Tpod024634.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- -
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000007.1:22341858-22342223[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00088 6.4 8.3 0.1 20 32 38 49 30 52 0.83 2 3 0.0079 58 5.2 0.1 19 27 65 72 59 81 0.78 3 3 7.9e-05 0.57 11.6 0.1 17 35 90 108 85 109 0.77
Sequence Information
- Coding Sequence
- ATGGCCTGGCACAGTGGTATAAAGACCTTTTTCTGTCCTGTTTGTGAGAAGGGCTATTACAGTGCGACTCAGCTCAGAACTCATGCCAGGACTCACTCCTCCATCAGACCCTATCTCTGTAACATATGTGGCAAGTCTTACAAGCTGGATTCAGACCTCAAGAGACACTCTTTCATCCACTCTGAACTATCGCCATACCTGTGCAACATTTGCGGCAAGACCACCAATAGTAAGAGCGAACTGAATGTCCACATTCAATTGCATTCTAATGAGAAAAAGTATCTCTGTTCAGACTGTGGTCGAGCCTTTAAGCTGAGGAGTGTGCTTGAAGAAACACTCTGCGGTCCACAGCCCAGAAAAACCTGA
- Protein Sequence
- MAWHSGIKTFFCPVCEKGYYSATQLRTHARTHSSIRPYLCNICGKSYKLDSDLKRHSFIHSELSPYLCNICGKTTNSKSELNVHIQLHSNEKKYLCSDCGRAFKLRSVLEETLCGPQPRKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01449972;
- 90% Identity
- iTF_01449972;
- 80% Identity
- iTF_01449972;