Tpel004825.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- -
- Assembly
- GCA_948150575.1
- Location
- OX411272.1:1245550-1252500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-07 0.00015 21.4 0.0 2 43 277 318 276 320 0.92 2 2 0.0057 4.2 7.1 0.0 14 38 348 372 339 377 0.84
Sequence Information
- Coding Sequence
- CCCAAAAATGATGCTTCTAAAGAACCGCCGGCATTCGAAGAACACCTGTTACCTGATGAAGAAATAAAGCAATCTGATGATGATGCAGAGAGTGTACACGATGAAGTGGAAACTGGAAAGTGGAAAATGGAAACATTAGAAACGTCTGATGAAGGTAACAGATTGCTCGAGTTTGAAGAGCCGCATATGGGCAACAGTCACCTCCACTATGCTGGCTTGAGGAGACGAATGTATAGTGTCCAAAGTGTTAGAGCACACTCCTCTTGTTGTATCTGGTTACTACCCAACTGGACACTGTTTTTATCTAagGTGTGCAGATGTTGTCTCGGCGGGGAAGGGCTCGAGGATCTATGGAGTGTACATATTTATGGAAATATGCCTGAAGTATATGGAAGTTTATTAAAACAGTGCTTTGGGATTGAGTTATCACAAATGAAAAATGACAAAGTATGTTCGGAATGCATAAGGAGTCTACACGAGGCGAACGCTTTTAAGAATGTCGTTCTGAACGTTCAGCAACAGTTGACGGGCGCGACGGTTGAGGATGTGAAGGAAAATAATAGTTGTGTTGTCGAATTTAATAATAAGTTTTTAGATAAGAAATCAGATGAGGATTATATTGACGAAAATGAATATCCGACTGAATATTTGGAATCTGATCTGGAACTGGGTGGCGAGGAGGTCGTGGCTGATAATTCTAAACCTGTAGAAGTGTTCAGCGGAACCAATATACAGACTAAACCGCAATCGCCACCTAAAATGCCACAGCAGAAACGCAAGAGTAATTTTAAAATAGTGAAAGTTGTCAAGCGCAGAGTGTTGCCCAGTAGGGAGACGCTGATACGGGCGGTGCGAGCTGTGAAGGAAGGCAAAATGACCCTCAGCGCCGCGAAGAAGTTATACGACATCAACGGTTATTGTTTGAAGAAAATCGTAGAGGGTAATGTTGATTTGGAGAAAGTTGATCTGTCAATTTTGACTGCTCGAGGTGATAAGAAAGACTCCATCGAGATGTTGAGGATGTGTACGGATTTTGTTAAACAGGGTAAATTAACTAAAGTGGAAGCCGCTGCGTTATTTAGTATACCACTAACCACGATCGATTATAGATTATCTAAAGGATTTCCTGAAGATAGACCTGATCAATTAATAGATACGAAAAGAGTTGATAGAAATGGAGTCACGATAGTCGAAGTAGATAATAAAGTATCAAGGGATCCGGAGAAATTCACGCGCGCCGATCGTCTCCGTTTAGAGCAGGACGTGAAAATGATCCTCGCGTGTACGAACGTGACGCCGTATTTGGTTTTGCGCGAGAAATTCGTCTGTGGATATTGTAATGAAAGCTTTTATGTGCCAGATGAATTAAGAAATCATGTGTTGACGCATGGCAGTGTCCGTAATGATGTCGAGCTCCTCTTGCGTCCTGCAGAAGTGAAGGAGATCATGCACTTGGATATACAAGACTTGAAATGTGGCGTGTGCGATTCATGTATGAAATGGGAGGATATGTATAGTCATTTGAAGGGGCACGGGGTTCTTATAGCGGAATTGTCTAAAACTAGAATTGTTCCCTTCGAGTTGATACCTTACAACTATAAATGCGTATTTTGTGATGTGTGTGAAAGTAGATATATGCGATTGGAGGTGCATATGTCCGTGCATTTTGATAATTATATATGCAGCGATTGCGGCCATAGTTTTATGATTTATTCCAAGTTGAAGACGCACGAATATCAAGAGAAACAAAAGAAATTAGATTTTAAATGCGAAATGTGCGAGGAGATGATCGTCGGCCGAACAAACTTTGAGAAACACATGGCTACAGCTCACAGTTCACCGATGACATTTCCGTGCAAGCATTGCAAGGAAAAATTCAGAGATCAGTACCGGCGGCATCTGCACATGGTCGAGAAGCACAAAAGTGAAGTAAAACCTATTAAATGCGAGGAATGCGATAAGGAGTTTCTGTGGAAGGGGTTCTATTTACAACATTATAGGAAAGTGCATTTAAATGAGCAAAAATATGAGTGCGGCAAATGCAAGAAGAGATTCTTTGCGACGCATTCTTACAAGAAACATTTGGCAACACATAAACGTAGAGACTACCAGTGTTACTAG
- Protein Sequence
- PKNDASKEPPAFEEHLLPDEEIKQSDDDAESVHDEVETGKWKMETLETSDEGNRLLEFEEPHMGNSHLHYAGLRRRMYSVQSVRAHSSCCIWLLPNWTLFLSKVCRCCLGGEGLEDLWSVHIYGNMPEVYGSLLKQCFGIELSQMKNDKVCSECIRSLHEANAFKNVVLNVQQQLTGATVEDVKENNSCVVEFNNKFLDKKSDEDYIDENEYPTEYLESDLELGGEEVVADNSKPVEVFSGTNIQTKPQSPPKMPQQKRKSNFKIVKVVKRRVLPSRETLIRAVRAVKEGKMTLSAAKKLYDINGYCLKKIVEGNVDLEKVDLSILTARGDKKDSIEMLRMCTDFVKQGKLTKVEAAALFSIPLTTIDYRLSKGFPEDRPDQLIDTKRVDRNGVTIVEVDNKVSRDPEKFTRADRLRLEQDVKMILACTNVTPYLVLREKFVCGYCNESFYVPDELRNHVLTHGSVRNDVELLLRPAEVKEIMHLDIQDLKCGVCDSCMKWEDMYSHLKGHGVLIAELSKTRIVPFELIPYNYKCVFCDVCESRYMRLEVHMSVHFDNYICSDCGHSFMIYSKLKTHEYQEKQKKLDFKCEMCEEMIVGRTNFEKHMATAHSSPMTFPCKHCKEKFRDQYRRHLHMVEKHKSEVKPIKCEECDKEFLWKGFYLQHYRKVHLNEQKYECGKCKKRFFATHSYKKHLATHKRRDYQCY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451953;
- 90% Identity
- iTF_01451953;
- 80% Identity
- iTF_01451953;