Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.25 1.8e+03 0.4 0.0 17 25 7 14 5 14 0.80

2 18 0.21 1.5e+03 0.7 0.0 17 25 26 33 19 33 0.82

3 18 0.21 1.5e+03 0.7 0.0 17 25 45 52 38 52 0.82

4 18 0.21 1.5e+03 0.7 0.0 17 25 64 71 57 71 0.82

5 18 0.21 1.5e+03 0.7 0.0 17 25 83 90 76 90 0.82

6 18 0.21 1.5e+03 0.7 0.0 17 25 102 109 95 109 0.82

7 18 0.21 1.5e+03 0.7 0.0 17 25 121 128 114 128 0.82

8 18 0.21 1.5e+03 0.7 0.0 17 25 140 147 133 147 0.82

9 18 0.0042 30 6.1 0.1 17 26 159 167 152 168 0.86

10 18 0.22 1.6e+03 0.6 0.0 17 25 178 185 172 185 0.83

11 18 0.21 1.5e+03 0.7 0.0 17 25 197 204 190 204 0.82

12 18 0.21 1.5e+03 0.7 0.0 17 25 216 223 209 223 0.82

13 18 0.21 1.5e+03 0.7 0.0 17 25 235 242 228 242 0.82

14 18 0.21 1.5e+03 0.7 0.0 17 25 254 261 247 261 0.82

15 18 0.21 1.5e+03 0.7 0.0 17 25 273 280 266 280 0.82

16 18 0.21 1.5e+03 0.7 0.0 17 25 292 299 285 299 0.82

17 18 0.21 1.5e+03 0.7 0.0 17 25 311 318 304 318 0.82

18 18 0.0036 26 6.3 0.1 17 26 330 338 323 339 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.25	1.8e+03	0.4	0.0	17	25	7	14	5	14	0.80
2	18	0.21	1.5e+03	0.7	0.0	17	25	26	33	19	33	0.82
3	18	0.21	1.5e+03	0.7	0.0	17	25	45	52	38	52	0.82
4	18	0.21	1.5e+03	0.7	0.0	17	25	64	71	57	71	0.82
5	18	0.21	1.5e+03	0.7	0.0	17	25	83	90	76	90	0.82
6	18	0.21	1.5e+03	0.7	0.0	17	25	102	109	95	109	0.82
7	18	0.21	1.5e+03	0.7	0.0	17	25	121	128	114	128	0.82
8	18	0.21	1.5e+03	0.7	0.0	17	25	140	147	133	147	0.82
9	18	0.0042	30	6.1	0.1	17	26	159	167	152	168	0.86
10	18	0.22	1.6e+03	0.6	0.0	17	25	178	185	172	185	0.83
11	18	0.21	1.5e+03	0.7	0.0	17	25	197	204	190	204	0.82
12	18	0.21	1.5e+03	0.7	0.0	17	25	216	223	209	223	0.82
13	18	0.21	1.5e+03	0.7	0.0	17	25	235	242	228	242	0.82
14	18	0.21	1.5e+03	0.7	0.0	17	25	254	261	247	261	0.82
15	18	0.21	1.5e+03	0.7	0.0	17	25	273	280	266	280	0.82
16	18	0.21	1.5e+03	0.7	0.0	17	25	292	299	285	299	0.82
17	18	0.21	1.5e+03	0.7	0.0	17	25	311	318	304	318	0.82
18	18	0.0036	26	6.3	0.1	17	26	330	338	323	339	0.87

Coding Sequence: ATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATGCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCACTCAGGTCCGAGGTTGTGTAATTCATCCCCTAGGGCCCAGATGATACAAGTATATCGCTCAGGTCCAAAGTTGTGTAATTCATGCCCTAGGGCCTAA
Protein Sequence: MIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSCPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYHSGPRLCNSSPRAQMIQVYRSGPKLCNSCPRA

Sequence clustering based on sequence similarity using MMseqs2