Tshe040893.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- XBP1
- Assembly
- GCA_902151425.1
- Location
- CABFVX010005117.1:7408-13508[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-10 3.5e-07 32.5 6.0 3 39 76 112 74 121 0.92 2 2 7.2 2e+04 -1.9 0.1 28 47 175 187 172 193 0.55
Sequence Information
- Coding Sequence
- ATGACTATGGCttcaaaaactataattatttccttATCTAAATATGTTGCTGATCGAAATATGGGCGTTCCAATCAAGGTAGAAAGTTCTGGACTAACAACTGGATTCGATGTAAAGCCTACTCTTGCCAATGTGACTTATGACAACATTAATGATGACACAAATTTTTCTGATGTGTTATTTTCTTCAAGTAAGAAACGAAGATTGGATCACCTTTCCTATGAACAGAAGCTTCAAAGAAAgaaattgaAGAACCGGGTTGCTGCACAGTGTTCCAGAGATAGAAAGAAAGCAAGATTAGATGAGCTTGAGATTGAAGTTAAACTCTTAAAAGAAATGTCGCCAGACCCGAGATGTCGGCTGCAGTCCCATCGTTGGACCAGCAGCGTCTATCGTTCACCCTCCGCCGCAGGGGCTGGGATTACAGCCGGCACAGGGCCTGACGCTTGCAGTATGGAGGATCCTTACGATTTGCCTTCTCTTCCCGACCTCTTGGGAGACATTGTTACAGACGATTACATGTCCCAGTTGGAGGAACTCGCAGAGTCTCTTCTTCGAGAAGCTACTGCAAGCTGTGAGGAAGGAAGATGGGAGTCTGCACAAGCTGCTTGTAGAAATGCTGAATCAGCTGAAACACCCCAAGTGTTGGGGGGAGCACCAGAAGATATGGGACCCTCTCCAATGGCTTGCGATTACCTAGCGGCAACAAATTCTTGCCACCAAGAGCTGCTCCCAACTATTCATATTCCAGACACACGAGAGACTTTCAGGGGAGCTTGTGAACCTTTGATAGATGATGTAAACGAGACCATCACCATCACACTGCCGTGCGAGGGCATAGTGTGTGTGGAAGATGCGGTGCAAGAAGTGGTCACTAGTGAATCTTGCGAGGTGTTTGAAGAGGCAGTCTCCCCTTTATTTAGAGATACACACTCTCCTATCCCTCACTCACCCCTCTTGTACACTATAGATGACATTGCTGTTAAAAAAGGGGCCACCTTCTCAGACTGTGGCTACGAGTCTTTAGACTCCCCTTACAGCGAGGACTCGACAAACTGTGGGCTAACTGATTTGTGGAATGAAAGTTTTTCAGATTTGTTCCCTTCTTTGATTTAG
- Protein Sequence
- MTMASKTIIISLSKYVADRNMGVPIKVESSGLTTGFDVKPTLANVTYDNINDDTNFSDVLFSSSKKRRLDHLSYEQKLQRKKLKNRVAAQCSRDRKKARLDELEIEVKLLKEMSPDPRCRLQSHRWTSSVYRSPSAAGAGITAGTGPDACSMEDPYDLPSLPDLLGDIVTDDYMSQLEELAESLLREATASCEEGRWESAQAACRNAESAETPQVLGGAPEDMGPSPMACDYLAATNSCHQELLPTIHIPDTRETFRGACEPLIDDVNETITITLPCEGIVCVEDAVQEVVTSESCEVFEEAVSPLFRDTHSPIPHSPLLYTIDDIAVKKGATFSDCGYESLDSPYSEDSTNCGLTDLWNESFSDLFPSLI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445411;
- 90% Identity
- iTF_01445411;
- 80% Identity
- -