Tshe018111.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- gata4
- Assembly
- GCA_902151425.1
- Location
- CABFVX010001299.1:99581-129322[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 5.3e-14 53.9 3.2 1 34 56 88 56 90 0.97 2 2 4.4e-19 7.4e-15 56.7 2.6 1 35 156 189 156 190 0.97
Sequence Information
- Coding Sequence
- ATGTCGCAGAGGGAGAGAGGATGTTGCCAAGTGTGCTGTATTTTGCTCGCGAGAGATTTGCAGACCTTTGCTGTCCTTTACAAGAAACTTTCACAAACGGTCGGTTTGGAGCGAGGCAGGGTTGACCAGATCGACGCCGCCGACTATTTCACGGAGGGCCGAGAGTGCGTCAACTGTGGCGCCATATCGACGCCCTTGTGGCGTCGCGACGGCACCGGCCATTACCTGTGTAACGCATGCGGCCTCTACCACAAGATGAATGGCATGAACCGACCGTTAGTCAAACAGCCAAGACGATTGCTCCCAACTCAGCATCACTGGCTAATTCGGTTCATTGTTGTTCTTTCAGTGAGCCAGCCGGGGGATTTCTGCAAGGGCTACTATGGGTTTAATGGGCTCCCGCGAGGTCCTTTGGAAGAAAAATCCAGTCGCCGCTTGTCGGCGTCCCGACGCGTTGGCCTGTCGTGTTCCAACTGTCACACCATCACGACGTCCCTCTGGCGACGCAACCAGTTGGGAGAGCCGGTCTGCAACGCTTGCGGCCTATACTTCAAGTTACACGCCGTCAACCGGCCGCTGGCCATGAAGAAAGACAGTATACAGACAAGAAAGAGAAAGCCGAAGGGTGGCAGCTCCAAGGCTGACAGTTCCGGCACCGGCGGTTCCGGCGTCACAACTGATGGCGCAGTCGTACAGAGCTACAAGAAGATCAAATTGGAACATCCTTCTGACGGCTATGGAGATATACGTTCTTCCGCTTCTTTGGCTCATCACAACAATAGCGCAACCAACTTGCATTCAGGGTTGAACCTCTTGAGCCATTCCCACAACAGCAGTGGCGCATCTCTAGTGTCGGGGTCTCTAAGCTACTCGGGCATGTACTCGCCGACCTCGGTGGCTCAACCGCAACTGCAGTACCACCATAGCCTCCACCACCAAACCAGCCCGCCTATCAACGCCTATTACGAGTTCGTACACCACCATATGAACCACGGGCAGCAAAACAACCCTTCGGGGGTCATTTCGCCCAAAGTGGAGTGCCCCTCCCCCGCCTCAGGTTCTTTGGAGCATCATAGCGATAACCGTTCGCCGGTGATGTTATCTTCTCATTCACCTAGCGGTTCAGATCTAGGAGGTTCGCCTCATATTGTCACCCtaggtaacaataataacaataaaagtgtTGTGATAAACAATGAAAACATGGAGAGACCATCCGTGGTCTCTTTGTCATCCTAA
- Protein Sequence
- MSQRERGCCQVCCILLARDLQTFAVLYKKLSQTVGLERGRVDQIDAADYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLLPTQHHWLIRFIVVLSVSQPGDFCKGYYGFNGLPRGPLEEKSSRRLSASRRVGLSCSNCHTITTSLWRRNQLGEPVCNACGLYFKLHAVNRPLAMKKDSIQTRKRKPKGGSSKADSSGTGGSGVTTDGAVVQSYKKIKLEHPSDGYGDIRSSASLAHHNNSATNLHSGLNLLSHSHNSSGASLVSGSLSYSGMYSPTSVAQPQLQYHHSLHHQTSPPINAYYEFVHHHMNHGQQNNPSGVISPKVECPSPASGSLEHHSDNRSPVMLSSHSPSGSDLGGSPHIVTLGNNNNNKSVVINNENMERPSVVSLSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01448107;
- 80% Identity
- -