Tshe021267.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- Iswi
- Assembly
- GCA_902151425.1
- Location
- CABFVX010001655.1:95490-119394[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-06 0.034 16.7 0.0 3 41 700 739 699 739 0.95 2 2 0.0047 24 7.6 0.0 3 21 802 821 800 824 0.90
Sequence Information
- Coding Sequence
- ATGTCCAACAATCAACGAGACAAACCAGTTTCAAGCCCGCTGAAATTGAAACCAGGTAGACCCCGGAAGAATGTTGAGTTGAACAAGTCCATTGTTGGCGATCCTGGAGATCACCGACATCGTAAGACAGAACAAGAAGAAGATGAGGAGCTGTTGGCAGAGACCAACTCGAGTCGTCGGACCATCATCAGTTTCGATCAGTCCCCACCCTATGTGAAAAATGGAGAGATGAGGGACTACCAAGTGCGGGGCCTCAACTGGATGATCTCGCTCTACGAGAATGGCATCAACGGAATATTGGCCGATGAGATGGGTCTAGGAAAGACCCTACAAACAATATCACTCCTGGGGTATATGAAGCATTATCGAAATATTCCCGGTCCTCATATTGTTATTGTTCCAAAGTCAACGTTAGCTAATTGGATGAATGAATTCAAGAAATGGGTCCCCTCTCTTAGAGCAGTTTGCCTCATAGGGGACCAGGAAACGAGGAATGTATTTATCCGTGAGACATTGATGCCAGGGGAGTGGGATGTGTGTGTGACCTCTTATGAAATGGTGATCAAGGaaaaaagtgtgtttaaaaaatttaactggCGCTACATGGTGATTGATGAGGCACACCGCATCAAGAACGAAAAGTCCAAGCTGTCGGAAATAGTTAGAGAGTTCAAGACAACCAACCGTCTCCTTTTGACCGGGACCCCCTTGCAGAACAACCTGCACGAACTTTGGTCACTTCTCAACTTCTTGTTGCCGGAGGTGTTCACGTCCAGCGATGATTTTGATGCTTGGTTCAACACTAACACCTTCATGGGGGACAATTCGCTAGTGGAGAGACTTCACGCGgTCCTACGTCCATTCCTTCTTCGTCGTTTGAAATCTGaagtggaaaaaaaactcaaaccaAAGAAAGAAGTGAAAGTTTACATTGGTTTGAGTAAAATGCAAAGAGAATGGTACACCAAGGTCTTGATGAAGGACATAGACATCGTGAACGGCGCTGGCAAGATTGAAAAGATGCGGCTCCAAAACATCTTGATGCAGCTCAGAAAGTGCTCAAACCACCCATACCTTTTTGATGGAGCCGAACCTGGACCCCCCTACACGACAGATCAACATCTTGTATACAACTGTGGTAAAATGGTGCTCTTGGACAAGTTGTTACCTCGACTTCAAGAGCAGGACTCGAGAGTTCTTATTTTCAGTCAGATGACTCGAATGTTGGATATTCTAGAAGACTACTGTCATTGGAAGTGCTACAAGTATTGTCGTTTGGATGGTCAGACTCCCCATGAGGATCGTCAGAGGCAGATCAACGAGTTCAACGCCCCAGGTAGCGAGAAGTTCCTATTCATGTTGTCCACTCGAGCCGGTGGTCTCGGGATCAACTTAGCCACTGCTGATGTGGTCGTCATATATGACTCTGACTGGAATCCACAGATGGATCTTCAGGCCATgGATCGTGCTCATCGTATCGGCCAGATGAAACAAGTCCGAGTGTTCCGATTCATCACAGAGAACACAGTGGAGGAAAAGATAGTGGAGCGGGCAGAGGTGAAACTGAGGCTTGACAAACTTGTTATCCAACAAGGACGTTTGGTTGACAGCAAACAAAATCAACTTAACAAAGATGAAATGTTGAACATGATTAGGCATGGAGCGAATCATGTGTTTGCTTCGAAAGACTCTGAAATCACAGAAGAAGATATCGACACTATTCTTGAGAAGGGTGAAGCAAAGACAgaagaattaaaacaaaagctcGAAACTCTAGGAGAATCCTCTTTGAGAAACTTTACAATGGATACAGGACCCTCTGAATCAGTGTACCAGTTTGAAGGCGAGGATTACAGACCTCCGAAACAACCCATTGTTCAAGACTTCCAGTTCTTCCCACCACGGTTATTTGAGCTTTTGGAtcaggaaatatattatttccggaAAACAGTGGGCTACAAGGTTCCAAAAAATCCAGAGCTTGGTTCAGATGCATCTCGCATTCAGAAAGAAGAGCAAAGGAAAATTGATGACGCTGAGCCCCTTTCAGATGAGGAAATGTTGGAAAAGGAACGATTACTCACACAGGGATTCACCACGTGGTCGAAGCGAGACTTTAACCAGTTCATCAAGGCCAACGAGAAGTATGGCAGAGACGACATTGAAAACATTGCTAAAGAGGTGGAAGGGAAGACTCCCGAGGAGGTGATGGAGTATAGCACAGTGTTCTGGGAGCGATGCAGTGAGCTACAGGACATTGACCGTATCATGGCACAGATCGATCGAGGGGAGGCCAAGATACAGCGCAGGGCCAGCATCAAAAAAGCTTTGGATGCCAAGATGGCGAGGTATCGTGCACCATTCCACCAGCTGAGGATAGCTTATGGCACTAACAAAGGAAAAAATTACACAGAGGAAGAAGACAGATTCCTTGTGTGCATGCTCCACAAGCTAGGCTTTGACAAAGAGAACGTTTACGAAGAACTTAGAGCAGCCGTTAGATCTGCACCCCAATTTCGCTTCGACTGGTTCATTAAGTCTCGAACGGCGATGGAACTCCAGAGGCGTTGTAACACGCTCATCACGTTGATAGAGCGTGAGAACCAAGAGTTGGAAGAAAAGGAGCGTGCAGAGAAGAAGAAGAGGGCGCCTCGAGGCCTTTCTGGGAGTTTGGGTGGCACACCCGGTGGGATGGCCATGGGAGGCACCAAGAGCGCTCAGAAGAGAAAGGGGGAGAATCTTTCCACACCTGAAAATAAGTctggaagaaaaaagaaaaaagtttga
- Protein Sequence
- MSNNQRDKPVSSPLKLKPGRPRKNVELNKSIVGDPGDHRHRKTEQEEDEELLAETNSSRRTIISFDQSPPYVKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHIVIVPKSTLANWMNEFKKWVPSLRAVCLIGDQETRNVFIRETLMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPEVFTSSDDFDAWFNTNTFMGDNSLVERLHAVLRPFLLRRLKSEVEKKLKPKKEVKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDQHLVYNCGKMVLLDKLLPRLQEQDSRVLIFSQMTRMLDILEDYCHWKCYKYCRLDGQTPHEDRQRQINEFNAPGSEKFLFMLSTRAGGLGINLATADVVVIYDSDWNPQMDLQAMDRAHRIGQMKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDSKQNQLNKDEMLNMIRHGANHVFASKDSEITEEDIDTILEKGEAKTEELKQKLETLGESSLRNFTMDTGPSESVYQFEGEDYRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNPELGSDASRIQKEEQRKIDDAEPLSDEEMLEKERLLTQGFTTWSKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSTVFWERCSELQDIDRIMAQIDRGEAKIQRRASIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFIKSRTAMELQRRCNTLITLIERENQELEEKERAEKKKRAPRGLSGSLGGTPGGMAMGGTKSAQKRKGENLSTPENKSGRKKKKV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510566;
- 90% Identity
- -
- 80% Identity
- -