Tshe017200.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- ARID4B_1
- Assembly
- GCA_902151425.1
- Location
- CABFVX010001200.1:31947-51140[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 1.9e-08 37.0 0.0 1 40 278 317 278 328 0.91
Sequence Information
- Coding Sequence
- ATGGCATCGCTCTCACCTATAGTGAACATCCTTCCCCACCAAACATACTTAAGGGTGACCTTCAAACTTGGCCTGGGATCAGCTGTCATCACAGATGACCAGATCAGGGGCACACTTAGGGTTGGATCCACTTGTGAGGCGAGACACCCAGACAAGAAAGAGTTCTCCGAAGCCACCATTACCAAAATTCAAGACTGTAGTCAATATACTGTGGTGTTTGATGATGGTGACATCACAACTTTAAGAAGAACAGCTCTTTGTTTGAAGAGTGGCCGCCACTTTGCAGAAAGTGAAACCTTGGATCAATTGCCTCTCACTCATCCTGAGCACTTCAGCAGTCCGGTGGTGGTCGAACGAACCGGCCGCAGGAGCAGACAAACTCaCAATGACAGCGTGGAGGATGAAGTAACTCCCAAGAAAGGCAAGCAGAAGGAAGAAAAAGAGGCAGACATAGGCAAGGTGGTGTGCGTGGAGCTAGGGGATAAAAAGAAACAGAAGGATAATTGGTTTCCTGGTCTGGTGGTGGCTCCTACGGCGCAGGACACAGTTCGCATCAGAGTGAAGGAGGAATATCTAGTCAGGTCCTTCAAGGATGGCAGATACTTCACAGTTCCAAAGAAGGAAGCGACAGAGTTCACCAAGGAgattggagggaaagtggacaataacactttaaaaacagCTGTTGAGAAAGCTCTGCTATTCCTGGACAAAGATGAACTTCCCCCGCATTGGGACAGAGACTTGCTGTTTGGGCTGGATGACAGCAGCGGTAACAGCGACAGCGACGCAGGCTTCGATTCCGATAGTTCTGATGATGAGCCTCGAGAAGAAAAAGACCACTTTGTAGCCCAGTTGTACAAGTTCATGGATGACAGAGGGACACCAATCAACAAGGGACCCACAATAGGCTCCAGGGATGTGGACCTCTACAAACTATTCAAGGCAAGTGAGCTCTGCCACAACTATCTTCTTGTTTGTCAGTTAATATTGTAG
- Protein Sequence
- MASLSPIVNILPHQTYLRVTFKLGLGSAVITDDQIRGTLRVGSTCEARHPDKKEFSEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSSPVVVERTGRRSRQTHNDSVEDEVTPKKGKQKEEKEADIGKVVCVELGDKKKQKDNWFPGLVVAPTAQDTVRIRVKEEYLVRSFKDGRYFTVPKKEATEFTKEIGGKVDNNTLKTAVEKALLFLDKDELPPHWDRDLLFGLDDSSGNSDSDAGFDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINKGPTIGSRDVDLYKLFKASELCHNYLLVCQLIL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01446276;
- 90% Identity
- iTF_01446276;
- 80% Identity
- iTF_01446276;