Tshe041821.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- ATFC
- Assembly
- GCA_902151425.1
- Location
- CABFVX010005363.1:41594-42523[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.63 1.8e+03 1.4 0.3 34 57 38 61 35 73 0.63 2 2 2.1e-13 5.9e-10 41.4 9.7 1 62 237 298 237 300 0.96
Sequence Information
- Coding Sequence
- ATGTTCCTTTTTCTTCCAGAGCCATACAATGACTGGATGGAGGACAGTATTGATATCTTCCAGGGCATGGCCCCGGTGGAGGACTGCCTGTACAGCGGGGGTAGTCACGAGTCTGCGAAGCTGACCAGCGAGAAGCCACAGCTGCCGGACAGCACTAGTCTCCTTCTTCAGGAGTTCCAGACCGTGTTCGAGGAGGTAGAGCTTAACAACTCCACACTCACCCCTCCACAGAGCCCCACCTACTTGCAAGTGTATGGTTCAACGCTCCCCTACCACTTAACAGCACCAGTACAAAACTCTCCCCTCAAGACTGTTTTGACCAACTTGGTTCCCATCCACAAGAAAGAGGAGCAGTTCTTGTCCCCATATGAACAGATTGTCCCTGTCACCCCTTGCCCCGATGTGGAGCTTGAACTAGCCGTTGTCGAGGAATTAGTCCGTTCCCGTGCCGGGGAAATGGTCAGTGCGGAGCCCCAGAGCTTGTGGGACACCACAGACAGCGAGCCCACCACTGTCTCTTCACCGTCTAGTTTTGCCGATTCTGAGTCGGACAATTCCTTCGCCCCTCCCAGCCCTTCCACTAGCTCCAACAGCAGTTTTGGGAGTACAGAAGAGGACCCAGAGTGGGCTCCCCCTTCTCCTGGTCCGGTTAAGGTGACCGGTGGTGGCAGAAAACGTGGCGGGGCAAAACCGTACTCACGAGGTGCTCCCGAGGAAAAGAAGCTTCGCAAGAAAGAGCAGAATAAGAACGCTGCCACCAGGTACCGTCAGAAGAAGCGAGCGGAGGTGGAGGTGATTGTCTCTGAAGAAAAGGGCTTAGAGGACATTAACAAGGAGTTGACGGCTAACGTCGATGAACTTCAGCGGGAGATCAAGTACCTCAAGAATCTAATGCGGGACGCTTTCCGTCGCCGCGGCTTGATCAAGTAG
- Protein Sequence
- MFLFLPEPYNDWMEDSIDIFQGMAPVEDCLYSGGSHESAKLTSEKPQLPDSTSLLLQEFQTVFEEVELNNSTLTPPQSPTYLQVYGSTLPYHLTAPVQNSPLKTVLTNLVPIHKKEEQFLSPYEQIVPVTPCPDVELELAVVEELVRSRAGEMVSAEPQSLWDTTDSEPTTVSSPSSFADSESDNSFAPPSPSTSSNSSFGSTEEDPEWAPPSPGPVKVTGGGRKRGGAKPYSRGAPEEKKLRKKEQNKNAATRYRQKKRAEVEVIVSEEKGLEDINKELTANVDELQREIKYLKNLMRDAFRRRGLIK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01447242;
- 90% Identity
- iTF_01447242;
- 80% Identity
- -