Tpel001975.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- lolal
- Assembly
- GCA_948150575.1
- Location
- OX411247.1:5110109-5112313[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-13 3e-10 39.6 0.0 4 45 305 346 302 346 0.92
Sequence Information
- Coding Sequence
- ATGTTCCCGGGGTCTACTAGTGATTACTTGATACCAGAATACCAATTTAGAAAAATGGGGAGTAGCGAGGGAcaacagacattttgtctgaaatggaaccatcacaaagctaatttgtctattttggctgatgtgcccatggatcattgcagcatcctttttcccggagtgaaagactttgaaatgcgcgctcttctcgagtatatgtacacgggagaagtcaacgtgactcaagcgcatataccgcgcatcatgaaagtcgcagagcaattagaagtgaagggtctgTTTGATATGAATGATCTACGACGTCGACCAGGAGACGAGCGTACTCCGGCGTCATCACCGCCTCGCGTCGTTCCCGCCGCGCCTTCCAGCGTGTCACCGCCCGCACCGGCACCGCCTCCGCGGTGGCCTCCGCAGCCGATAGCTCTTTCGGCCGCTTACGATTCTACCGACATGAACCCGTTGAAACGGAAGAAGCTGTCGAGCATGTTAGCATCGAGAGATACGCCGATACTCAGAAACGTATTAGCGCAGCCCACTCCACCGGACTCGTCCCAGCCGGTATCGCTAGTTTGCCATCCCGTACCGCAACATCCACCGACACGTATCGACACGAACGGTCTAGGTCATGATATGGATCGCGCCTCTAGCCCGCATCGCGCGTTCGATTATCGCCCTCGCCGTCTCTCGTCTCGCGCTTCGTCTCCGCATTATCATCGCTCGGACAGGTCAGAAGATGCGCATTCACCGTACACCGAACGATCTTTCGAAGACGAATCTTCTCGAACATTTCATCCTTCACCGCCTCCGCCAAATTTCCAGCAAGATGTCCGATCAGGCCTCGCACCGTACGTACCACCTCAGCAGAAGCCTGAATGGAAGCGATATAAACAATACACGCGATCTGATATCATGTCTGCTATCGAATGCGTCCGTAACGGCATGAGCGCTTTACAGGCGTCACGAAAATACGGTGTACCATCTCGTACTTTGTATGATAAAGTAAAGAAATTGGGCATAACCACTAGTCGACCTATGAGCAGGGGTGTCAAAAGAGAATCAAACGGCGCCGCGTTTCCATATGGGCTCAGTGGAACCGGCGGTGGAGAAGACGGGAGCACAACTGGACCCTTATTGGATGCATCCTTTCTGCAGCAAGCTCTAGAAGGTGCGAGTCGAGACGGCGGCCGTGAGGCGCTGCATGCTATGGCGTTGGCGGCCGCCGCTCATGCCGCTTTAGCCCCGCGTTCTCCAGTGCGCGAGCCGTCACATTCTCCACCCTCGCCACCGCCAGAAGAGGATCACGTCGAGGATCTTTCTATATCGAGAAAACGAGATCCAGAACCTCCATCTGGAGTCATCGTGCCCCCGAGAAACTATGCTCTAGATTGCGGCGATAGAGATTAG
- Protein Sequence
- MFPGSTSDYLIPEYQFRKMGSSEGQQTFCLKWNHHKANLSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMNDLRRRPGDERTPASSPPRVVPAAPSSVSPPAPAPPPRWPPQPIALSAAYDSTDMNPLKRKKLSSMLASRDTPILRNVLAQPTPPDSSQPVSLVCHPVPQHPPTRIDTNGLGHDMDRASSPHRAFDYRPRRLSSRASSPHYHRSDRSEDAHSPYTERSFEDESSRTFHPSPPPPNFQQDVRSGLAPYVPPQQKPEWKRYKQYTRSDIMSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKRESNGAAFPYGLSGTGGGEDGSTTGPLLDASFLQQALEGASRDGGREALHAMALAAAAHAALAPRSPVREPSHSPPSPPPEEDHVEDLSISRKRDPEPPSGVIVPPRNYALDCGDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_01451671;
- 80% Identity
- iTF_01451671;