Tpel004814.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tinea pellionella
Gene Symbol
-
Assembly
GCA_948150575.1
Location
OX411272.1:1166145-1175186[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 2.8 1.5e+02 3.1 0.7 1 23 50 72 50 72 0.95
2 36 0.1 5.6 7.6 1.5 2 23 97 119 96 119 0.93
3 36 0.077 4.3 8.0 0.1 2 23 140 161 139 161 0.96
4 36 0.038 2.1 9.0 0.9 3 21 167 185 166 187 0.94
5 36 0.0014 0.079 13.5 0.4 1 23 192 215 192 215 0.91
6 36 0.0013 0.071 13.6 3.9 1 23 221 244 221 244 0.97
7 36 0.032 1.8 9.2 0.3 2 23 251 273 250 273 0.95
8 36 6.9e-06 0.00038 20.7 1.3 1 23 279 301 279 301 0.98
9 36 0.00023 0.013 16.0 2.7 1 23 360 382 360 382 0.95
10 36 1.2 64 4.3 1.9 2 23 402 424 402 424 0.93
11 36 0.00071 0.039 14.4 1.8 1 23 445 467 445 467 0.98
12 36 0.021 1.2 9.7 2.3 1 23 471 493 471 493 0.96
13 36 0.05 2.8 8.6 1.3 1 23 498 521 498 521 0.93
14 36 0.0021 0.12 12.9 1.6 1 23 527 550 527 550 0.98
15 36 0.011 0.61 10.6 4.0 1 23 557 580 557 580 0.97
16 36 4.1e-06 0.00023 21.5 2.8 1 23 586 608 586 608 0.98
17 36 8.7e-05 0.0048 17.3 3.1 1 23 615 637 615 637 0.98
18 36 3.2e-06 0.00018 21.8 0.9 1 23 643 665 643 665 0.98
19 36 0.031 1.7 9.2 0.1 2 20 713 731 712 735 0.91
20 36 0.0017 0.093 13.2 0.4 2 23 760 781 759 781 0.97
21 36 0.004 0.22 12.0 8.6 1 23 801 823 801 823 0.95
22 36 0.0013 0.07 13.6 0.1 1 23 827 849 827 849 0.98
23 36 0.87 48 4.7 0.2 3 23 856 877 854 877 0.90
24 36 0.0024 0.13 12.7 0.9 2 23 885 907 884 907 0.91
25 36 0.025 1.4 9.5 5.8 1 23 934 956 934 956 0.98
26 36 0.013 0.7 10.5 1.1 1 23 961 983 961 983 0.98
27 36 0.12 6.9 7.3 0.2 2 19 1034 1051 1033 1052 0.92
28 36 0.39 22 5.8 0.2 2 23 1081 1102 1080 1102 0.94
29 36 0.0015 0.086 13.3 2.6 1 17 1122 1138 1122 1139 0.94
30 36 0.04 2.2 8.9 0.1 3 19 1229 1245 1228 1246 0.95
31 36 0.00095 0.053 14.0 7.8 1 23 1316 1338 1316 1338 0.97
32 36 0.0021 0.12 12.9 2.9 1 23 1342 1365 1342 1365 0.97
33 36 0.0077 0.43 11.1 3.6 2 23 1400 1422 1399 1422 0.93
34 36 0.00074 0.041 14.3 3.1 1 23 1460 1482 1460 1482 0.97
35 36 2.9e-06 0.00016 21.9 2.3 2 23 1488 1509 1487 1509 0.97
36 36 1.9e-08 1.1e-06 28.8 0.8 1 23 1514 1536 1514 1536 0.98

Sequence Information

Coding Sequence
ATGCCCAGCGAAATACACGAGAATTTTGTTTTAGGATCTCGGCAATCGGATCAGACAATGAAGCTGTCCAGGATCAAGGAGCGAGAGAACGCTGTTATGATCTTACGCAATTGTAACGCGACCGCTTTTCGATGGCTGAGTGACAAATTTGTCTGTCCTTTCTGTGCGTTACAATTTGGGACGTTTTCTGTCTATAAAGATCATTTTTCTTCCCATACCGATGACGTTAAACGTATTTGGCGTACTAAGGAAGCTTCCGAGTACGTCAAAGTCGATATTAGCGATTTGTGTTGTCGAATTTGCGAGGAAGTGTTTCCTAATTTAGAAGAGTTCTCTTTGCATCTGCACGTGAAGCACGGTTTAGGCGATCCCAACTTCGGCGCTTGTCTGCTACCGTTCAAAGTGACTGATGTTTTGAGATGCGTCATGTGCGACGAAAACCCATCGACCTTGATGAATCTGATCCGCCACATGAGTGTACACTTTCAGAACAACATCTGCGAGTCGTGCGGCCGTGGTTTTATCGATTTGAACCAGCTGGCGTCTCACCAGAAGTGTCACGACACGGGCAGTTTCGCTTGCGGCTCTTGCCCGAAAGTTTTTAAGAATAAAGATTTGTTGTATTCGCACAATAAAGCGTTGCATAATGACAGATGTAGACACCGTTGTCCGCATTGCGGCGAGAGGTTCACGACTTACGTGGCTCGAGCGAAACATTTAAAAAAGACTCACAATATCTTCAGTAAACTTAAATGTCCGTACTGCCCTTTAGTTTTTGAAATCCAGAAGTATAGGCGTTCCCATATAACGAAGGCACACATTAGAGATAAAAAACATACGTGTAACCAATGCGATTTGGCGTTCATCACTTCGTCtgaactgaagtctcatatgataaggcatacgggcgagaaatgcttctcttgtgacgtttGGCACCACGTGGCCGATGAAGACGGCTCACTCCACATAAACGCAAATTGGGCATTGTCAGAGATTAAAAGAAACGCCCGAACGGATTTTGTGACAAGTCTATTAAAATATTCCACCGCTTACCCGTTCAGATGGAGACGTAGTTATTTGTGCTTCTTTTGCAATAAGAACTTCCGCGATCCGAAAGATTTGCGACAACACACTAAATCGCACGAAATTGTTAAAAAAATAATTTCTAACGGACTTATTAATGTCGATTTTTTTGCGGCCAAATGTAAAATCTGTGACGCCGATGTTAATAACTTTCATTTGTTTAAAAATCATTTGTTCAACGAACACGGAAAAGAATTAGCCGTGACAATAGACGACGGCATATTCCCGTTTAAGTTGACAAAGAAATTCCGATGCGAAATTTGCGATCAAAACTTCGAATATTTCCTCACGTTATTCAAACATATGAATTCGCACTACACTAATTTCATTTGTGAGTTTTGCGGCAAAGGATTCGCTACTAGACACAGGAAATCGAATCATGTGCGGTTACACATAAAGGGTCAATTCGTTTGCAAAATCTGCAACGAAAGCTTTCAAAGTTACACGGAGAGGGTCACGCATACGATTAAGAAACATTCAAATACGAACAGGTACAAGTGTCCAATTTGCAATGAATATTTTGCGTCTTATTTCTCTAGAAATAAGCATCTGAGTACGACGCATAATGAGAAGAGTGCTAAATACAGCTGTCATTTGTGCGAGAAGCAGTTCGGGTCCTCGAGTCATAGGTCGGCtcatgtgaagcgtgagcatctgagagaaatgaacttcatgtgcacagtatgcggtaaaaagttctgtgagaagtcggagttgaaggagcacatgataaaacacgacggcggctccaaagtttacaattgtgacgtgtgtcacaagtcatacgcgagggcgaaaaccttgagggaacataAAAAAACTCATATGAAAGACTCTAACTTCAAATGTGCGGTCTGCGAACGTGTTTTCTTTCAGAATAGTACTTTAAAACGGCATATGCTCGTACACGCGGTTTGCGAGGACAAAGGGGAGGGGGCGGACCTCGACCGCAATGAGCTACGAGCGCATTGGAGTAAAATGAAAAGTAACATTCTAACCGTCTTGGAGTATACGTCCGCCTGCCCGTTTCGTTGGCAACAGAATAGCTTAACGTGTTTCTATTGCGGCACGAAATTCTCGAACGTCGCAGCTCTTTATGAACACACCCCGATCGAACACGTCGATGTGCACGAGGCCTTCGCTAAGACACGATGGGCTAGGACGCACGTTAAAGTCGAAATATCGTACCTCAAATGTAACATTTGCTCGCTCAAATTCGACGATTTAGAAGCTATTAAAAAGCATCTCCAAACGCACGGTAAAACGATATATGCGGCGTACGATTTTTTACCATACAAATTGACTAAGAAACTGTTCACGTGCCACATTTGCGATAAAACTTTCAACAGATTCGTTCATCTGTCGCATCATTTCAGCCAGCATTATAGGAATTACGTTTGCGACATTTGCGGCGATCCGTTCGCTGAGAAGAGTTACTTCAAAGCGCATGTTAAACTACACGCTGGAGCGACGTCGAATTGCAAACGTTGTAAGATAACGTTCCCTTCTATATCTGCTAAAAGACTTCACATAGCTGCGGTTCATGTTAAAGACGGTCTGTTAGTCCCTTGCCCTTATTGTCCGGAACGTTTTAAGCATCCGTATCAGCGTTTCCACCACTTGGCTGAAGTTCACAATATTAAGAATGAAAATTGCAAATGTCCCTCTTGTAGAGGTGTCAAAAGACCGGCTGATGATGAACAGAATAAGCCGTTTCAGTGTGATCAATGTTTTAAAAGATATGCTAAGAAACAACATTTGGATAAGCATAAGAAATTGCATTTAGGCATaaagtatacttgcgaggtatgctcgaagttgtacgcgacgaggaagtcattgaattttcatttgaggattcataataacgacaaaagatttgtgtgtagggaatgtgGTTTGGTGTCGGATCAAAAAGAGTCCCGCATGAATTGGAGTAGAGTGCAACATAACGTACTAACGGTTTTGGAAAATACGACAGCCTGCCCTTTTCGATGGCGTTCAAATAACCTTATGTGCTTTTATTGCAATGAGAAATTCAGTGATGTCGGTTCTCTATATGAGCATACTCCATTAGTTCATAAAAATATAGTCAAATCGCTCAAAAGTGCAGAATGGAAAAGGAAACACGTAAAGTTGGAAATATCGCAACTTTCTTGTCTGATTTGTGCACTAAAATTCGAACAGTTGGAGGAAGTTAAGAAACATTTGACGGAACATGGAAAAATTATTCATAAAATCCACGACTTCCTACCATACAAACTTAGTAAACAGTTATTCACGTGCCATTATTGCGATAAAGTGTTTAATCGTTTTTACCATCTAACCACTACAATCAGCATTTTAGGAATTACGTTTGCGACATTTGCGGTCAACCTTTCGCGGAACGCGGTCGTTTCAGACAGCATATCAAGCTGCACGCGGGAGGTCCGTACGTGTGCGGGCGTTGCGGTGAATCCTTCACCTCACGTTCTTCTAGGTTTGGCGTCCGGCCGCAAAGAGCAACACCTGCATTGGAATAAAGTGAAACATAATATATTAACGCTTTTGGAAAACACGACAGCGTGCCCTTTTCGATGGCGTTCGAATAAGCTCTTGTGTTTTTATTGCGATGAGACGTTCACTAACCTCGGAGCTCTCTACGAGCATACTCCATTGTATCACGAGGATATAGTTAAATCATTTTATAACGCGAAATGGTATAGGCAACATGTTAAGATCGAAATTACAAAACTCTCTTGTCTAATTTGTGGACATAAGCACGAGCATTTGGAGGATGTTAAGAAAGATCTGATCGCACATGGCAAAATAATTCACGAGGTCTTGGATTTCCTGCCTTACAAACTTAGCACCCAATTGTACACGTGCCATTATTGCGATAAAGTCTTCGGTCACCTTCACCAATTGACTCAACACTTCAATCAGCATTTCAAAAATTATATCTGTCACTATTGCGACGAACCTTTCGCGGAATATTATTTTTATAGGAAGCACATTAATAAGAAACACGATGTCGTACCGTCCGCGTGCAGGCCTTGCGGTATAACCTTCCCCTCCGCTGTCGCTAAACGAAAGCATTTCGTCGCCGTCCATTCGGTTCGGAAGGCCGTATCCTGCCCGCACTGCAATGAGACCTTCACACATTCAATACAAAGGTTTCATCATATGGCTGAGGTCCACAATGCTAAAAATAATCAATGCAAATGTGCATCCTGTAGGCGTGACCCGAGAGAGGAGAAACCGTCGAAAGACAAAGAAAAAGTTGAGGAAGCCGACGATGTCCCGAAATCATTCCGTTGCGATGAATGCGATAAGACGTTTACAAAGATGCTTTTTTTGAATCGACACAAGAAACTGCATCTCGGTATTAAACTGGAATGTACTATTTGTCACAAATCATATACGAATAAAAATGGTTTGAGAATCCATATGAGGTCGCATAGAGATAGTCCGTTCGTTTGTAACGAGTGCGGACGGACGTTTGTGCAAAATCGTAATCTGAAAAATCATATGCGAGTGCATTTTGCGCACGAGACGATTCAACGGGGGAATATTAGTACCAAACATTTTCAGCTGCGTAATAAGTACGACCCCTCCGTAGAATAG
Protein Sequence
MPSEIHENFVLGSRQSDQTMKLSRIKERENAVMILRNCNATAFRWLSDKFVCPFCALQFGTFSVYKDHFSSHTDDVKRIWRTKEASEYVKVDISDLCCRICEEVFPNLEEFSLHLHVKHGLGDPNFGACLLPFKVTDVLRCVMCDENPSTLMNLIRHMSVHFQNNICESCGRGFIDLNQLASHQKCHDTGSFACGSCPKVFKNKDLLYSHNKALHNDRCRHRCPHCGERFTTYVARAKHLKKTHNIFSKLKCPYCPLVFEIQKYRRSHITKAHIRDKKHTCNQCDLAFITSSELKSHMIRHTGEKCFSCDVWHHVADEDGSLHINANWALSEIKRNARTDFVTSLLKYSTAYPFRWRRSYLCFFCNKNFRDPKDLRQHTKSHEIVKKIISNGLINVDFFAAKCKICDADVNNFHLFKNHLFNEHGKELAVTIDDGIFPFKLTKKFRCEICDQNFEYFLTLFKHMNSHYTNFICEFCGKGFATRHRKSNHVRLHIKGQFVCKICNESFQSYTERVTHTIKKHSNTNRYKCPICNEYFASYFSRNKHLSTTHNEKSAKYSCHLCEKQFGSSSHRSAHVKREHLREMNFMCTVCGKKFCEKSELKEHMIKHDGGSKVYNCDVCHKSYARAKTLREHKKTHMKDSNFKCAVCERVFFQNSTLKRHMLVHAVCEDKGEGADLDRNELRAHWSKMKSNILTVLEYTSACPFRWQQNSLTCFYCGTKFSNVAALYEHTPIEHVDVHEAFAKTRWARTHVKVEISYLKCNICSLKFDDLEAIKKHLQTHGKTIYAAYDFLPYKLTKKLFTCHICDKTFNRFVHLSHHFSQHYRNYVCDICGDPFAEKSYFKAHVKLHAGATSNCKRCKITFPSISAKRLHIAAVHVKDGLLVPCPYCPERFKHPYQRFHHLAEVHNIKNENCKCPSCRGVKRPADDEQNKPFQCDQCFKRYAKKQHLDKHKKLHLGIKYTCEVCSKLYATRKSLNFHLRIHNNDKRFVCRECGLVSDQKESRMNWSRVQHNVLTVLENTTACPFRWRSNNLMCFYCNEKFSDVGSLYEHTPLVHKNIVKSLKSAEWKRKHVKLEISQLSCLICALKFEQLEEVKKHLTEHGKIIHKIHDFLPYKLSKQLFTCHYCDKVFNRFYHLTTTISILGITFATFAVNLSRNAVVSDSISSCTREVRTCAGVAVNPSPHVLLGLASGRKEQHLHWNKVKHNILTLLENTTACPFRWRSNKLLCFYCDETFTNLGALYEHTPLYHEDIVKSFYNAKWYRQHVKIEITKLSCLICGHKHEHLEDVKKDLIAHGKIIHEVLDFLPYKLSTQLYTCHYCDKVFGHLHQLTQHFNQHFKNYICHYCDEPFAEYYFYRKHINKKHDVVPSACRPCGITFPSAVAKRKHFVAVHSVRKAVSCPHCNETFTHSIQRFHHMAEVHNAKNNQCKCASCRRDPREEKPSKDKEKVEEADDVPKSFRCDECDKTFTKMLFLNRHKKLHLGIKLECTICHKSYTNKNGLRIHMRSHRDSPFVCNECGRTFVQNRNLKNHMRVHFAHETIQRGNISTKHFQLRNKYDPSVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-