Tshe026775.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- Kdm5
- Assembly
- GCA_902151425.1
- Location
- CABFVX010002368.1:46236-51113[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-26 2.1e-22 81.7 0.0 3 89 97 179 95 179 0.94 2 2 8 1e+05 -4.0 0.1 58 83 734 762 733 764 0.72
Sequence Information
- Coding Sequence
- ATGTCTTCTCCTGTTAAGTATGCTTGTGGTTCTAAATCTGCCAGACATTTACCTGATTTCGAGTTCATTGTTCCAAAGGAGGCTCCCGTGTTCGAACCCACTAATGAAGAATTTGAGGATGCACTTGCATTTATTAGAAAGATCCGTCCAACTGCGGAAAAATttggtatttgtaaaattaaacctCCACCTGGTTGGCAGCCTCCATTTACTGTTGATGTTGACAACTTCAAATTTACACCTAGAATTCAACGTTTAAATGAATTAGAGGCTCAAACAAGAATTAAGTTGAATTTCTTGGACAAAATTGCAAAGTTTTGGGAGCTTCAAGGTTCGTCCCTCAAAATCCCAACAGTAGAAAAACGACAATTGGATTTATATAGCTTGCACAAACTAGTTCAAGAAGATGGAGGATCAGATACAGTGACAAGAGAAAAGAAATGGAACAAGATTGCTACAAAGATGGGTTTTCCTGTAGGTCGAGGTGTGGATTCACAATTGAAGAGTCACTACAATAGAATATTACATCCTTATGATGTATTTGATGAAGTTAAGGATGTTCCCAATGTAAAAAGTGAATATGAAATGGAAGATGGCAAGAAACCAGACAAAGATTACAAGCCTCATAGTATTGCTACAAGACAAGAAATAAAACCaccatttgaaaaatatggCCGTCGTTCAAAGAGGTTTGGTTTGGATGATGAAGTGCACGATGTAGATGATATTGGGTGTGGTAGCACAGATTCTgttgaaaataaagaattaaggAGATTGACATTTTATGGAGCAGGTCCTAAAATGGCTGGTTATCATATGATCATGAGGGAACTTAAACCAAAGAAGAAAGCAAGAACAAAGAAAGTAGAGAATGCTGGCAATGCAGATCCTTTGTCAAAGTATGTGTGTCAGAATTGTAGCAGGGGTGATGTAGAAGAAAGTATGTTGTTGTGTGATggatgtgatgatagttatcATACATTTTGCCTGGTGCCACCACTGACAGAAATACCTAGAGGGGATTGGAGGTGTCCTAAATGTGTTGCCGAAGAGGTGAGTAAACCGATGGAAGCTTTTGGATTCGAACAGGCTCGTAGAGAATATACTCTGCAGCAGTTTGGGGAAATGGCTGACAAGTTCAAAATGGATTATTTCAGAACCCCAGCACATTCTGTTCCATCTTCAATTGTAGAGAGAGAATTCTGGCGACTAGTTTCTTCAATCGATGAAGATGTGACTGTAGAATATGGTGCGGATTTACATACCATGGATCATGGCTCAGGTTTTCCcactaaatttacaaaaaatcttCACCCTGTTGATCAAAAGTATGCCGATTCAGATTGGAACCTGAATAATCTTCCTGTGTTGGAAGCTTCCGTATTGGGCCACATTAATGCTGATGTATCTGGCATGAAAGTGCCTTGGATGTATGTTGGAATGTGCTTTGCTACCTTTTGTTGGCATAATGAAGATCATTGGAGCTATTCCATCAATTATCTTCATTGGGGAGAGCCAAAAACTTGGTATGGAGTTCCAGGAGGGAAAGCAGAAATATTTGAGTCCGCTATGAAAAGAGCAGCTCCTGAACTATTCCACTCTCAACCTGATTTGTTACATCAACTTGTTACTATCATGAATCCCAATATACTCATGGATGCTGGTATCCCCGTGTGTCGCACAGATCAGCATGCGGGTGAGTTTGTCATTACTTTCCCGCGAGCTTATCATGCAGGGTTCAACCAAGGCTACAACTTTGCAGAAGCTGTTAACTTTGCACCAGCAGATTGGCTGAGAATGGGCCGAGAATGTGTTACTCACTATTCTACACTACGTcgtttttgtgttttttcacaTGATGAATTAGTGTGCAAAATGGCTTCGGATCCTGAAAAACTCGATGTAACAATTGCAGCTGCAACTTATCGAGACATGTTTGAAATGGTGAGCTCTGAGACAAAACTGCGTAAAGCTCTTCTTGAGTGGGGTGTGGTAGATGCTGAACGAGAGTCGTTCGAGACCCTCCAAGACGATGAGAGACAATGCGATGTTTGTAAAACTACGTGCTATCTTTCTGCTATTACTTGCAGTTGCAACCCAAAACGTATTGTTTGCTTGCGGCATTATTCGAGTCTGTGTGGCTGTCCGGCAAAAAATCATAGCATGAAGTATCAATTCATCCTAGACGAATTGTTGGAAATGTTGCAAAAACTCAAGTTTTATGCAGAATCATTTGATAAATGGtcagaaaatattagaaatgcTTTATCccataaatatcaacaaaaggTCACACTCTCCAGACTGAAGGAGCTGTTTCAAGAAGCCGAAGAGAAAAACTTTCCTGAGGAATCAAGTCTTATGAATTCTATTCGGCTTATCATAGAGAAAGGAGAAAAGTACTCTAATGTTGCTCAAAAAATCCTAAACCGAAGGGCTTGTGCATCAAATGATAAAGTTGATTGCACTACCAAACTAACAGTGGAAGAAGTAACAAGGTTTTATGAAGAGATTGAAGACCTTGCTGTTCTTATAACTGAACGAgatgaggtgaaagatttggttgaaaatgtaaaatcatttgAAAAGATGGCAGAAGAACTTTTAAGTAAAGACAATCCTCAAAATGAGGAACTAAAACAGTGTATAGAAGCTGAGTTGGCATTGAATGCAGTTATTCATCTCACAGATATATCAAAGTTGAAAGAACTGTGGGAGAAATCaaattggtttgaaaatattCGTAATCTGGAGGAGAGTACAAGTAATATCAAGTTGGAAACTTTGCAAAGACTTGTTAACATTGGCGTTAGCTTACCGACCAATAAAAATGTGGAAAAGCATTTGGCGAACTTAAAAGACCTGCTTTCTAAAGTGGAAGAAGTCGAACAAAGGGCCAACAGTTTACTGACTCAAGAGTATCGTGTCCAGACAAGTGATATTCAAGATGTTCTTGAAGCGGCAAAAAAAGTGTCATGTGTAACACCGAGCGTAACAGAGTTACAAAACGCCTTAGAGAAGGGAAATGAATGGTCTATGAgaGTTAAAATCCCCGAGGGAGAAGCACTTCAATGTCTTGCTGAACGCGTAGCAAAATGGCAGCAGAGAATAAATGAAACACTGACATTGGAGGAAGTCACTTTAGCTTTGAAGAAAGTTTCAGAAGTGTGTGAGAAACCCATGAAAAGTATGTGCAGTGAAAACTTGAAAGAGGGGGACAGTGAAAACTCACAATTATCACAAGCTGTAAAAGTTGTTTCGTCCTCAGAGAACAATATAAGTACACACTTTGTTGACTCTCAACTAGAACCCAATGTAGCAGAACTAGCTACTACCGCAGGCTTAGGAACTATCACCGTTAAAGAAACACAGGCATCTAAAAAACCATCACTTTCAAATGTTGAGCAGGAAAGCGATTCATCAAGCCCACGTGACAAAACAGAGAGGGAAAACACTGTTAGCACTGTTTTCCCTAGTACTGATGAGCTAGACGTCGTCTCCGTCTCAGGAGATAAGTTCAACATACCTAGCGGTGATAAAAATTTCAGTTTGAAACTCTCAAATAATACCACCTCTCAATTAGTAATATCTTTAAGTGCAGAAACGAGCTTGCACCTGGAGAAATTAATGATGGAGGCAGATTTAATGGAAGTGTCACTGGATGACAATgataaaatatggaaaattctCAAACATACAAAGAAACGCAAGGGATTAGAGGTTTTTCCGGATATCAAAGAGGTCGAAAATGAGATACAAGCCAACAAACTCGAGCGCGAGGAACAGAAAGCGCGGAAACGAACGGTCGTCGAGTCTTGCCTGATCGGTCAAAGCAAGAAACTGCGCTCTGCCGCAGAGGGGAGGAAGACAAAAAGTCGGGCAGAAGTGAAGCTTGTGGTTTGTGAAGGGAAGGACGATATGCTCTGGGATAACGGGGACGACTGCGCCGCTCAACTGTGTCTGCAGCCTCAGTACAGCTCGGTAGACTGGGTGCAGTGTGATGGGGGGTGCGACGAGTGGTTCCACCTGCTGTGTGTGGGGCTGCACAAAGGGGACCTGCAGGAGAACGAAGACTACATCTGCAAGGGATGCAAGGAGAACCAGGAGGAGGTGGAGTTGGCCAACGTTATGTTGGAGGTGGACTGCTCCACTCAGGACCCACTCGCAATGGACACGGTTAATATCTCACCAACAAACCAGGACCTTAGCCAGCCTCTAGAAATTGTCTTGGATTAG
- Protein Sequence
- MSSPVKYACGSKSARHLPDFEFIVPKEAPVFEPTNEEFEDALAFIRKIRPTAEKFGICKIKPPPGWQPPFTVDVDNFKFTPRIQRLNELEAQTRIKLNFLDKIAKFWELQGSSLKIPTVEKRQLDLYSLHKLVQEDGGSDTVTREKKWNKIATKMGFPVGRGVDSQLKSHYNRILHPYDVFDEVKDVPNVKSEYEMEDGKKPDKDYKPHSIATRQEIKPPFEKYGRRSKRFGLDDEVHDVDDIGCGSTDSVENKELRRLTFYGAGPKMAGYHMIMRELKPKKKARTKKVENAGNADPLSKYVCQNCSRGDVEESMLLCDGCDDSYHTFCLVPPLTEIPRGDWRCPKCVAEEVSKPMEAFGFEQARREYTLQQFGEMADKFKMDYFRTPAHSVPSSIVEREFWRLVSSIDEDVTVEYGADLHTMDHGSGFPTKFTKNLHPVDQKYADSDWNLNNLPVLEASVLGHINADVSGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGGKAEIFESAMKRAAPELFHSQPDLLHQLVTIMNPNILMDAGIPVCRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVTHYSTLRRFCVFSHDELVCKMASDPEKLDVTIAAATYRDMFEMVSSETKLRKALLEWGVVDAERESFETLQDDERQCDVCKTTCYLSAITCSCNPKRIVCLRHYSSLCGCPAKNHSMKYQFILDELLEMLQKLKFYAESFDKWSENIRNALSHKYQQKVTLSRLKELFQEAEEKNFPEESSLMNSIRLIIEKGEKYSNVAQKILNRRACASNDKVDCTTKLTVEEVTRFYEEIEDLAVLITERDEVKDLVENVKSFEKMAEELLSKDNPQNEELKQCIEAELALNAVIHLTDISKLKELWEKSNWFENIRNLEESTSNIKLETLQRLVNIGVSLPTNKNVEKHLANLKDLLSKVEEVEQRANSLLTQEYRVQTSDIQDVLEAAKKVSCVTPSVTELQNALEKGNEWSMRVKIPEGEALQCLAERVAKWQQRINETLTLEEVTLALKKVSEVCEKPMKSMCSENLKEGDSENSQLSQAVKVVSSSENNISTHFVDSQLEPNVAELATTAGLGTITVKETQASKKPSLSNVEQESDSSSPRDKTERENTVSTVFPSTDELDVVSVSGDKFNIPSGDKNFSLKLSNNTTSQLVISLSAETSLHLEKLMMEADLMEVSLDDNDKIWKILKHTKKRKGLEVFPDIKEVENEIQANKLEREEQKARKRTVVESCLIGQSKKLRSAAEGRKTKSRAEVKLVVCEGKDDMLWDNGDDCAAQLCLQPQYSSVDWVQCDGGCDEWFHLLCVGLHKGDLQENEDYICKGCKENQEEVELANVMLEVDCSTQDPLAMDTVNISPTNQDLSQPLEIVLD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444486;
- 90% Identity
- iTF_01444486;
- 80% Identity
- -