Tpel004817.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- Znf335
- Assembly
- GCA_948150575.1
- Location
- OX411272.1:1183565-1196567[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.065 3.6 8.2 0.0 3 23 75 96 73 96 0.91 2 33 0.22 12 6.5 0.5 2 23 105 127 104 127 0.89 3 33 2.4 1.3e+02 3.3 0.5 1 20 131 152 131 156 0.82 4 33 0.009 0.5 10.9 1.0 1 23 163 186 163 186 0.98 5 33 0.12 6.5 7.4 0.0 1 23 236 259 236 259 0.95 6 33 0.006 0.33 11.5 0.0 1 23 352 375 352 375 0.97 7 33 0.057 3.1 8.4 1.7 1 23 380 403 380 403 0.95 8 33 0.18 9.9 6.8 0.3 1 13 439 451 439 453 0.90 9 33 2.3 1.3e+02 3.4 2.5 2 23 497 518 496 518 0.94 10 33 0.0047 0.26 11.8 0.7 1 21 617 637 617 638 0.95 11 33 0.038 2.1 9.0 1.6 2 23 709 730 708 730 0.97 12 33 0.00021 0.011 16.1 0.6 1 23 734 756 734 756 0.96 13 33 5.3 2.9e+02 2.2 0.2 1 11 761 771 761 782 0.88 14 33 0.0061 0.34 11.5 0.6 1 23 790 813 790 813 0.96 15 33 0.00016 0.009 16.4 1.1 1 23 820 843 820 843 0.98 16 33 4.9e-05 0.0027 18.1 2.4 1 23 850 872 850 872 0.98 17 33 1.9e-05 0.001 19.4 0.5 1 23 878 900 878 900 0.99 18 33 0.00025 0.014 15.8 0.9 1 23 905 928 905 928 0.95 19 33 0.18 10 6.8 0.9 1 23 994 1017 994 1017 0.92 20 33 0.15 8 7.1 0.0 2 23 1044 1066 1043 1066 0.93 21 33 0.00037 0.021 15.3 0.8 1 23 1088 1110 1088 1110 0.98 22 33 4.2e-05 0.0023 18.3 0.6 1 23 1114 1136 1114 1136 0.98 23 33 1.7 96 3.7 1.5 1 14 1141 1154 1141 1164 0.85 24 33 0.14 7.5 7.2 0.4 1 23 1170 1193 1170 1193 0.93 25 33 0.12 6.7 7.4 4.4 1 23 1200 1223 1200 1223 0.96 26 33 5.2e-05 0.0029 18.0 0.5 1 23 1229 1251 1229 1251 0.97 27 33 2.6e-05 0.0014 18.9 1.6 1 23 1389 1411 1389 1411 0.99 28 33 0.0024 0.14 12.7 1.2 1 23 1415 1437 1415 1437 0.97 29 33 0.14 7.5 7.2 0.6 1 23 1442 1465 1442 1465 0.89 30 33 0.057 3.1 8.4 1.2 1 23 1471 1494 1471 1494 0.86 31 33 2.1 1.2e+02 3.5 0.3 3 23 1502 1523 1500 1523 0.94 32 33 0.0013 0.07 13.6 0.9 2 23 1530 1551 1530 1551 0.98 33 33 1.1e-05 0.00059 20.1 0.9 1 23 1556 1579 1556 1579 0.97
Sequence Information
- Coding Sequence
- ATGTTGAATTGTCGCATTTGTAAGAGACAACTGGATGATGTAAATGAGGTTTTGCATCATTTGAAAGATGTCCATCATAAACCGGTCGATTTGAAAAAATCTGTAGGCGTGTTGCCCTTCAAGTTAGTCTATAATAATTGGGAGTGCGCACTTTGTCGCGAACATTGTTTGACGTACAGGCGACTCGTAGCGCATACTATGATGCATTTACACGACTCCATTTGTGACACTTGCGGCAACAGTTTTCCCCTCGCAAAAGATTTAATCGAACACATCGATGCGGTACACAGAAAAGTTCTAAAGCGAAATGTTAAATGTCCTCGTTGTACGCAGAAATTCGAGACGTTTGCCGAAATGAGAGAGCACAAAGCCGCACGACACGTGAACAGATTTTATTGTAAATATTGCGAGGAGCCGGTCTCGTTCTCGTATTGGGACGCTCGTTTCAGACATTATGTCGATGTACACAATGTACAGGATAGAAAGTACAAATGTAACATTTGTAATGTGGATTTCGAGTCTCGTCGCGCTAGGTACAGCCATATGATGAAGTTACATGCGGGGCCGTCTACGTCATTACACGGGAAGACTACCGCATTAGCGAATAGCAGGCCAATCGAGCCACCGACCGTTGACCCTAGAGAGAATGCAAAATTAATACTTAAATATTCGACCGCGTTCCCGTTTCGTAATTCGTTTAATAGCTTTTCTTGTCCGTTTTGCGTCGTACAATTTGCCGAACCGGCTTCGTGGAGGATACACATGAACGATAATCATAAATGCTATAATTTATCACACGCCTTTCGTCGTCAGAAGTGCGTGAAAGTTGACATTTTTGAATTGTCTTGTAGAATTTGTTCGAAGGATTTGAACGGTATCGAGGATGTCTTATTGCATCTTAAAAATGAACATGACATGAAAGTTGATATGGACAAGCCTTCCGGTGTTATACCGTTCAGGTTGGACGTGAACAACTGGTCTTGCGTTTTCTGTAACGAGAAATTTTTATTCTTTAAACATCTGAAAGACCACACGATCAAACACATTCAAAACTTTGTGTGCGACACTTGCGGCTCCGGGTTTGTGGTTGCGAAAGATCTGGAACAACACGTCGAGACTATGCATACGGCTAAGAAATTCAACTGTACCAAATGCAGCGAGGTGTTCGCGAGTTCAAAAGATTGCGAAAAACATAGAGCAATGGCGCATAGACACGTTTTTAGATGCTACGTCTGTAAAGAGCGACCAGTTTTCAAAAATTGGGACCATAGATACAGACACTATGTTGAAGAGCATAGCAGTAAATTGCGAGTTTATaagtgtaacatttgcgatcaagatttcgtcacacggaaagctagGATCTGCTTGAAAGAGTTGAACGGACTCGACGATCTCTTGTTGCATTTGAAGAGCGATCATAATATCAAAGTTAATATGAACAAGCCCCTCGGTGTAATACCGTTCAAATTGGACGTGAACAATTGGAGATGCGTCTTTTGTGACGAGAAATTCTTGTACTATAAACATTTGAGGGACCACACAGTCAAACATATTCATAATTTTATATGCGATGCTTGCGGTTCCGGTTTCTTAATCGCTAAAGACTTGCGACAGCACGTCGACGCCGTACATACGTCTAAAAAGTTCAAATGCTCCAAATGCGGAGCGACCGCGAAACCGGATTTGCGGGATTCTAACAGCGCGGACGATCTTGAAATTTTTAAGAATACTAGCAAGTACTATCGGAGGACTGAACTATCAATGGCTAGATTTAACACTAAAAGGAACGCTATCATTATTCTTAAATGTTGGTCTGTCGCACCTTTCCGATGGCATCGTAACAGATTCAAGTGCTCCTACTGCGATTCGAACTTCACTGAAACAGATCAACTTCGATCGCACGTTAAGGAATGTAGCGAAAAGCATGACGTTAAAGATATTTATAAAAAGTTTAAAGAAATGGCGATGATTAATATCGATATTACAGACGCTAAGTGCCGTTTTTGTGATGCTAATTTTGAGTTGAACGATATGAAAACTCATGTCGCAAAGCATGACTTCTCACTCAATCCTGATCATCCAGACGGAGTCATACCGTTCGAACTCGATAAGGACTCTTGGCGTTGCTTAAACTGTTCTAAAGACTTTAATAACTTTCTTAAACTGTACAGTCATATGAATTCCCATTATCAGCACTACGTTTGTGACGTATGCGGTAAGGGATTTATGACTGCGCACAGGTTGCGACGCCATTCTGAAGTCCATGTTTCCGGTTCGTTTCCTTGCGACGTTTGCGGCCTAATATTCCCAATGCGGGCTGCCAGGGAGTGCCATAAAATTAATGTACATTCAAAAAATCCTAGATACGAGTGTCCAAAGTGTTCGGTTAGATTCGAGGATTACTATGAGAGGATGAGACATTTAAAAGAGGAGCATAGAGAAAAGGAGATAATCTATAAATGTGATTATTGCAATTTGGCCTTTAAGACGAGCAGCAAAAGGGCTGCCCATGTTAGATCTACACATTTATGCGTACAAATCGACTTTCCTTGCCCCCAATGCGAAAAGAAGTTTAAGAGTTCGTTCCGGTTGAAATCGCACATGAGTAGGCATAGTGGGGAGAGGTCGTTCCGTTGTAGTGTGTGCGGCAAAAGTATGGCTTTGAAGGCGTCTCTTCAAAGGCATATGAGAATGCATGAAAAAGTTAACTTTCCTTGCAAATTGTGCGGCCGTGTCTTTGTTAACAACGCTAGATTGGTTAAGCATGTGAATCAGTGTCATATGAAAGGTACAAGAGGGGTAGGTAGAAAATTAAAGGAGAACGTATCGGCTCGTACACTTCTACGGAGGAGGCGGGCAAACAACGAATTGCCAGAAGAGTCTGACAGACGTATCGCTAAGACTTATATGAGAAGAAACGCTATCACTATTCTGGAATGTTCCACTTGCTGGGCGTTCAGATGGTGCAGAAACGCGTTCTTTTGCTCCTATTGCGACACGAAATTTCTAGAAAAAGAAACACTCATTTCTCACGTGCTAAATAATCATTTGTCTGAATCTCCGACTTTGGGGATATTCTCGAAAATCACAGAAAATAATATGCTGAAAGTCGATGTTAGTGATTTGAAATGTCGTCTTTGCGGGTTAGCTATAGAAGATATCGATAATCTGAAAGCTCATTTGGTATCGATGCACGATAAAGTTTTAAACTTCGAGTACAGCGACGGTGTACTGCCGTTCAAGTTGGTGAAAAACAAATTCCCATGTCAGAAATGCGACGACACATTCGCAAATTTCTCGAAGCTAAACGAACACATGAATTCACATTACAAGAACTATATTTGCGATTTGTGCGGGAAACCGTTCGTCTCTAAATCTCGATTCCGGACTCATGTACAGTCGCACGAGGTGGGAAGCTTTCCTTGCGGGGAATGCGACGAAGTATTCGATACCAGGGTGACTAGAATGTGCCACAAGTTCAGGGTTCATAGGAATTGTATGCGATACGCTTGCCCTCGTTGTCCGGGGAAATTCTCGACGTACTACGCTAGGTCGAGGCATCTAATCGAGAAACACGACGAGGAGGTCAAAGAGTACTTTTGTAGTTTCTGCGACAGAAGTTTCTCGTCCACTTGTAAGAGGGCGGCGCATTTTCGAACGGCGCACAGGGTGAATGCTAATTTTGTTTGTGGCGTTTGTAAATTGAGTTTCAATAGTAAATCTCTTTTAAATAAACACGCTCTGAGTCATGAGCGGACGCGCGCGCAGAAAACCCCTGGCCTGAATGTCCGATGGCGTCGTAATAAACTGTACACAGATCAACGTGCGAACGCGTTTTTGTATATAAGTAGTTCGAATGTCGTGCCTTTCACGTGGTATAGCGGCCGTTTCTCCTGCATCTATTGCAAGGAGCCGATTTCCGACGTCAATAATATTAGAAGTCATTCCCTGACTCACGCGGATAGGCTGCAGGTTTTTGATAAATTGAGAACTTCTGTCGATTGTATTAAAATTGAAATTAGCGATTTGGAATGCATTATATGTAACGAAGCGATGGAGAGCTTCGATAAATTCAAATCTCATTTGATCGAGGCACACGATAAGGCTTTAGTCGAGAATCATAGCGATGGCGTCATCCCGTTTTCGTTTAGAAATAATCAATACAAGTGCGTCGAGTGCGGCGAGAACTTCACGCTGTTTTTTAATTTAAACAAACATATGAATAAACACTATCAGAGTCACGTTTGCGATTACTGCGGGAAAGGCTTCGCTGCAATACACAGGTTGAAGTCGCATATTTTGTCGCACGAGGTCGGCTCGTATCCGTGCCAGAAGTGCGGTTCCGTTTTCCGCACTAGGACTATTTGGTACAATCATCTGTCGAAAATTCACGGGCCTAAGAATAAGTACGCTTGCCCCCATTGCGATAAAAAGTTTCTCAATTATACGTTAAGAATAAATCATTTGAAGGAAGCACACGGTCTGAAAACCGAGTATGGATGCAAATTGTGTCCGGCTGTTTTTAAATTATTTAATGCTAGGACGAAACACGTTAAAAATGTCCATATACGGGAGAAGGTTAACAGGTGCCATATTTGTCCGTCGAAGTTTATCACGGTTGCCGAGTTAAAGAATCACCTGTTGACGCATGGTGACGAGAGATTCCAATGCGAGATTTGTAAGAAGCTTTTCACTAGAAAGAACGCTTTGAGGGTCCATATTAAAAATGTACACACGTTTCATGTTTCGAGTTGA
- Protein Sequence
- MLNCRICKRQLDDVNEVLHHLKDVHHKPVDLKKSVGVLPFKLVYNNWECALCREHCLTYRRLVAHTMMHLHDSICDTCGNSFPLAKDLIEHIDAVHRKVLKRNVKCPRCTQKFETFAEMREHKAARHVNRFYCKYCEEPVSFSYWDARFRHYVDVHNVQDRKYKCNICNVDFESRRARYSHMMKLHAGPSTSLHGKTTALANSRPIEPPTVDPRENAKLILKYSTAFPFRNSFNSFSCPFCVVQFAEPASWRIHMNDNHKCYNLSHAFRRQKCVKVDIFELSCRICSKDLNGIEDVLLHLKNEHDMKVDMDKPSGVIPFRLDVNNWSCVFCNEKFLFFKHLKDHTIKHIQNFVCDTCGSGFVVAKDLEQHVETMHTAKKFNCTKCSEVFASSKDCEKHRAMAHRHVFRCYVCKERPVFKNWDHRYRHYVEEHSSKLRVYKCNICDQDFVTRKARICLKELNGLDDLLLHLKSDHNIKVNMNKPLGVIPFKLDVNNWRCVFCDEKFLYYKHLRDHTVKHIHNFICDACGSGFLIAKDLRQHVDAVHTSKKFKCSKCGATAKPDLRDSNSADDLEIFKNTSKYYRRTELSMARFNTKRNAIIILKCWSVAPFRWHRNRFKCSYCDSNFTETDQLRSHVKECSEKHDVKDIYKKFKEMAMINIDITDAKCRFCDANFELNDMKTHVAKHDFSLNPDHPDGVIPFELDKDSWRCLNCSKDFNNFLKLYSHMNSHYQHYVCDVCGKGFMTAHRLRRHSEVHVSGSFPCDVCGLIFPMRAARECHKINVHSKNPRYECPKCSVRFEDYYERMRHLKEEHREKEIIYKCDYCNLAFKTSSKRAAHVRSTHLCVQIDFPCPQCEKKFKSSFRLKSHMSRHSGERSFRCSVCGKSMALKASLQRHMRMHEKVNFPCKLCGRVFVNNARLVKHVNQCHMKGTRGVGRKLKENVSARTLLRRRRANNELPEESDRRIAKTYMRRNAITILECSTCWAFRWCRNAFFCSYCDTKFLEKETLISHVLNNHLSESPTLGIFSKITENNMLKVDVSDLKCRLCGLAIEDIDNLKAHLVSMHDKVLNFEYSDGVLPFKLVKNKFPCQKCDDTFANFSKLNEHMNSHYKNYICDLCGKPFVSKSRFRTHVQSHEVGSFPCGECDEVFDTRVTRMCHKFRVHRNCMRYACPRCPGKFSTYYARSRHLIEKHDEEVKEYFCSFCDRSFSSTCKRAAHFRTAHRVNANFVCGVCKLSFNSKSLLNKHALSHERTRAQKTPGLNVRWRRNKLYTDQRANAFLYISSSNVVPFTWYSGRFSCIYCKEPISDVNNIRSHSLTHADRLQVFDKLRTSVDCIKIEISDLECIICNEAMESFDKFKSHLIEAHDKALVENHSDGVIPFSFRNNQYKCVECGENFTLFFNLNKHMNKHYQSHVCDYCGKGFAAIHRLKSHILSHEVGSYPCQKCGSVFRTRTIWYNHLSKIHGPKNKYACPHCDKKFLNYTLRINHLKEAHGLKTEYGCKLCPAVFKLFNARTKHVKNVHIREKVNRCHICPSKFITVAELKNHLLTHGDERFQCEICKKLFTRKNALRVHIKNVHTFHVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -