Tshe055374.2
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- pnr
- Assembly
- GCA_902151425.1
- Location
- CABFVX010011554.1:6959-9894[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-19 8.3e-15 56.5 3.0 1 35 8 41 8 42 0.97 2 2 8.7e-20 1.5e-15 58.9 6.0 1 35 65 98 65 99 0.97
Sequence Information
- Coding Sequence
- ATGCTGGATACGGTGAAAGAGTGCGTAAACTGCGGCGCCAACTTCACCCCCCTCTGGCGTCGCGACGGTACCGGCCACTACCTGTGTAACGCTTGTGGTCTATACAACAGGATCAATGGCGTCAACAGACCTCCGGTGCGCAACCAACAGAAGAAGATTGCTTCGACTAGCAACAGAAGAAACGGTGTCTGCTGCGCCAACTGTAACACCACCAGCACTACACTATGGAGGAGGAACAATAACGGAGAACCCGTTTGCAACGCCTGCGGCTTATACTTCAAGTTGCACAACGTAAGTAGACAATTCAACACAGTTCCTAGATCAGCGGTTTTCAAACTTTTAGATCCACCTCGTGTTGGTAAAACTTACAAGATGAATTTCATACGAGGcctgttatttaaaaacaggAAGCTCAAGTTGCCAAAATGGAggtga
- Protein Sequence
- MLDTVKECVNCGANFTPLWRRDGTGHYLCNACGLYNRINGVNRPPVRNQQKKIASTSNRRNGVCCANCNTTSTTLWRRNNNGEPVCNACGLYFKLHNVSRQFNTVPRSAVFKLLDPPRVGKTYKMNFIRGLLFKNRKLKLPKWR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -