Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411272.1:1376411-1392183[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.011 0.63 10.6 1.3 1 23 265 288 265 288 0.96

2 29 0.56 31 5.3 0.1 2 23 314 336 313 336 0.93

3 29 0.014 0.75 10.4 4.2 2 23 359 380 358 380 0.96

4 29 0.006 0.33 11.5 0.4 1 23 384 406 384 406 0.95

5 29 6.4 3.6e+02 2.0 1.4 1 23 412 435 412 435 0.90

6 29 0.0067 0.37 11.3 1.8 2 23 441 463 440 463 0.97

7 29 0.013 0.71 10.4 0.3 2 23 469 491 468 491 0.97

8 29 0.034 1.9 9.1 0.8 1 23 497 519 497 519 0.96

9 29 0.58 32 5.2 0.1 1 14 525 538 525 541 0.91

10 29 0.01 0.58 10.7 1.0 1 23 592 615 592 615 0.97

11 29 1.4 77 4.0 0.0 2 23 641 663 640 663 0.93

12 29 4.5 2.5e+02 2.4 4.3 1 23 686 709 686 709 0.97

13 29 0.0018 0.099 13.1 0.5 1 23 713 735 713 735 0.96

14 29 0.00014 0.008 16.6 1.5 1 23 741 764 741 764 0.98

15 29 0.031 1.7 9.2 0.6 2 23 771 793 770 793 0.94

16 29 0.0037 0.2 12.2 0.5 2 23 801 823 800 823 0.96

17 29 0.0014 0.077 13.5 3.9 1 23 829 851 829 851 0.98

18 29 6.4e-06 0.00035 20.8 1.2 1 23 857 879 857 879 0.99

19 29 0.00022 0.012 16.0 4.0 1 23 885 908 885 908 0.98

20 29 0.0048 0.27 11.8 0.8 1 23 964 987 964 987 0.96

21 29 0.66 37 5.1 0.1 2 23 1013 1035 1012 1035 0.94

22 29 1.9 1e+02 3.6 4.3 2 23 1059 1081 1058 1081 0.95

23 29 0.0095 0.53 10.9 1.1 1 23 1085 1107 1085 1107 0.93

24 29 0.0035 0.19 12.2 1.2 1 23 1113 1136 1113 1136 0.95

25 29 0.01 0.56 10.8 2.2 2 23 1143 1165 1142 1165 0.94

26 29 0.14 7.5 7.2 0.6 2 23 1173 1195 1172 1195 0.96

27 29 0.0014 0.077 13.5 3.9 1 23 1201 1223 1201 1223 0.98

28 29 2.3e-06 0.00013 22.3 1.8 1 23 1229 1251 1229 1251 0.99

29 29 0.00029 0.016 15.6 3.8 1 23 1257 1280 1257 1280 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.011	0.63	10.6	1.3	1	23	265	288	265	288	0.96
2	29	0.56	31	5.3	0.1	2	23	314	336	313	336	0.93
3	29	0.014	0.75	10.4	4.2	2	23	359	380	358	380	0.96
4	29	0.006	0.33	11.5	0.4	1	23	384	406	384	406	0.95
5	29	6.4	3.6e+02	2.0	1.4	1	23	412	435	412	435	0.90
6	29	0.0067	0.37	11.3	1.8	2	23	441	463	440	463	0.97
7	29	0.013	0.71	10.4	0.3	2	23	469	491	468	491	0.97
8	29	0.034	1.9	9.1	0.8	1	23	497	519	497	519	0.96
9	29	0.58	32	5.2	0.1	1	14	525	538	525	541	0.91
10	29	0.01	0.58	10.7	1.0	1	23	592	615	592	615	0.97
11	29	1.4	77	4.0	0.0	2	23	641	663	640	663	0.93
12	29	4.5	2.5e+02	2.4	4.3	1	23	686	709	686	709	0.97
13	29	0.0018	0.099	13.1	0.5	1	23	713	735	713	735	0.96
14	29	0.00014	0.008	16.6	1.5	1	23	741	764	741	764	0.98
15	29	0.031	1.7	9.2	0.6	2	23	771	793	770	793	0.94
16	29	0.0037	0.2	12.2	0.5	2	23	801	823	800	823	0.96
17	29	0.0014	0.077	13.5	3.9	1	23	829	851	829	851	0.98
18	29	6.4e-06	0.00035	20.8	1.2	1	23	857	879	857	879	0.99
19	29	0.00022	0.012	16.0	4.0	1	23	885	908	885	908	0.98
20	29	0.0048	0.27	11.8	0.8	1	23	964	987	964	987	0.96
21	29	0.66	37	5.1	0.1	2	23	1013	1035	1012	1035	0.94
22	29	1.9	1e+02	3.6	4.3	2	23	1059	1081	1058	1081	0.95
23	29	0.0095	0.53	10.9	1.1	1	23	1085	1107	1085	1107	0.93
24	29	0.0035	0.19	12.2	1.2	1	23	1113	1136	1113	1136	0.95
25	29	0.01	0.56	10.8	2.2	2	23	1143	1165	1142	1165	0.94
26	29	0.14	7.5	7.2	0.6	2	23	1173	1195	1172	1195	0.96
27	29	0.0014	0.077	13.5	3.9	1	23	1201	1223	1201	1223	0.98
28	29	2.3e-06	0.00013	22.3	1.8	1	23	1229	1251	1229	1251	0.99
29	29	0.00029	0.016	15.6	3.8	1	23	1257	1280	1257	1280	0.98

