Basic Information

Insect: Tinea pellionella
Gene Symbol: -
Assembly: GCA_948150575.1
Location: OX411272.1:1394803-1409976[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.61 34 5.2 3.8 1 21 238 260 238 262 0.68

2 32 0.077 4.3 8.0 0.1 2 23 290 312 289 312 0.96

3 32 0.00032 0.018 15.5 0.5 3 23 362 383 361 383 0.91

4 32 0.22 12 6.6 0.2 1 23 388 411 388 411 0.92

5 32 4.5 2.5e+02 2.5 1.5 3 23 415 436 413 436 0.92

6 32 0.0025 0.14 12.7 1.0 1 20 440 459 440 461 0.94

7 32 0.0066 0.37 11.3 1.4 1 23 513 536 513 536 0.96

8 32 6.2 3.4e+02 2.0 0.0 2 23 562 584 561 584 0.79

9 32 0.031 1.7 9.2 0.6 3 23 608 629 607 629 0.96

10 32 0.00029 0.016 15.6 1.8 1 23 634 657 634 657 0.97

11 32 0.024 1.4 9.6 0.2 2 23 662 684 661 684 0.94

12 32 0.034 1.9 9.1 0.5 2 23 690 712 689 712 0.90

13 32 4.3e-06 0.00024 21.4 2.4 1 23 716 739 716 739 0.98

14 32 0.00018 0.01 16.3 2.0 1 23 828 851 828 851 0.97

15 32 7.5 4.2e+02 1.7 0.3 2 23 879 901 878 901 0.93

16 32 0.019 1 9.9 0.6 3 23 925 946 923 946 0.92

17 32 0.00013 0.007 16.8 1.6 1 23 951 974 951 974 0.94

18 32 0.0067 0.37 11.3 1.1 1 23 979 1002 979 1002 0.96

19 32 0.0035 0.19 12.2 2.4 2 23 1008 1030 1007 1030 0.92

20 32 4.9e-05 0.0027 18.1 6.6 1 23 1034 1057 1034 1057 0.97

21 32 0.0017 0.093 13.2 0.4 2 23 1064 1085 1063 1085 0.97

22 32 0.0076 0.42 11.2 0.7 1 23 1091 1113 1091 1113 0.90

23 32 0.33 18 6.0 0.3 1 23 1168 1191 1168 1191 0.94

24 32 0.031 1.7 9.2 0.4 3 23 1223 1244 1221 1244 0.94

25 32 0.014 0.8 10.3 0.4 3 23 1268 1289 1267 1289 0.95

26 32 0.0012 0.065 13.7 2.2 1 23 1294 1317 1294 1317 0.96

27 32 2.6 1.4e+02 3.2 0.4 1 23 1322 1345 1322 1345 0.91

28 32 0.00067 0.037 14.5 0.8 2 23 1351 1373 1350 1373 0.94

29 32 0.0035 0.2 12.2 0.3 2 23 1381 1403 1380 1403 0.97

30 32 0.02 1.1 9.9 0.2 2 23 1410 1431 1409 1431 0.96

31 32 3.7e-06 0.0002 21.6 0.1 1 23 1437 1459 1437 1459 0.97

32 32 0.00011 0.0061 16.9 3.0 1 23 1465 1488 1465 1488 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.61	34	5.2	3.8	1	21	238	260	238	262	0.68
2	32	0.077	4.3	8.0	0.1	2	23	290	312	289	312	0.96
3	32	0.00032	0.018	15.5	0.5	3	23	362	383	361	383	0.91
4	32	0.22	12	6.6	0.2	1	23	388	411	388	411	0.92
5	32	4.5	2.5e+02	2.5	1.5	3	23	415	436	413	436	0.92
6	32	0.0025	0.14	12.7	1.0	1	20	440	459	440	461	0.94
7	32	0.0066	0.37	11.3	1.4	1	23	513	536	513	536	0.96
8	32	6.2	3.4e+02	2.0	0.0	2	23	562	584	561	584	0.79
9	32	0.031	1.7	9.2	0.6	3	23	608	629	607	629	0.96
10	32	0.00029	0.016	15.6	1.8	1	23	634	657	634	657	0.97
11	32	0.024	1.4	9.6	0.2	2	23	662	684	661	684	0.94
12	32	0.034	1.9	9.1	0.5	2	23	690	712	689	712	0.90
13	32	4.3e-06	0.00024	21.4	2.4	1	23	716	739	716	739	0.98
14	32	0.00018	0.01	16.3	2.0	1	23	828	851	828	851	0.97
15	32	7.5	4.2e+02	1.7	0.3	2	23	879	901	878	901	0.93
16	32	0.019	1	9.9	0.6	3	23	925	946	923	946	0.92
17	32	0.00013	0.007	16.8	1.6	1	23	951	974	951	974	0.94
18	32	0.0067	0.37	11.3	1.1	1	23	979	1002	979	1002	0.96
19	32	0.0035	0.19	12.2	2.4	2	23	1008	1030	1007	1030	0.92
20	32	4.9e-05	0.0027	18.1	6.6	1	23	1034	1057	1034	1057	0.97
21	32	0.0017	0.093	13.2	0.4	2	23	1064	1085	1063	1085	0.97
22	32	0.0076	0.42	11.2	0.7	1	23	1091	1113	1091	1113	0.90
23	32	0.33	18	6.0	0.3	1	23	1168	1191	1168	1191	0.94
24	32	0.031	1.7	9.2	0.4	3	23	1223	1244	1221	1244	0.94
25	32	0.014	0.8	10.3	0.4	3	23	1268	1289	1267	1289	0.95
26	32	0.0012	0.065	13.7	2.2	1	23	1294	1317	1294	1317	0.96
27	32	2.6	1.4e+02	3.2	0.4	1	23	1322	1345	1322	1345	0.91
28	32	0.00067	0.037	14.5	0.8	2	23	1351	1373	1350	1373	0.94
29	32	0.0035	0.2	12.2	0.3	2	23	1381	1403	1380	1403	0.97
30	32	0.02	1.1	9.9	0.2	2	23	1410	1431	1409	1431	0.96
31	32	3.7e-06	0.0002	21.6	0.1	1	23	1437	1459	1437	1459	0.97
32	32	0.00011	0.0061	16.9	3.0	1	23	1465	1488	1465	1488	0.98

Sequence Information

Coding Sequence: ATGGATTTCGATGAGATAGTTGTTAAGGACAGTCCTGGGTTGTGTAGATGCTGCCTTTCTGAAGGGTGTTATAAAGACCTCAGTACCGAGTACACTTGGATGGGAGAAAATGAGATTTACGCTGATATGTTATTCGAATGTTTCGATATAAGTATAACTCAGCACACGGAAGGTCCTAATGGAAGCAGCCGTCTCATCTGTGAGGTATGCATCACACGACTCCGTGATGCATGCAACTTCAAGAAGCAGGTGCTCGAGTCTGAGAAGAAATTTGTTGACATGGTTGGGAGAGGTGATTTTAAACCAAAGGCTGTGATAATATTGGAAGCGACGCCGCTGAAAACGGAGTTTCCTGATCCTCTGCCCGGACCATCGGAGGACGATTGTGAGATTGAATATTTAGATGAGGACGACTATACTGATGGTTACAGAGACGACGAGCCTCTGCAGAAGTTACAAGCGGCCGGCATCACCGTGTCGAGCCTCTCTGTTAAGGGAAAACGTGGCAAGAAACGTTCCGCGGACACCACGAAGCCCGTCAAAGCCGAGAAGAAGAAGAAGACTGAAGGGAAGAGCTCCAAGTCAAAGTCTAGCAAAGATGAAATTAAGCTGATGGAAACGCTATGGGATTCACTCGCTGTTAAAAGGAGGCACAATCTACAAATTATATTCAACTTCACGTCGATTATACCGTTCAAATGGGCCGCCAAATACATGTGCTTCTATTGTGACAAGTCGTTCAATGAAGCCGACCGTTTGGCTTTGAGGAAACATACTAAATATCACGGGGAATGTTTCCCGGACAATTATGCAATTAAACAGTTGGTCGATTCGAATAAGAGTGTCAAAGTTGACGTTTCGCAAATCACTTGCGAACTTTGCAGTACTAATTTTGAGAGGTTGGACGAGATTCTTGTCCACGTCAATACCACGCACGATTTGGAATATGTACCTAATGTCAATATTAATTTAGAGCCGTATTCGCTTAACGATTTGAAATGTCTCATGTGTTATAGAAATAATAATTCGTTCTCGCAGCTCGAGGTGCATTTGAAACAATGCCATCCAATGGAGTTCGCTATCTGCTCCACGTGCGGTCAAAGATTCAATTCCTCTAGTAATTTGGAAATACATTTTGAGAATTATCACACGCCCGGCTGTTACGTGTGCGACTCGTGCCCCCAAACTTTTTTGTCGCAAGACGGCCTCGAATACCACAAGGAGCTGCTCCACGATACTATATGCGAAATTTGCCTCCATCCATTCCCTACCGTTAAACTGAAGCAGAGACATATTCATGCCAAACACGTGACGAAGTTCAAATGCTTCGCCTGTTCGAAAACGTTCGAGACTAAAGGCTCTCTGCGACAACACACGGCTAAATGTTTCACTCTAAAAGGCACCGATATTAGGATTAAAGTTTTGGAAGGGGAGCAGGAGGATATGACGAAAGATGTGGTCAAAACGATGCGGTACAACATGTATAACGTTCTCAATATGTGCACGATAATCCCTTTCAAATGGTTCATGAATAGGTTTCGCTGTTTCTATTGTCAATTAGATTTCAACGACTCTCAGGAGCTGAGAGAGCATAGTATCACTAAACACACCAGCTGCGATTTGAAAGATTTGAAGAGGTGTAAAGGGGAACAGGGGGAGGTGAAGGTCGACACGTCGTCGCTCATTTGCAAGGAATGCTCTGCCGTTTTTGATAATTTGGATATTGTGATCGAACATCTGATTTCCAATCATAAGTTGGAGTATGACAAGTCTGCCGGCACGTCCTTCCAAGAATTCAAACTTCATCCGAAAGAGATGCTCTGTCCGTTTTGCAATGAGAAATTCTCGTTCTTCGGCAATATTCTTAAACACATAAACGAGAAACATTTCGAGAAGAATTTCGTTTGCACCTATTGCGGTTTGTTCTTTTGCAAGGAGGTCAATCTTAGAGGTCATATTAATAGTCAGCACAACGTCGGACTTCAGTGTACAATGTGTCCGGTCAAACTGCAGAATAAGAGCAAGTTGATTATCCACATGGCCAATAATCATGGTGAGAAGATTTCTAAATGCACGATGTGTTCTGAGAGTTTCACGAGTCCCTATGTCAGGGCGAAGCATATGGTTGAAAAACACAATTTAGAATACAAGTGTAAATATTGTACGAAAGTTTATCCGAAGAACTCGTTTCTGCAAAAGCATATTAAGACTGCGCATCCAGACAAGATGGACGATTATGCTGTCCCGTCGACTTCTTCCATGCTCGACGTGAAGCCTGTAAAGAAAGAGCCTAAAACTGAGGAGGACTTTGATTTTGATTTGCTGTCGGTACTCGATTGCGTCACGGAAGGCCAAGAAGTGCAGCCGGACGAAGCTCCTTACGTTAGAAAATCCAACGGAGAAATGAGTCGAAGAAAACGAAACCTTCAACTCGTATTGAATATGTCGACCGTGTTGCCTTTCAAATGGTTTTTGAGCAGCTTTCGGTGTTTCTACTGCAAACGCAACTTCTCCGATCCAGAATTATTAAAGGAGCACACTCTAAAAACACATTTTGAATATTTTGAGCTGAAGAAAGCTTTGAAACGTTACAAAGGGGAGAATGTTACGGTCAAAGTCGACGTTTCGTCACTTTCTTGTCGCATCTGTTCGTCACACTTTGACGATATTAACGTTTTGATTGACCATTTGATTATGTCGCACGATGCCGATTACGACAAGTCACTGACAGATTGCTTCATGCCGTTCCGTCTCATGGAAGACAACATGATATGCTTAGTATGCGGTGAAAAATTCACCTTTTTCGGTCACCTCCTGATCCACTACAACGATCAGCATTTATCAAAGGACCACATTTGCAGTTATTGCGGTTTAACCTTTTCCAAATTTGTCAACCTGCGTGCGCACATCTCTAACCGTCACAGTGAGGATACGCACACTTGCGCCGAGTGCAATTCCGAATTCCCATCGAAATCACGTCTTTTGACCCACATGGCTCGTAATCACGGCACTAAGGTCTCCAAATGTAGGCACTGCGATGAGAGTTTCACTACGCCATATTTGAGGTCTAAGCATATGGTCGAGAAGCACAACTTGGAACACAGATGTCCTCATTGTCACAAGGTGTTCCCGAAAAATTCCACCATGAAGACGCACATCCGTCGCGTTCATTTGAGAGAGAggaatgtacagtgcgacgtttgcagcgaaaagtttttcgataacaccctcttgcggctacatatggtcaaacatgagggggttaggaattttaagtgtgactattgtggcaaaacgttcctttggatgaagaatcttagggctcatgtgaaggcgcatactaaggatTTGGTCGCGCACAATATGTCCATGGCCATGTGTCCAGAAGACGAGGATAATAAGAAAACAGAGCAAGCACGTAAGATGTTAGCGAAACGCAAAAACGTTGAATACGTGCTCCAATACGCTAACGTGACACCTTTTGTTTGGTATAAGAATCGATACAGGTGCTTCTATTGCCTTGAACCAATGAAAAACCCGGATTTGTTAAAGGAGCATACGGTCAAAGTCCACCAATTCGCTAATTTAGAATTAGCTGTTCACGATCGTCTAAAAAACAATAGGAATCGTGATGCCGCTGTCAAAATCGACGTGTCAGATTTAGCTTGCAATCTGTGCTCGAAAAGTTTGCACAATCTAGAGCAGCTGATTAACCATTTGATCATAACACACGACGCCGAGTACGATATGACCGTACAGAATTGCCTTCTACCGTTTAAATTGCACAAAAACAGCCCGATTTGCGCGACCTGCGATCAGAGATTCGTTTCGTTCGAGTATTTGCTGCGTCACGCGAATAAGTTCCATCTGCTCCATAATTATAAGTGCGATATTTGCGGCACGTCGTTTCAGGGGGAGAATCATTTGCAGATGCACAATAGGTACTATCATAAGGAAGGTGGATACAATTGTAGCGTTTGCAACGTCAAATTGTCAACGTTATCCAAGAAAGCTTTACACGAGAAGAACGTGCATCTGGTCAACTTGCAAACgtgcccccattgtccggagacgttcaagagcccttaccttaaaaagctgcatatggctaacgttcacagcgtcgaggaattgaagatcaagtgtccgttttgttctaaggtctacccgcaagagagcataatgtcgaggcatatgcgtagggtgcatctgcgcgagaagaacgtgtcgtgcgagaaatgcggcgatcagttcttcggcgcttacgatctcaaattgcacatgttgaaacataacggcgaaaagaagtttatttgtagtatttgtggaaagaaattcgctaAAATTGGCAATTTGAACGCTCATATGATCGTTCATACCGGTACGAAGAGGTACATCTGCGAGATTTGTCTGAAGGCCTTCGCGCATCATACCAACTTAAAGATGCACATTAAGACGAGACACCTCGAGGAGGTTGTTAGTGAAGATAATAACGTCACTGATGACGGAATTATTACTATGGAGTACATAACGCAGGAGTACATCACGCAAGATCTGGAGGATTGTGCTGAAATCACTTAA
Protein Sequence: MDFDEIVVKDSPGLCRCCLSEGCYKDLSTEYTWMGENEIYADMLFECFDISITQHTEGPNGSSRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGDFKPKAVIILEATPLKTEFPDPLPGPSEDDCEIEYLDEDDYTDGYRDDEPLQKLQAAGITVSSLSVKGKRGKKRSADTTKPVKAEKKKKTEGKSSKSKSSKDEIKLMETLWDSLAVKRRHNLQIIFNFTSIIPFKWAAKYMCFYCDKSFNEADRLALRKHTKYHGECFPDNYAIKQLVDSNKSVKVDVSQITCELCSTNFERLDEILVHVNTTHDLEYVPNVNINLEPYSLNDLKCLMCYRNNNSFSQLEVHLKQCHPMEFAICSTCGQRFNSSSNLEIHFENYHTPGCYVCDSCPQTFLSQDGLEYHKELLHDTICEICLHPFPTVKLKQRHIHAKHVTKFKCFACSKTFETKGSLRQHTAKCFTLKGTDIRIKVLEGEQEDMTKDVVKTMRYNMYNVLNMCTIIPFKWFMNRFRCFYCQLDFNDSQELREHSITKHTSCDLKDLKRCKGEQGEVKVDTSSLICKECSAVFDNLDIVIEHLISNHKLEYDKSAGTSFQEFKLHPKEMLCPFCNEKFSFFGNILKHINEKHFEKNFVCTYCGLFFCKEVNLRGHINSQHNVGLQCTMCPVKLQNKSKLIIHMANNHGEKISKCTMCSESFTSPYVRAKHMVEKHNLEYKCKYCTKVYPKNSFLQKHIKTAHPDKMDDYAVPSTSSMLDVKPVKKEPKTEEDFDFDLLSVLDCVTEGQEVQPDEAPYVRKSNGEMSRRKRNLQLVLNMSTVLPFKWFLSSFRCFYCKRNFSDPELLKEHTLKTHFEYFELKKALKRYKGENVTVKVDVSSLSCRICSSHFDDINVLIDHLIMSHDADYDKSLTDCFMPFRLMEDNMICLVCGEKFTFFGHLLIHYNDQHLSKDHICSYCGLTFSKFVNLRAHISNRHSEDTHTCAECNSEFPSKSRLLTHMARNHGTKVSKCRHCDESFTTPYLRSKHMVEKHNLEHRCPHCHKVFPKNSTMKTHIRRVHLRERNVQCDVCSEKFFDNTLLRLHMVKHEGVRNFKCDYCGKTFLWMKNLRAHVKAHTKDLVAHNMSMAMCPEDEDNKKTEQARKMLAKRKNVEYVLQYANVTPFVWYKNRYRCFYCLEPMKNPDLLKEHTVKVHQFANLELAVHDRLKNNRNRDAAVKIDVSDLACNLCSKSLHNLEQLINHLIITHDAEYDMTVQNCLLPFKLHKNSPICATCDQRFVSFEYLLRHANKFHLLHNYKCDICGTSFQGENHLQMHNRYYHKEGGYNCSVCNVKLSTLSKKALHEKNVHLVNLQTCPHCPETFKSPYLKKLHMANVHSVEELKIKCPFCSKVYPQESIMSRHMRRVHLREKNVSCEKCGDQFFGAYDLKLHMLKHNGEKKFICSICGKKFAKIGNLNAHMIVHTGTKRYICEICLKAFAHHTNLKMHIKTRHLEEVVSEDNNVTDDGIITMEYITQEYITQDLEDCAEIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -