Tpel009328.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- lola
- Assembly
- GCA_948150575.1
- Location
- OX411244.1:852854-863040[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-15 5.7e-12 45.1 0.0 4 44 244 285 242 286 0.92
Sequence Information
- Coding Sequence
- ATGAGTACTCGGCGCTCAAGTGAAGTTTCTAGTGTGCAAGACAGCGAGAGGCACTACAAACTAAGCTGGGCTAATCACCAACCCAATTTCATTGGTGCTTTTACTGTATTTTTGAATAATGGAATGCTCTGTGACTGCGCCCTGTCAGCCGAGGGACAGCAAATACCGGCACACCGTGTCGTACTGGGTGCTTGCAGTAATTATTTTTTGGATGTCTTTACTCAAAGCACAGGGCACCCCGTTATATTAATCCACGACATTTCGTTTATGGATCTGAGAGTTCTTGTGGACTTTATGTATTTTGGTGAAGTAAACGTGGCCTTAGACCGCCTTAAAAAAATAGTGACGACTGGAAAAATTCTCAAAATTAAAGGAATCATGGAGAATGCTGACCATTTGGATATTAATAATATCTGCAATGCTGAAGAACCACGTGTAAAAAATGAGACCCTTCTAAGCTCGTCCAGAAGTACAGCATACAGTAGCCAATCGATGAATATACCACCATACAGACCAACTATGAACACTACAGATCCATCAATATCGGAAGACAGGATGAGTAATTTATCCGTGACTATTAGCGGTGACTCTCCTGCAGTGGAAATCGTTCCAGAGATTATTTTAACTGAAGACCCGAACGATTCATTTGAGACCAGGTACACCCCGCCGTCTGCGAGAAGGAAGCGACTGAATCTCTCGGCTCGAAGAAGGGAGCCACGTAATGAACCAAACTTTAAAATGGCCTTAGAAGTGATCCGTAATGGCGAAATGGGGTTCTGTAAAGCGGCTCGTATTTACGGTGTCAACAACAGAACGCTCTGGCTCGAGTACCGCCGTCTGGGGTATCCCGTACATAGGCAGGGTGGTGTTTCTGGTGTAAATCGTCGCAGCAAGAAGTTGTATCGTCAAGAAAATGTGTGCAATGACCTTGGCACTGTAGACAGATCTAGTTTGCTCCGAGGAACGTCTGAACCACTATTAATGCGATCATCACATCCTACACTTAAAAAAATTGCCTCACATCCTCCTCTATTTAAGCAATCAACCAGCAAGGTGAAACCGAATGAACCAAGACCAACCAGAGTATCAACAATTATACAACAGCATGTAGGAAAGTCGATTAAAACAGAGAAGTTGGGTAGTGATGTAACATTGACATATCGCGCTAGTCACTGTCCTGTAATGAGATCTGGACCGGCATTAAGCTGCAATTATTGCTGGAATACTTTTGATGAATGCGGCAGAATATTACGCAGGAAGACAAAGTTCCATTGTCCTGAGTGCAGCTATAATTTGTGCATAGTACCATGTTTTCATGAATATCATTCCTCGCAACGACCTGAGACAACTTGA
- Protein Sequence
- MSTRRSSEVSSVQDSERHYKLSWANHQPNFIGAFTVFLNNGMLCDCALSAEGQQIPAHRVVLGACSNYFLDVFTQSTGHPVILIHDISFMDLRVLVDFMYFGEVNVALDRLKKIVTTGKILKIKGIMENADHLDINNICNAEEPRVKNETLLSSSRSTAYSSQSMNIPPYRPTMNTTDPSISEDRMSNLSVTISGDSPAVEIVPEIILTEDPNDSFETRYTPPSARRKRLNLSARRREPRNEPNFKMALEVIRNGEMGFCKAARIYGVNNRTLWLEYRRLGYPVHRQGGVSGVNRRSKKLYRQENVCNDLGTVDRSSLLRGTSEPLLMRSSHPTLKKIASHPPLFKQSTSKVKPNEPRPTRVSTIIQQHVGKSIKTEKLGSDVTLTYRASHCPVMRSGPALSCNYCWNTFDECGRILRRKTKFHCPECSYNLCIVPCFHEYHSSQRPETT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451649;
- 90% Identity
- iTF_01451649;
- 80% Identity
- iTF_01451649;