Tpod000657.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- grn
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000001.1:4950211-4959823[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-20 3.4e-16 60.3 4.7 1 35 91 124 91 125 0.98 2 2 0.089 6.4e+02 1.9 0.1 9 25 155 170 153 170 0.91
Sequence Information
- Coding Sequence
- ATGAACTGGGCAGCTCCAATCGTTATCCAGCTCATGAACTGGGCAGCTCCAATCGTTATCCAGCTCATGAACTGGGCAGCTTCAATCGTTATCCAGCTCATGAACTGGGCAGCTCCAATCGTTATCCAGCTCATGAACTGGGCAGCTCCAATCGTTATCCAGCTCATGAACTGTGCAGCTCCAATCGTTATCCAGCTCATGAACTGTGCAGCTCCAATCGTTATCCAGCTCATGAACTGGACAGGTTTTTGTCTGGTCCAGGGTCGAGAGTGCGTCAACTGCGGCGCCACGTCCACCCCCCTCTGGCGTCGGGATGGCACCGGCCACTACCTGTGCAACGCCTGCGGGTTGTACTACAAGATGAACGGGCAGAACAGGCCGCTCATCAAACCTAAGAGGAGGCTGACCCCTCCGCTTAGAATCGAACCCACTAGACCAGATAGTGGCCATCTTGGATATGCCACCCCTTGTCTACGGCAACACGCGCTGTTAAACCCCCTCTGCAAGGCCCGTGATGGGTTCTGTTAG
- Protein Sequence
- MNWAAPIVIQLMNWAAPIVIQLMNWAASIVIQLMNWAAPIVIQLMNWAAPIVIQLMNCAAPIVIQLMNCAAPIVIQLMNWTGFCLVQGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTPPLRIEPTRPDSGHLGYATPCLRQHALLNPLCKARDGFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -