATGCTAACCAAGGAAGCAGCAAACAAGAGGTTCATCAGCCTATGAAGGATGAAAGCGAAATGGACGCCGATTTCGAAGCTAACGATCCACCTGCCGAATACCAAGCGCACTATCCGTGCGACACGTGCGGAAAGCAATTTGTCGGTTTGTTGGCGTTGCAGAATCATCAGTGTCTCAACCAATCGTCTCAACCGCAAACGTTCGATTGTGAGATATGTCACAAGAGCTACACCTCTATAGCGGCATTGAAGTCGCATCGAGGATGGCATTTACGGTCGCCGGACGGGAAAGCGGCGGCGAACAATTCTGGACTTTGGATGCCCCAACATAAAGTGACGAGCAAAGTGAGTAAACATGAAGTGGTCGACGCTTCGCAACTCGCTCGGGTCTCGATGCCCACGAACGTTAAGAGGAAGCTGCCTCCGGAGGTAGAAGTCACCGTTGTCAATCCTAACAAGAAAATGAAATCGGACGACGCCGATTACGAGCCGACCTCGTATGGCGGACCGGAAGATAAGTATTGTAAAATTTGTGACAAAGAGTTCACTAAGCGTGCTGCATACCAGAGACACATGGACGAAGTTCATCGACCGAATTCCGTATTCTGTCCCGTTTGTGATAGAAGTTTCACACGGAAATCGACGCTACTCGTTCACATGAGGAAGCATTACGGCGACGAGGAAGGTGCGGGGTCGGCGACGGGTTCCACCACGTCCCCCACGGCCGAGGACGAGTGTCACTCGTGCGATCTGTGCGGTGCGCAATATCACTCTGCTAAAGCGTTGAGGGCTCATCGCGTCCGTCATCACGGCGAGGAGTCCGCGGAGTCCGAAGAGGAGGGCTCGGTCCCGCCGCCCGGCGAGTTCACGTGCGCTCAGTGCGGAGACGGCGTGGCCAGTCCTCGTGATCTGATCGCCCATCGCACCATGCACTGCACACCCTCCAAGTACTTCTGCAACGTATGCAAAGTGTTCTTCAGCAGCGGCAATAACCTCTCGATGCACACACGCGCACGACACTCTGAAGTCGACAAGTCTTTCTACCCGTGCGCCATGTGCGACAGGTTTTTCACGAACAAAAAACATCTACAACGGCACATAGAGTCGTCCCATTGA
- Protein Sequence
- MSVNFECVCRLCLSSRGELSPIFPTTSADESGPAVLATKIKDCVSVNINENDELPTNVCKKCLDNVNNWHTFKEICEKAQNKLLSLKNDVSLLEEVKVKDELCEEGYDDAVVIDGSYPEFEQNVTDSNKLQPEGPPILASLGLTPRSDKNYVDPRLDWQRVHAILDMVQEDEVIDSLQNTEECDAIQHSDHDSDTEAEVLSDIDRDYVECKDGYLSRDKRKFSKSKHSDSTLTNKPKINVMKRKMNMKYCSTPKDAWQLFFSEDLLELIVDATNENIRSNSNQCSTSVKELKALIGILYYHGIVRSVHHHRNELWDDRVGPAAIKNAMGHDRFEFLLKNLRFEKRQFDNLLDYDIMKQMRKVFEIFAHNCRTAFDIENVVVIDEIIVPVYGPCPFKYNIQRKNLCSGFKMVALVDPSNFYVSNLDIVTDSYHLPEEIVKKLVHHLTGSGRTVVMDSWYTSLAVTQKLLDDYRLYTIGALNPRDDLLPPLFLSRHRPKGTHMTAFVTNTTTLASFVNNRGKVVNVLTNHPRYYKRAHSKHASVISSYKKNQPAVEVLDVLSHYYTTMQYSNNWTLSLFFTLLNVAAINSQVVWCYQKLGTTVHRRYFIRSLALNLMQNNELKQSNVKKPVLNLSIVENGGESEREDGDLNEYDEDDEQQFTKVPSMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELNSHNFDRYTNKVVSKKPKLRPNPFNPKARLMPNSGNKMQMFCKTTPSKMVPHKVIPQPKPIPIKPIQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEILVSEPEILNSEPGSPETLISEPEIASFQVETILSEPDSFDHPIDDDEMNGDGEMPKIKSYVTPDIESDSEMEIAKECRDGDENVATEKGDDINEDVEESNKLTENDNNNDDHEAPDDADASKDKITEDCEGEEPIKDQTEEVGDGDDSGNQPKIDGEQTNNVYEGECDDEESLVITPVVEIKEEVNTGDEVDDNYEEMGDAGDVDDTGAAKEEEVDPNKVFVTKTQYEFISKYRNIIEQVNTQRCLCCNKVYARRKQVIQHLQKNGYKVPKHTCYNCVNTFSHLGALLSHIRSNACTNLWRVIYNENGVTEDMIAKQQENRDPKFLYKDLFNARSYACKICHCKFQLKQFIIKHILEVHEDGQSMVPLVCVHCRTRFKDRTLWKKHTRKGECIIAVACDMCSMKFQTVHEHNEHVMSVHVGEDSQSYTNQARNVDDRPTDCSICGKSISNYATLVRHLRTIHGEEKPHSCRHCDSKFEHADELDQHVFSEHSDKTLSTSSDFVDTSLVKEEVEEYHYSCTECNAIFETVDAWTDHQVDEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCTLCPDSYNTPQKLSEHMKQSHPGELVDNNEFSCDICVRDFKSRQAYSNHMRIHAKVPTTNRKPGEMKGFSPQIIGKPIKQFSIPGIGNVPFKTNLSVPSAPYACDICGKGFMHKKNIWKHKKVLHADIIGEKNNESEEYVMPPTTEDDDFNYDENGIGLSTPQFNSFNFANFANTTPQETVQYTCELCYKKFPLKSSLWKHKRAKHGISCPSSSETQTLSNSGEDGRRSSCTICKITFADKKSYYRHRKNVHKSNVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKQEVHQPMKDESEMDADFEANDPPAEYQAHYPCDTCGKQFVGLLALQNHQCLNQSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVSMPTNVKRKLPPEVEVTVVNPNKKMKSDDADYEPTSYGGPEDKYCKICDKEFTKRAAYQRHMDEVHRPNSVFCPVCDRSFTRKSTLLVHMRKHYGDEEGAGSATGSTTSPTAEDECHSCDLCGAQYHSAKALRAHRVRHHGEESAESEEEGSVPPPGEFTCAQCGDGVASPRDLIAHRTMHCTPSKYFCNVCKVFFSSGNNLSMHTRARHSEVDKSFYPCAMCDRFFTNKKHLQRHIESSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -