Tshe013103.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- dnajc2
- Assembly
- GCA_902151425.1
- Location
- CABFVX010000820.1:46175-65038[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-05 0.13 14.9 0.0 3 39 733 781 732 788 0.77 2 2 2.1e-13 1.1e-09 40.7 0.1 2 44 839 885 838 887 0.90
Sequence Information
- Coding Sequence
- ATGGAGGTGAACTTGTGGAGCAGCAAAGTCGGAATGATCGTGGCTCTTGCTGCGGTTGGGTTTACAGGGGGTGCTTGGCTCTTAAAGTACACAAGAGAGGTCCGAGGGGACAACATTCCACCAGCGTTGCCAGATCTTGGACAATCAGGCAAAGGAGATGGCCCCCACCAACAGTCACGTCAATCTCTCGAGGACCCTTGGTCCATTATCTCACGAGATTTGGGGGCAGGTATCAGACTCTATGAATCTTCTAACCATATAATGTCCATACATCATCAGGCCATCAAGGCCGAATACCAGGAGTTGGAGCTTCAATACTCTCCCAGCCGCTGGTCCAATCGTTTCTCCGACCCTTCTGAAGTAATTAACCATCACTGTCAAGTTGTTACGGCAGCTAGCGAGCGTGTCAAGTCTACAGTGCCTTGCGAAACTGAAATATCCTATGGGCAGCGCCAAGGACAGAAACTGGACGTCTTTGGTGGAACACGTCTTCTTAACTGTAAAAAAGTGGTTTTTGGAGGCCATTCAGCTGGGGCTCACCTGTTAGCAATGCTGCTATCTAGTGTCTGGTACAGTAAACTACACGACGATCAGCGGAAGTTAATCAACGGATTTATTCTTTTCAGCGGAGTGTTTGACTTAGAGCCAATAGTTAACACATACATCAACGATGCGCTAAGTTTATCACAGAGTGACGCGAGATTGTTTAGTCCAATGTTTCTTGATATAAAGCAGTCAGGTTGTGAGAAACTTCCCACGATACTTGTGGTGGTAGGTCAGTACGACTCTCCTGCGTTTCAAGAACAATCCAAGCAATATGTACAGAAGCTACAGCATGAGAACTATGAAGTCCGCCTCCTCACAATACCAGACGTGGACCATTTCGATATCGTAGCTAATTTGGATAGTGATGAATATATCTTAGTTAAAACTATGATTGAGTTCATTAAACGAGTTGTAGAATGCATAGGTCCAGCGTTTCTTAGTTTTTGGCAAAGTCAGCCTGGTGTCACAACTGATGTGCTAACACTTCAAGAAGACGACGTCTTAGAAGATGAAAAAAGCTCAATATTTGACGAAGATAATGTTAGCTTTCTTAGAAGCCTTGATCCTAAAGAATGGAAGGATCAAGATCATTATGCAGTTCTTGGACTCTCCAAACTACGCCACAAAGCCACAGATGATGACATAAAGAGAGCCTATCGCATTAAGGTGCTACATCATCACCCTGATAAACGCAAAGGTAAAGGGGAAGAAATTCGTCCGGATGACGACTATTTTACTTGCATTACAAAAGCTTGGGAGGTGTTGGGAAATCCTCGGAACCGTCGCTCATATGATTCTATTGACCCACTATTTGATGATTCAATACCGACGGCCAGTAAAAAGTCAActttttttgaaacttttggTAAAACATTTGAAGAAAACGCTCGTTGGTCTGAAAGACAGCCTGTCCCTAAACTTGGAGGGGCACTGTCACCTCGTGAACAGGTTGATAGGTTTTATTCCTTCTGGTACAACTTTGAGTCGTGGAGGGAATATTCATATTTAGATGAAGAAGAAACAGAGAAGGGTCAATCTCGTGAAGAAAGAAGATggattgaaaaacaaaacaaggtaACACGGGCGAGGAGGAAGAAGGAAGAAATGGCGAGGATCCGAACTTTAGTAGACACTGCATATGAGCTAGATCCTAGAGTTCTAAagttcaaacaagatgaaaaggATCGGAAGTTGGCTATGAAGCAGGCCAAGAAAGACGCTATACGTGCTCGTTTTGAAGAAGAGGAGCGAAAAGTCCAGGAGGCCGAAGAGGCAGCTCGCAAACTCAAAGAGCAAGCAGATGCCGAAGAGAAAGCCAAGCAAGATGCTTTAAAAGCAGAAAGAGAGGCTCAGAAAAAAGCtctgaagaaagaaaaaaccaaCTTGCGCAAGCTAGTGAAAGCCAATAATTACTATGTAACCACTGATTCAGAAATGATAAAACATATggaaagtttagaaaaaatttgtGAGAGTATGGACATTGATGGAATCATCAAACTTGTTAGTGATTTGTCTCTAAATGGTCGTGAAGACTATATCAAGGCAATAACAGAAGCAGAACAACGAATTGAGCAAGAACGTCAGGAGCTAATGGAAGTGGCCAAGCGCAGTAGTTCAAATCAAGGCCAAGGTAAAGGGAATTTAGCACCGTGGTCATCTGAACAACTTCAACTGCTCATCAAGGCAGTTAACATTTATCCAGCCGGAACCAGCCAAAGATGGGATGTGGTAGCAAATTTTATAAACCAACATAATGCTTCAGGAAACGTGACACGATCTGCAAAAGAAGTACTAGCTAAAGCTAAAAATCTTAAAAGCTCAGACTATTCGAAGAATGTTTTGAAAGTAGCTGCTAATGAAAAAGCTtatgataattttgaaaaagaacACAAAAGTAATGTTGACATTGATGCGACCACTTCACAGAGGTTTGATAACCCAGCAGAACAACAAGGTTTCTCGACAACACCGTGGACTGCGAAGGAACAACAGCTTTTGGAGCAAGCACTAAAGACGTATCCCGCCTCAACAGCGGAACGTTGGGATAAGATAGCCGAGTGTGTACCATCACGCTCCAAGAAAGACTGCATCAAACGTTACAAAGAGTTGGTGGAATTAGTGAAGGCAAAGAAGGCTGCCCAGGCTGCAACAACAGCTGCAAACAAGACTAAATAA
- Protein Sequence
- MEVNLWSSKVGMIVALAAVGFTGGAWLLKYTREVRGDNIPPALPDLGQSGKGDGPHQQSRQSLEDPWSIISRDLGAGIRLYESSNHIMSIHHQAIKAEYQELELQYSPSRWSNRFSDPSEVINHHCQVVTAASERVKSTVPCETEISYGQRQGQKLDVFGGTRLLNCKKVVFGGHSAGAHLLAMLLSSVWYSKLHDDQRKLINGFILFSGVFDLEPIVNTYINDALSLSQSDARLFSPMFLDIKQSGCEKLPTILVVVGQYDSPAFQEQSKQYVQKLQHENYEVRLLTIPDVDHFDIVANLDSDEYILVKTMIEFIKRVVECIGPAFLSFWQSQPGVTTDVLTLQEDDVLEDEKSSIFDEDNVSFLRSLDPKEWKDQDHYAVLGLSKLRHKATDDDIKRAYRIKVLHHHPDKRKGKGEEIRPDDDYFTCITKAWEVLGNPRNRRSYDSIDPLFDDSIPTASKKSTFFETFGKTFEENARWSERQPVPKLGGALSPREQVDRFYSFWYNFESWREYSYLDEEETEKGQSREERRWIEKQNKVTRARRKKEEMARIRTLVDTAYELDPRVLKFKQDEKDRKLAMKQAKKDAIRARFEEEERKVQEAEEAARKLKEQADAEEKAKQDALKAEREAQKKALKKEKTNLRKLVKANNYYVTTDSEMIKHMESLEKICESMDIDGIIKLVSDLSLNGREDYIKAITEAEQRIEQERQELMEVAKRSSSNQGQGKGNLAPWSSEQLQLLIKAVNIYPAGTSQRWDVVANFINQHNASGNVTRSAKEVLAKAKNLKSSDYSKNVLKVAANEKAYDNFEKEHKSNVDIDATTSQRFDNPAEQQGFSTTPWTAKEQQLLEQALKTYPASTAERWDKIAECVPSRSKKDCIKRYKELVELVKAKKAAQAATTAANKTK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -