Tshe026346.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- osa
- Assembly
- GCA_902151425.1
- Location
- CABFVX010002309.1:64847-102867[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-21 2.2e-17 65.6 0.0 2 89 477 600 476 600 0.95
Sequence Information
- Coding Sequence
- ATGCCGCCTCGCCCGTCGAGCGGTCAGTCAGATGGTAGTGGCCCAACGCGGCTGAGTCACTCACCCATGTCCTCCCAGAGCAGCTACCAACAACCCTTGGCACCCCCAGGCCCACATAACATGCATGGAGGTTACAAGATGGGTGTAGGGGGCCACCCCGGCATGGTTCCCCCTGGAGGTCAACAAATGACCCCATTTTCTCCTCAGTCCCAACAGTACCCACAAGGGAACTACAACCCTCGACCTCAAGGGCAGCTAAGTGGCGTGCAGTACCCTGGCAGTGGCGGGCACAGTCAGGGTTATGGGGTAGCGCCCAGCCAGGGCCCCACTCCCCAGCAAAGCCCGCAACCCAACAGCATGGCTCCAGGCCAATATCCCAGCAGGCCTATTCCCAACCATGTGGCACATTCACAATTTGGTGGCTACCAGGGTTGGGGTGGCCCAGCTGTCAACCAGGGCCAAGGGCCCGGTATGATGTCGGGGAAGGGCCCGGGCCCGCAGAACAGTGGTGTTACCCCCCAAGTGGTGACTAACTCACCGCGTGCCCACACCCCTCCACACTACCTCAAGCACCACTTGCAGCAAAAAATGGGTTTTGGTGGCTCAAGTAGTAGCCCTCTGCAGGTTGGAGGGTATAGCAGTGGGCCACCTATGGTTCCCGGACCAGGTCCAGGTCCTTCTTCCAACTCTGGTCCTGGCATGGGGCCACCTGGCTCTAACATGCACCAGCACCATAGTATGGGTCCCCCTTCATCAGGAAGTCACCATCATCCTGGAATGGGGCCCCCACCCTCCGGGGTGGGCAACTCGTTAAGTATGGGGCCACCCTCTTCTTCTGTGGTGTCAGCCCCTACAAGTGTCCCACCTAGCATGGGAATTGTGGGTAACTCATCAGGACCATCATTGTCGAACAGCCATCACGATGATCCAATGCCACCACCTTCAGCATCCTCTCACGGTCCAGAGCTGGGCGGTAGTGCGGGGGATTTAACGGACAATGTCATCATCACCACTACATCTGCAGGCACAACAACGAATGTGACACAATCTGTCCCAGGCAGTGTGACCTCAGTGGTGACTACTGGACCAGATGGGGCCCCGATTGATGAGGGATCTCAACAGTCAACTCTCTCGAATGCATCTGCAGCATCAGGTGAGGATCCCAGCTGCACTCCCAAGTCGCGCAAGGATGGCACAGTTGTTGGAGGTTATCACAGCCACCCACCAACACCCCAAAGCACTGTGGCTTCGCCAGGGGCTGCTAGCCTCACCTCTATGCATGAGGAATACGGAGATGTGAACAGTCCCACAAGTTGGCCCCGCACGCCCGCCAGTCCGGTGTTTAACAGCCATGTCCACCAAGATCCATACAGAGCCAagAAACCAGATAGCCTGTGCAAGTTGTACGACATGGACGAGTCCCACGAGCGTCGTATGTGGTTGGACAAGCTTTTGCAGTTTATGGATGAGCGCGGGACTCCCATATCCGCCTGCCCCACCATCTCCAAGAACCCCCTCGATCTCTTTCGCCTCTACTTGTATGTGAAGGAGAGAGGGGGCTTCATGGAGatTGTAAAATCAAATCGTGGACAGCATCACGGATACGTGCGGTCATCTCGGAGACAGCCGAAACAAGACACATGTGGCCAGCTCGGAGGCTGCCGGGATAGTAACTTCGTGACAAGGGTAACCAAGAACAAGACCTGGAAAGACATCGCAGGACTGTTGGGAATTGGTGCATCGTCAAGTGCAGCATACACACTTaggaaacactacaccaaaaaCCTGCTGGCATATGAGTGTCATTTTGACCGGGGAGGCATAGACCCGCAACCCATTATCAATCAAGTGGAGGCATCCTCTAAAAAGAAAGGGGCAAAAGCTACATCTGTGCCATCTCCAGGGTCATCCAATTCTCAAGATTCATTTCCAACTGCATCCACTGGTTCAATGGATGGTTATGGCTATGGATACCCGCCTGGGAGTACACCCGACTACAACTCTCCTCCAATGCAGCGACCAGCTACCCAAACTAACGCTCCTTCTCCTcatgcagGCATAAGGCACTCCTTGGTACCCTTTTGCTCTTTATCTGCAAACACCATTTATCACGTCAATAAAAAAGAAGGGATAGAAAACTACCAAACTTCCTATCTCAAGGCAAAGAGGAAAGTTTGCTGCTAa
- Protein Sequence
- MPPRPSSGQSDGSGPTRLSHSPMSSQSSYQQPLAPPGPHNMHGGYKMGVGGHPGMVPPGGQQMTPFSPQSQQYPQGNYNPRPQGQLSGVQYPGSGGHSQGYGVAPSQGPTPQQSPQPNSMAPGQYPSRPIPNHVAHSQFGGYQGWGGPAVNQGQGPGMMSGKGPGPQNSGVTPQVVTNSPRAHTPPHYLKHHLQQKMGFGGSSSSPLQVGGYSSGPPMVPGPGPGPSSNSGPGMGPPGSNMHQHHSMGPPSSGSHHHPGMGPPPSGVGNSLSMGPPSSSVVSAPTSVPPSMGIVGNSSGPSLSNSHHDDPMPPPSASSHGPELGGSAGDLTDNVIITTTSAGTTTNVTQSVPGSVTSVVTTGPDGAPIDEGSQQSTLSNASAASGEDPSCTPKSRKDGTVVGGYHSHPPTPQSTVASPGAASLTSMHEEYGDVNSPTSWPRTPASPVFNSHVHQDPYRAKKPDSLCKLYDMDESHERRMWLDKLLQFMDERGTPISACPTISKNPLDLFRLYLYVKERGGFMEIVKSNRGQHHGYVRSSRRQPKQDTCGQLGGCRDSNFVTRVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASSKKKGAKATSVPSPGSSNSQDSFPTASTGSMDGYGYGYPPGSTPDYNSPPMQRPATQTNAPSPHAGIRHSLVPFCSLSANTIYHVNKKEGIENYQTSYLKAKRKVCC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -