Tshe005941.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- -
- Assembly
- GCA_902151425.1
- Location
- CABFVX010000290.1:263526-265454[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.019 53 6.3 0.0 26 63 18 55 13 57 0.90 2 17 0.02 56 6.3 0.0 26 63 74 111 71 113 0.90 3 17 0.02 56 6.3 0.0 26 63 130 167 127 169 0.90 4 17 0.052 1.5e+02 4.9 0.0 26 63 158 195 157 197 0.90 5 17 0.02 56 6.3 0.0 26 63 186 223 183 225 0.90 6 17 0.043 1.2e+02 5.2 0.0 26 63 214 251 208 253 0.90 7 17 0.02 56 6.3 0.0 26 63 242 279 239 281 0.90 8 17 0.019 54 6.3 0.0 26 63 298 335 293 337 0.90 9 17 0.019 53 6.3 0.0 26 63 354 391 349 393 0.90 10 17 0.048 1.3e+02 5.0 0.0 26 63 382 419 380 421 0.90 11 17 0.019 54 6.3 0.0 26 63 410 447 405 449 0.90 12 17 0.029 81 5.7 0.1 26 63 445 482 443 484 0.87 13 17 0.045 1.3e+02 5.1 0.0 26 63 473 510 470 512 0.90 14 17 0.02 56 6.3 0.0 26 63 501 538 498 540 0.90 15 17 0.024 69 6.0 0.0 26 63 529 566 527 568 0.90 16 17 0.015 44 6.6 0.1 26 63 557 594 554 596 0.89 17 17 0.31 8.9e+02 2.4 0.0 26 58 571 603 569 608 0.74
Sequence Information
- Coding Sequence
- atgacccgcaatacacgaacactggactcgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgccggtccgcacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgccggtccactcactggacacgcaggtccactcactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccacacactggacacgcaggtccgctcactggacacgcaggtccgctcactggacacgccggtccactcccatgccgtacacactaccgcggcacgcgccacacgaactcccggactcttcagtcgcgagccaagaactgccttgaggctaccgctgagcttgtatttatag
- Protein Sequence
- MTRNTRTLDSPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVRSLDTQVHTLDTQVRSLDTQVHTLDTQVRSLDTPVRTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVRSLDTQVHTLDTQVRSLDTQVHTLDTPVHSLDTQVHSLDTQVRSLDTQVHTLDTQVRSLDTQVHTLDTQVRSLDTQVRSLDTPVHSHAVHTTAARATRTPGLFSREPRTALRLPLSLYL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450198;
- 90% Identity
- iTF_01450202; iTF_01450199;
- 80% Identity
- -