Tshe051395.2
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- Smarcc2
- Assembly
- GCA_902151425.1
- Location
- CABFVX010008892.1:1-14469[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-14 1.3e-10 43.6 0.2 3 44 158 199 156 201 0.95
Sequence Information
- Coding Sequence
- GCAAACCCTTTTACCAAAGACCAGCGAAAAGAAGAAAACATGTTACTGGCAAAGACTCTCCTCTTTGTTACTGGCGAAGACTCTCCTCTCTGTTACTGGCGAAGACTCTCCTCTCTGTTACTGGCGAAGACTCTCCTCTCTGTTACTGGCGAAGACTCTCCTCTCTGTTACTGGCAAAGACTCTCCTACTCTGTTACTGGCGAAGACTCTCCTCTCTGTTACTGGCGAAGACTCTCCTCTCTGTTACTAATGTCCTGCCCTCCGCTCCCCATCCCCCACTACaagctgtcactggacagaccGACAGAGTGTTGCTGTGAGAGAATGAGAGTTTGGAGTATTCCGGCGGAAGGAGACGGTACACAAAAGTCCTGTAAGAGTTTACTAAAGGATAGTCGAGGTAAACAGCTATTGAAGTATGTTCGCAAGCCTGCAGCCCTCCGCAACAAAACAGCGGCCAGCCTGACCAGGGAATGGACAGAACAGGAGACTCTGCTGTTGTTGGAAGGACTGGAATTGTTCAAGGATGACTGGAACAAGGTGTGTGAGCATGTGGGCAGTCGGACCCAGGACGAGTGCATCCTTCACTTCCTGAGACTGCCCATAGAGGACCCTTACTTGGAGGACCATGAAGCAGGAGGTGGGGCATTGGGCCCTCTAGCCTACCAGCCTATTCCATTCAGCAAGGCAGGGAACCCCATCATGTCAACTGTGGCATTTCTAGCGTCAGTGGTCGACCCCAGAGTTGCAGCTTCAGCTGCCAAGGCCGCCATGGAGGAATTTGCCAACATTAAGGATGAAGTCCCCGCTGCGCTGTTGGACAGTCACATCAAGAATGTAGAAGCCTCGTCCACTGATGGAAAGTTTGATCCGGCCGCAGGTTTGGCTCAGAGCGGGATAGCAGGCACAGAGGAAGAGGACGAGGAGAAGAAGGAAGGAGAGGAGAACATGAAGCCAGCCACAGAGGTGGTCGAGCACAAGTTGGAACCCATCGAAATGGACAAGAAGCAGACAGAGGAACCAGTCACCAAGGAAGAACGAGGGATTACAATGGATGTGAAAGAGGAGAACAAGGAGGGGATAAACACCGTGTCCGTGTCTTCACCAGGTACAAGTCCAGGAGGGGGGGGGCTGCTAGGGTGTTCTAACAAGGAGGGGATAAACACCGTGTCCTTCACCAGGTACAAGTCCAGGAGGTACAAGTCCAGGAGGTGGGGGCTGCTAGGGTGTTCTAACAAGGAGGGGATAAACACCGTGTCCTTCACCAGGTACAAGTCCAGGAGGTGGGGGCTGCTAGGGTGTTCTAACAAGgttggggaagggggagggattATTTCGCGAGCTGGTTCCGGCACCGCAGAGTCTGAGCAGGAGCGGCTAGTGAAGGACGCCCAACTACAGAGTGCAGCAGCTGCTGCTCTGGCTGCTGCAGCTGTAAAGGCCAAGCATCTGGCAGCTGTGGAAGAGAGAAAGATCAAGAGTTTGGTCGCACTGCTCGTAGAGACCCAGATGAAGAAACTGGAGATCAAGCTGCGTCACTTTGAGGAACTAGAGACCACGATGGAACGTGAACGTGAGGGACTCGAGTACCAGCGCCAGCAGCTCATCACTGAGCGCCAGCAGTTCCATCTAGAGCAGCTGAAAGCCGCAGAGTTCCGCGCGCGGCAGCAAGCCCACCAGAGACTGGCCGTGGAGCAACAGGGTCAGAGTGCCCCTAGCCCTGCGGGAGGTCCCCCCACACCAGCATCTGGAGACCAACAAGCAGGACCGGGGACCCCTAGTACCACCCCCACACCACCTTCTCCCCAGGCTACCGCGGCTCCGTCACCTTCCCCTGCCCAACCCTCTCCCCAGCAACACACCTAA
- Protein Sequence
- ANPFTKDQRKEENMLLAKTLLFVTGEDSPLCYWRRLSSLLLAKTLLSVTGEDSPLCYWQRLSYSVTGEDSPLCYWRRLSSLLLMSCPPLPIPHYKLSLDRPTECCCERMRVWSIPAEGDGTQKSCKSLLKDSRGKQLLKYVRKPAALRNKTAASLTREWTEQETLLLLEGLELFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALLDSHIKNVEASSTDGKFDPAAGLAQSGIAGTEEEDEEKKEGEENMKPATEVVEHKLEPIEMDKKQTEEPVTKEERGITMDVKEENKEGINTVSVSSPGTSPGGGGLLGCSNKEGINTVSFTRYKSRRYKSRRWGLLGCSNKEGINTVSFTRYKSRRWGLLGCSNKVGEGGGIISRAGSGTAESEQERLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAVEQQGQSAPSPAGGPPTPASGDQQAGPGTPSTTPTPPSPQATAAPSPSPAQPSPQQHT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -