Basic Information

Gene Symbol
XBP1
Assembly
GCA_948150575.1
Location
OX411248.1:8501787-8502736[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.5e-18 2.8e-15 56.1 12.9 2 63 39 100 39 102 0.95
2 3 0.0066 5.4 7.1 0.2 33 57 84 108 84 113 0.84
3 3 5.8 4.7e+03 -2.3 0.1 36 51 181 196 175 197 0.58

Sequence Information

Coding Sequence
ATGAATTCGCCCATCATCATCACGGTACCCAATGGCTACCTGGCGGAAAAGGTCAATATGGATACTGACTCCTCGATACCATCCAGGAAAAGAAGACTTGATCATTTATCATGGGAAGAAAAAATGCAGAGAAAAAAGCTGAAGAATCGTGTGGCCGCTCAGACGTCTCGCGATCGGAAGAAGGCTAAAATGGACGACATGGAGTCACGTATCAAGCAGCTGGAGGATAAAAACGAGCAGTTGGTGAATGAAATGGAAAGTCTGAGAGCTTTGAATGAGCGTTTAGTTAGTGAGAACATGTCATTGCGTCGCAGTAAGACGGCGGCGCGGGACGTCGTGGGCGAGGCCTCTGGACCAGCAGAGTCCTATCCTCAGCAGAAGGAACCCTCCCCCACGGCGATCCGCGCGGCTCGTCTGCTTGTCACTCTATGCCTGCTCTCACAGACATACTCGCCCACTTCGACTCGGATGAATACCTCGACACGTTGCAAACTCTCGCAGACTCCCTCCTCCGAGAAATTGATACTGACCCTCCAAGCTCGCCTTCAAATGCCGAAATCAAAACTGGCGAACATAATGCAGGAACTGAAATGGTGGGGTCCACAACAAAGCAACTGGAACCCAGTAAAAGTGCAATCGTAG
Protein Sequence
MNSPIIITVPNGYLAEKVNMDTDSSIPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDDMESRIKQLEDKNEQLVNEMESLRALNERLVSENMSLRRSKTAARDVVGEASGPAESYPQQKEPSPTAIRAARLLVTLCLLSQTYSPTSTRMNTSTRCKLSQTPSSEKLILTLQARLQMPKSKLANIMQELKWWGPQQSNWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01452078;
90% Identity
-
80% Identity
-