Sequence Information

Coding Sequence: ATGAATGTAACTACTAATAAACGTCGTTGTCGATGTTGTTATGCGCAAGGGACGTTCAAAGATTTGATTTCAAGTTATCTGTGGTTGGGAGAGAGCGAAGTATATGGAGATATATTAAAAGAATGTTTCAATGTTCACTTAATAAATGTAGCAGATGTCGAATCGAGTGGAATATGTGATTTATGTATCTTAACACTAAGGAATGCAAATAAATTCAGAAATCGGGTTTTGCAATCGGAGCAACTTTTTAAGAAATATATATCAGAAGCTAAAAGAACAGTAAAATTAGAATCGGTGGTGAATAATGATAATGATCTTGACAATGCTGAAAATGCCGATAACGCTGAAACAGGACAAGACCCTGAAACAGTGAAGTTCGAATGTGAGATTAGTGATGATGAAGCTGCTGACAATGATGAGTCGGAGCAAGATTCAGAACCAGCAAAAAAATCAGTCAAACTCGAATCGGCCGTTAGTGATGCAGACTATGGTGAACCAGATCAAGATCCTGTACCAGATTACATTGATAACAATTTTGCCGAAATCGATGTACCAATTAAGGCCGAAGTTAACATAGAAACTGAAGTCAGGAAAAAGAAAAGGAAACGGAAGGTTAAATACGATTCGGATGCGTCTGAAAAAAGGCACGGCATCCAAGGCGCGGTAGATGAGGCTACGTTCCGTTACAGCAAGGAAAAAAAAATATCAGAAATTCAGAAACAATACCATAATTTAAAGCAAATTTTGCAGTATTCGAATGCGACTCCCTTTAGAGGGCGAGATGTTTTTGGTTATAATTGTGCATTTTGTGATAATTCCTTTCAAGATCCGATCGATTTGAGAGCGCATACCAAAAATTGTCACTTTCAAGATAAATTATTTTACAAACAAGGACACAGTTTGATAACTTTCAGTGCATTTTTAGATATATACGATTTAATGTGTACAATTTGTGAACAGTCCGTGATAGATATTAAAACGTTGAGTGAACATTTGGTCAAAGAGCATGATAAGATGTATTACGAAGACGTCGCTGACTATTTGCAACAGTTCAAATTGAATAAAGAATCGTTACAGTGTTGCCAGTGTAAAAAAATATTTAATAGTTTTAAAATGTTGGCGCagcacatgaattttcattatagtaattttttgtgctcagtctgcggctcaggcttcgttaatagataccgtatggagcgacatttggagacgcattcgaagaagagttttttcgcttgtctttattgtgcggaaacgtttcaaagcgatcataagaggcgtgcgcatgttgagaagcaacacacgaattaccgtaataaatgcagtttgtgtaacgaaagattttctaattactaccagaaatctttgcacatgaataaagtccacaacgtcgacaagcaacagtgcaaggcttgcgagaagcaattcgtggcgcgtaatttattagaactccatataagaagggatcatttgttagagcgtgatttcgaatgcgaagtttgtaggttgagatttttcacaaagaaacgcttggccgaacaccgagttgttcacacgcgcgaaaaggatttcaaatgcgagatttgtgagagattgtttgctaggaaacGTTCAGCCGTGAAAAGAATAATATTAATTCCGGCGAGAGAGACACCGACGATAAAGCTCGTTAAAAAAATTGAACCTGAGTTAAAACCGCATTTGTTTAACCTCCATGCTATACTCGAGCATTCGAACGCGACTCCCTTCAACTTAGGCACCGATATGACTTTCTATTGCGAGCTTTGTCTACACAATTTCCCACAAGCTTCTGTACTGAAGAATCACATTTTAAAATCGCATACCGACGACAAATTAATATATATGTGCGACGCAAAACTAAGAGAGTACGCCCCAaaactcgacataacctctctagaatgcaacatttgcgcgggaaattttgacaaaatagaatcgcttatgacgcatttaattaacgtacacgagaaacagttgtacacgaatttaaataatcatattttacaatttaaattcgattcggtagacagttttagatgcgtttattgttcgttagagtttaatcttgttagacgattacatttgcacatgtgcaaagtgcattataggaattatttgtgcgataaatgcgatagcgctttcataaacgaacgacttctacaaaatcatgttaaaaaacatacaaatgttggaacattcaaatgtagcgaatgtaacaaatctttcgatagttcaatcaaaagaaacagccatataaagactgcccatcaaaatcactatcgttggaaatgtccgtattgttcagaaagaattaaatcttattcggaacgtaggaaacatatttcgcaagttcacggttatgcaactcctttacttaaatgccaagcatgcgaggaaacattcgaagaagcctctaaattgacgtcgcacataaaaagattccaccttatggagcgccaacacaagtgtagtgaatgcggcatgggattccattttaagaaaggattgcgcgatcacatgatcaagcatacgggctctagagactttaaatgtagcgtttgttctaaagcgttgtcgaggaagaaaactttgatacaacacatgagaattcacacgaacgacagaaggtttaaatgtagttattgtgaactcgcatttattcagaaatgcagtttgcgttcccatttgagaagcaagcacgGTTCCGCCGTGAAAAGAATAATATTAATTCCGACGAGAGAGACACCGACGATAAAGCTCGTTAAAAAAATTGAACCTGAGATAAAAGCACACTTATTTAACCTCCATGCTATACTCGAGCAttcgaacgccactcccttcagatcgactgtcgatatgatgacatttaaatgcgcgtattgcgtagaacatttcccacaagcgccgctattaaaaaatcacacaataaaatcgcattccgccgacaaattaaaatatatgtgcgacgcaaaattaagagaatacgccccaaaactcgacataacctctctagaatgcaatatttgcgcgggaaattttgacaaaatagaatcgcttatgacgcatttaaataatgtacacgagaaaacgttatttacgaaattaaaaaatcatattttacaatttagattaaattctttagatattttgagttgtgtttattgttcgcaagaatgtattacttttaagagattgcaggagcacatgtgcaaagtgcattataggaattatttgtgcgataaatgcgacagcgcgttcataaacaaacgccttctacaaaaccatagttacaaacataaaaaacaaggaatatttaaatgtagcgaatgtaacaaaaccttcgatagtttaattaaaagaaacgcccacgcgaagagtagccatcagaataattgccgttggaaatgtccatattgtacagaaagatttaaatcttatcgcgagcgtaggaaacactttttaaaggtacacggttatacaactcctttacttaaatgtcaagcatgcgaggagacgttcgaagaaaccactatgctgacgtcgcacgtaaaaagattccaccttatggagcgccaacacaagtgtagtgaatgcggcatgggattccattttaagaaaggattgcgcgatcacatgatcaaacattcgggtttgaaagactttaaatgtaacgtttgtttgaaagccttctcgaggaagaaaactttaacggaacacatgaaaatacatacgaacgacagacgatttagatgtagttattgtgagctcgcatttattcagaaatgcagtttgcgttcccatttgagaagtaaacatggtgaagaTTCTTGA
Protein Sequence: MNVTTNKRRCRCCYAQGTFKDLISSYLWLGESEVYGDILKECFNVHLINVADVESSGICDLCILTLRNANKFRNRVLQSEQLFKKYISEAKRTVKLESVVNNDNDLDNAENADNAETGQDPETVKFECEISDDEAADNDESEQDSEPAKKSVKLESAVSDADYGEPDQDPVPDYIDNNFAEIDVPIKAEVNIETEVRKKKRKRKVKYDSDASEKRHGIQGAVDEATFRYSKEKKISEIQKQYHNLKQILQYSNATPFRGRDVFGYNCAFCDNSFQDPIDLRAHTKNCHFQDKLFYKQGHSLITFSAFLDIYDLMCTICEQSVIDIKTLSEHLVKEHDKMYYEDVADYLQQFKLNKESLQCCQCKKIFNSFKMLAQHMNFHYSNFLCSVCGSGFVNRYRMERHLETHSKKSFFACLYCAETFQSDHKRRAHVEKQHTNYRNKCSLCNERFSNYYQKSLHMNKVHNVDKQQCKACEKQFVARNLLELHIRRDHLLERDFECEVCRLRFFTKKRLAEHRVVHTREKDFKCEICERLFARKRSAVKRIILIPARETPTIKLVKKIEPELKPHLFNLHAILEHSNATPFNLGTDMTFYCELCLHNFPQASVLKNHILKSHTDDKLIYMCDAKLREYAPKLDITSLECNICAGNFDKIESLMTHLINVHEKQLYTNLNNHILQFKFDSVDSFRCVYCSLEFNLVRRLHLHMCKVHYRNYLCDKCDSAFINERLLQNHVKKHTNVGTFKCSECNKSFDSSIKRNSHIKTAHQNHYRWKCPYCSERIKSYSERRKHISQVHGYATPLLKCQACEETFEEASKLTSHIKRFHLMERQHKCSECGMGFHFKKGLRDHMIKHTGSRDFKCSVCSKALSRKKTLIQHMRIHTNDRRFKCSYCELAFIQKCSLRSHLRSKHGSAVKRIILIPTRETPTIKLVKKIEPEIKAHLFNLHAILEHSNATPFRSTVDMMTFKCAYCVEHFPQAPLLKNHTIKSHSADKLKYMCDAKLREYAPKLDITSLECNICAGNFDKIESLMTHLNNVHEKTLFTKLKNHILQFRLNSLDILSCVYCSQECITFKRLQEHMCKVHYRNYLCDKCDSAFINKRLLQNHSYKHKKQGIFKCSECNKTFDSLIKRNAHAKSSHQNNCRWKCPYCTERFKSYRERRKHFLKVHGYTTPLLKCQACEETFEETTMLTSHVKRFHLMERQHKCSECGMGFHFKKGLRDHMIKHSGLKDFKCNVCLKAFSRKKTLTEHMKIHTNDRRFRCSYCELAFIQKCSLRSHLRSKHGEDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -