Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0023 38 6.2 0.4 21 29 16 24 13 24 0.92

2 5 1.2e-19 2e-15 58.3 8.3 1 29 37 65 37 65 0.98

3 5 6.6e-18 1.1e-13 52.8 5.2 1 29 82 110 82 110 0.97

4 5 3.8e-19 6.2e-15 56.7 5.5 1 29 143 171 143 171 0.97

5 5 0.75 1.2e+04 -1.8 0.2 6 10 207 211 206 211 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0023	38	6.2	0.4	21	29	16	24	13	24	0.92
2	5	1.2e-19	2e-15	58.3	8.3	1	29	37	65	37	65	0.98
3	5	6.6e-18	1.1e-13	52.8	5.2	1	29	82	110	82	110	0.97
4	5	3.8e-19	6.2e-15	56.7	5.5	1	29	143	171	143	171	0.97
5	5	0.75	1.2e+04	-1.8	0.2	6	10	207	211	206	211	0.82

Coding Sequence: ATGTATTTCTCCTCTTCTATGTTGCATGTCAGTTGGTCATGTTTCCGCAGCTTGTCAGGGTGTCCCAGGGCGGACCGCACTCAGATACAGGCTCACTCCCAGGAGCTCAAGTGTCCCACCCCGGGATGCGACGGTTCCGGTCACGTGACAGGAAACTACTCGTCTCACCGCAGCCTTTCCGGGTGTCCTAGAGCCAACAAACCCAAAAGCAAACCCAGGGATGGACAGGATTCTGAACCGCTCAGATGTCCCATACCAGGATGTGATGGGTCCGGGCATGCGACGGGGAAGTTCTTGTCTCATAGAAGCGCCTCGGGCTGTCCCATCGCCAACCGCAACAAACTGCGGGTGCTGGAGAATGGCGGCACCGTGGAGCAGCACAAAGCGGCGGTGGCGGCGGCGACGGCCATGAAGTTCGAGGGCGTCAACTGTCCGACACCAGGCTGCGACGGTACGGGTCACATCAACGGATCGTTCCTCACGCACCGTTCCCTCTCCGGGTGTCCCATGGCCGGGCAGACTACCCTCAAGAAGAACAAATACCCCCACGATGACATGAGCAACATGTACCCTAAACCTCCCACCGGTAAGTCCAACCACAAGCTTCAGATAGAGAGAGGGTGCAGGGGTGTGTACCTCGTGTGA
Protein Sequence: MYFSSSMLHVSWSCFRSLSGCPRADRTQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKLRVLENGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGTGHINGSFLTHRSLSGCPMAGQTTLKKNKYPHDDMSNMYPKPPTGKSNHKLQIERGCRGVYLV

Sequence clustering based on sequence similarity using MMseqs2