Tpel010049.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- lolal
- Assembly
- GCA_948150575.1
- Location
- OX411244.1:11030654-11045035[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.9e-05 0.044 13.5 0.0 1 38 417 453 417 458 0.89 2 3 2.6e-05 0.019 14.6 0.0 7 35 670 697 666 702 0.88 3 3 1.3 9.4e+02 -0.4 0.0 11 34 870 892 864 901 0.71
Sequence Information
- Coding Sequence
- ATGCGGCACGGTTTTGCCAAGTATTTCCGGGACGCGTACTTGGCGGTATCGCGCCGCTATAGTGCGGCTGTATTCCCACGCCTGCTGACAACagaacattttgctgatgtgactcttgcctgcgaaaatcggcaaataaaatgtcacaaattggtgctgagcgcatgttccgcttacttcgagagacttctcgtacagaatccatgcaaacatcccattgtttttatgaaggatatgagGTTTAGTGAGATGcatgcgttagtcgacttcatgtacaagggtgaagtaaatgtaacacaagatgaacttccaagcctccttaaatcagctgaagccctacaaaTACGAGGTTTGTGTTCAGCTGAAACTGCAAATTTGGCTTCAGACTTGTTCAATCCAAAGGCAGAAACACGTGACTATAATTTGGCTAGTGATGCTCTGTTAGCACAAGCGCATTATAACTGTTCCCAGAATAATTCCATTCCACCAAAAACGTACTCTAACGCTGCTGCAAGCACTAATGGATCAACAAAGAAACGCAAATCCGAGGAGCTTAATCGCCCTTCCACGTCCGCTGATGTCAAAGAAGAAACAGTCGAAGAGGATGGTCTTTATTATGGTGACATCGACCAGGATCATGATTTTAATGAGGATGAAGATACCGGAAAACCAGGAAATAGTCTTAATCAACCATCAGCGCTGCCATACATCCGCGTGAAGCCGGAGAGCGAACTGTTCAATAACCAACTGAGGAGTGGCAATAACTATAATAAAAAAATACCGAACATAAACCCTTTGAACTATAATTACAACAAATACAGCTGCAATTATGATGAGCCGAAGATGCCCGAAAAGAGTGTTGTTAACTCAGAGAATGATTATTACAAGCTGTGGTTGGAGCAAAACGGCGAATTGGAGGTATCTTTGCTTCGAGCCAGTGACAAGGTACGAAAACCAAAAGTTTACGCAAAAAACGAAGTGGAATTAATACCAAAGATAAATACCAAATCTATTGAGAAAACTCTGCAATCTGATGGCAGTACTGCTGATGTCAATGCAAAGATGCCACAAATGCGGCGCCGCGGTAGACCTCCTATTTTTAAAGATAAACCCGCAGAAATTACCGAAACTGTTTTAAAGTCAGATTTAGATCAGTTTTTGGAAGGAAAGGAAGTGTCCTCTTCCGGTCTGTCCAGAAAGGACTTGGAAAGAGTAATGATGGGCAAGTACAATCCTAATCGGCGATATTCTAATGAAGCGATGTGGGCCGCACTAATGGATGTCAAAAGAGGTGGCAGCATATACAGAGCTGCCCAAACTCACAAAGTGCCAAGAAAATCTCTCAGAAATTGGATGAAGCGTTGTCAAATAAAATCATCTTTCCCGATGCCGCAGCAACTTAAACAATTTGTCGAGAATAGCAAGAAGCAAAAGGAATATCGTAATTTCGATGGGCAACAATCTACTTACGACACTCTCGCGACCTACGAAGAGGAGGAATTCGGGAAACACTTTCTGATGTCTAATATAGCTTCGAGTGAAGATGAGATTCCTGTTAAAGTGAATGATAATGAGAAACAAGATGAAGCTAAGACATCACGAGACGATCCAATAAACATGTCCGTTGTTCGCTTCGCAAGTACTATCGGCAAAGAAAGCTTAGATGTCCAAGCATCCGAGAATGCGTGTGTTGAACAGCACAAGCCTCAAGGTGTAGCAGCTAACCTTTTGCTGATTGTACAAATACCAAGCATATGCAAGTTCTCCGAAAAAGTAAATTTAAACTGTAACAATATACTACTTGGCCAAATAAGTGCAAGGGACCTCGTGAGGACCTCCACGGAGATTGTTACCCGTCACTTTATCGATTTACCTGACCATGGGATACCTTTGAACATCCACGCGCGGCCACGGATCGTTGGTAGGAGACCGAACGCTATCGTTAACATCGAGACCGACGTCTTCCAGGAAAAATCATACAAACAGTATTCGTCACAGCATTTGAGGGATGCCCTTATTGCTGTCAAAAAAGGTTATAGTGTTTATGCAGCTTCTAACAAGTATGGCGTGCCGAGAAAGACTTTGAGAAATTGGATGGAGAAATACGATATTAAGAGTCAATTCTCAAAGGGACGCCGCGGGGCGAAAACTAATCAGATTTTGGACCCGTTAGAGTTGATGGATTTCGCAATAGCAAATGTTGAATGTCAGTATGAAAGCCCATCGGATACGGAATGCGATACAGCGTCGGATAATACAGGAGTCAGTGTTGGCGTTTCAGCTAGACTTGGTGATCATACATATGACGGTGAACCGCCAGCTTTTATCATTAAACAAATTAATAGGGGTCCATCGCCTGCTGCACATATCGACCAAGGTTGTCAGACGAATCAGTCGTTCGTGGATATTCCCCCACAGTCCATTCACACAGACAATTATTCACCGCCTAACCTCAGCGTTATACACGTTGGAGAAGCAACTCGACATATCGATCCGTTACCTAATTTATCGCACCAAATGCAACACACTAGTCTCTCACACAATATGGAATACGGGAATAATAAACGTATACGACGAAGTGAGGTTGTATTAAAGCAGGCCGCTGATTGTGTCAGTCGAGGGCACACCTTTCAGACTGTTTCAGAACAATTTAATATACCTATATCGACTATTCGGTTCTTTATGGCAAGGAAAGGTATATTACCGCGTCGACGTCGAGGCAGAAGTACGCATGTAACAACGTCCTGCAGCAGTCCAGACCTAGAACCACCTTTTCATATGCAACATTTTAAATTACCAAATATGGTAGCACTTAAGAGTGACGGTGACGACGATAGCCCCGAAAGAAAACCGTCGTCTAGGTAA
- Protein Sequence
- MRHGFAKYFRDAYLAVSRRYSAAVFPRLLTTEHFADVTLACENRQIKCHKLVLSACSAYFERLLVQNPCKHPIVFMKDMRFSEMHALVDFMYKGEVNVTQDELPSLLKSAEALQIRGLCSAETANLASDLFNPKAETRDYNLASDALLAQAHYNCSQNNSIPPKTYSNAAASTNGSTKKRKSEELNRPSTSADVKEETVEEDGLYYGDIDQDHDFNEDEDTGKPGNSLNQPSALPYIRVKPESELFNNQLRSGNNYNKKIPNINPLNYNYNKYSCNYDEPKMPEKSVVNSENDYYKLWLEQNGELEVSLLRASDKVRKPKVYAKNEVELIPKINTKSIEKTLQSDGSTADVNAKMPQMRRRGRPPIFKDKPAEITETVLKSDLDQFLEGKEVSSSGLSRKDLERVMMGKYNPNRRYSNEAMWAALMDVKRGGSIYRAAQTHKVPRKSLRNWMKRCQIKSSFPMPQQLKQFVENSKKQKEYRNFDGQQSTYDTLATYEEEEFGKHFLMSNIASSEDEIPVKVNDNEKQDEAKTSRDDPINMSVVRFASTIGKESLDVQASENACVEQHKPQGVAANLLLIVQIPSICKFSEKVNLNCNNILLGQISARDLVRTSTEIVTRHFIDLPDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGAKTNQILDPLELMDFAIANVECQYESPSDTECDTASDNTGVSVGVSARLGDHTYDGEPPAFIIKQINRGPSPAAHIDQGCQTNQSFVDIPPQSIHTDNYSPPNLSVIHVGEATRHIDPLPNLSHQMQHTSLSHNMEYGNNKRIRRSEVVLKQAADCVSRGHTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRSTHVTTSCSSPDLEPPFHMQHFKLPNMVALKSDGDDDSPERKPSSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451638;
- 90% Identity
- iTF_01451638;
- 80% Identity
- iTF_01451638;