Tshe031494.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- Csrnp2
- Assembly
- GCA_902151425.1
- Location
- CABFVX010003130.1:85952-89092[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-25 4.5e-21 78.2 0.5 174 218 24 68 14 68 0.96
Sequence Information
- Coding Sequence
- ATGTCTAACGAGAGCTCGTACTATGCGCATGTTCATCtgtgcatagaggaatggaacagaagacgtgatcaaGTGGATCGACTAAATTTCCCTTGTGGTTGCACCAGAGATGGGTGTGCTAACTCCAGTGGACGAATCGAATTCAACCCAGTGCGTGTCCGCACTCATTTCATCCACACATTGATGAGGCTTGAACTAGAAAAGAAACATAAAGTCGATGAAGGAGATGAAGTGAACCATAAACACCAAACACATGGTACAAGGCATGTCCATTGGGGCGATGAAGATAGCTTGATTCCTCCACCCGTGTTAACCTCCACATACCAGGATACAACAAAAAATGGAGATAACCTCACATCTCCCACTAGTATTATGAGTTCAAAGTTCAGTGGTAGCTTTTTGGGAAACCTGGGTCAAGGCTCGGGTGTTGACTCTTGTGTTCAATCTAGCAGTTTTCCTAACTTTCACTATGGTGCTACAGGAGAAAGTTCTGGAATGAGCACTTCAGCAGATTTGTCTGGTTCCATCTCGGTATTCCCGGGAATGGTTGGCAATCTGCCAGCTAGAGAAGACTCGTTAGATCTTTATGCTTTGAGAGATGAGTGTTATTCTGAAGAGAACAGTAATGACCTTGTTACAGAGCAAGTAGAGGGTAATAGGAATGTTGATAACAATCGATTTGGTATTCATCACTATGCCCTTAGAAAAAATCGTTCATCAATTCAACATCCTGAGTTTGTTACTAATACTAGCTACCTTGTAAGTCAACAGCCAACTGTCTCTCCGAGAGGGTTTACACCTACAACTGTGTTTTCTGACAGCCTTGTTAGGTATCCCCATCCCCCAGTTTCTTCTGATTCTAATCCACTTGAAATGGCTTTCAGTGATAACGCAAAGTACCAACAGCAGTATTCATCAGGACTCTCCAACTTTTCAACAACACATTCAAGTGGGGTGTTCGGCCATTATAGCTCCATGTATGGTGCAGAATTTGCTTCGAAAGCAAACGCTAATGGAATGGTTACCACTGAATATAAAGATTCTCTTGTAGGGCCCaatattggtggttcagaattTCTTCATCAGCAGCAAGTTCCTCAAGGGACAAACAGTAGTTCATACCCACTCTTTCCATCACTTGTTGAAGGATTCACTCAACAGGAACGTGTCGACCAAAATAGCATTGGTAAAGATTCCTCAACATCATCCATAGGAGATAGCTGCTACACAAACCTTCATACTGTGTGCCCAATGAGTGATAAGCTTGAACCATTTTCAGAGCTTCTTCAAGGTCGCTACTCTTATGTGGCAACAGAAACTGCAAGTTCTGGTTTTGAAGATTCAACCTCAACAATGCCAGGTCCATCTGCTACATTCAGTAGCAGTGGGACATCTGAGCAACTAGCGCAGAGTAGTGGATTAACAATTAGATGTGGTGATACTGCATTAAGTGTTGGAATGGAGAAAAGTCAACGTTTTTCTGATGAAGGAAAGGATTGTAATGAAAACTTTggtgaaattattaaaaaaactatggtTGAAACTGTGTCAgcataa
- Protein Sequence
- MSNESSYYAHVHLCIEEWNRRRDQVDRLNFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKHKVDEGDEVNHKHQTHGTRHVHWGDEDSLIPPPVLTSTYQDTTKNGDNLTSPTSIMSSKFSGSFLGNLGQGSGVDSCVQSSSFPNFHYGATGESSGMSTSADLSGSISVFPGMVGNLPAREDSLDLYALRDECYSEENSNDLVTEQVEGNRNVDNNRFGIHHYALRKNRSSIQHPEFVTNTSYLVSQQPTVSPRGFTPTTVFSDSLVRYPHPPVSSDSNPLEMAFSDNAKYQQQYSSGLSNFSTTHSSGVFGHYSSMYGAEFASKANANGMVTTEYKDSLVGPNIGGSEFLHQQQVPQGTNSSSYPLFPSLVEGFTQQERVDQNSIGKDSSTSSIGDSCYTNLHTVCPMSDKLEPFSELLQGRYSYVATETASSGFEDSTSTMPGPSATFSSSGTSEQLAQSSGLTIRCGDTALSVGMEKSQRFSDEGKDCNENFGEIIKKTMVETVSA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01446603; iTF_01445666;
- 90% Identity
- iTF_01446603; iTF_01445666;
- 80% Identity
- -