Basic Information

Insect: Timema podura
Gene Symbol: -
Assembly: GCA_033556935.1
Location: JAVRXN010000009.1:116184144-116214683[-]

Transcription Factor Domain

TF Family: THAP
Domain: THAP domain
PFAM: PF05485
TF Group: Zinc-Coordinating Group
Description: The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.8e-14 1.6e-10 43.3 0.4 1 87 5 88 5 88 0.85

2 5 7.5 4.4e+04 -2.9 0.1 40 59 642 662 625 686 0.57

3 5 4.4 2.6e+04 -2.2 0.1 52 62 683 695 662 719 0.70

4 5 3.6 2.1e+04 -1.9 0.7 35 40 725 730 682 770 0.53

5 5 3.5 2.1e+04 -1.8 0.4 49 62 920 936 873 947 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.8e-14	1.6e-10	43.3	0.4	1	87	5	88	5	88	0.85
2	5	7.5	4.4e+04	-2.9	0.1	40	59	642	662	625	686	0.57
3	5	4.4	2.6e+04	-2.2	0.1	52	62	683	695	662	719	0.70
4	5	3.6	2.1e+04	-1.9	0.7	35	40	725	730	682	770	0.53
5	5	3.5	2.1e+04	-1.8	0.4	49	62	920	936	873	947	0.67

Sequence Information

Coding Sequence: ATGGCTGTAACTTGTGCCGCAGCTTCTTGTAAAGCCGATTGCACGAAGGAAGAATATGCTGGATTGGCATTTTTTCCATTTCCAATTGATGAAactatTTGTAAATCATGGATTGAACGATGTGCAAGGTACGATCTACTCAACAAATCAATTTCTGATCTAAATTTGTCAGAAAGGTTGTGTCAACTTCATTTTGAGGACCACTGTTATGACAATACCGAAATGGGATTAGTTCTAAAGCAGAGTGCGAGGCCGTCTTTATTTGACCACGACATGACTCAGTTTGGTTCCCAAATAGATGAAGAAAGAGGAATAAGTGTACACCCACAGGTTGCAACGGTCCACTATGGATCATTGGAAGATGGTGTCAACGTCATCACTTTCCAAGTAGAGATGGATAAAGGAGGCGAGACAGAAAGGATGCACTTGGACAGGCAAGTGGTAAACTGTTTCAAAACCATGCAGGGGAGTGGCGAGATGATGGAACCATACAATATTGTGGTGGAGGAGGTCCAGACAATGCAGGTGTTGAATGAATGGGCCGCCGAGGTGGAGCAACCTGCAACCAGAAAAACGGTTCACATGATTGATTTTCCAGTGTGCACAACTGAGGATCATGATGATGGTGGTAATCTCCCTAAGATTGAGGGCGTCGGCACGGTGGTGCGGCCTGCGGACATGTCGATGCACGTGATGGAGTTCCCAGTGTGCAGGATGGACCTAATGTGTCGGGTGTGTGCGGAGGAGTGTCACAACTTAGTGCCTGTGTTTGGAGAGCAAGGGGTTGCTATGGACCTTCCCAAGAAAATAACTTGGTACCTCCCCATACAGGTGAAACAAGAGGACCAGCTGCCCCTAAAGCTGTGCTCGCTGTGCATCGCCAAATTGAATTCCTGCCACGAGTTGGTCAACATGTGTGTTGCTGCCGACGCCAAACTGAGGCGCTTGTTTTGTGCAGAGCCAAGCATCTTACGCAAGCCATTGTTGAGGCCGGCTGATGACATGTCTGTACAAACTGAGTCTCAAGGTGAGATACATGTGATCTGGACTCTGACGTGTGACGCTCCTTGCGACACTACAATTTCAAATGAAGACACAGAGACAGATGATAGCAATGAGAAATCAAAGAACCAAATGATCTCCTTGTCGGATGCCTGTAACAAGACTATCGGTTTTAAAAATGGCCAACTTTATGAGGTACGTAAGGTGGTGGATGTCTACGTCGAGTCGGCGGACGAGACTTTAGACCCAAGCAAGAGGACGACGACCAAGTTTAGAATGGAAGTGTGTAGTGACGTGAAGAGGACTGATGCAGAGTTAAAGTCCAAGATTGATAGCGTTGTGCGGGACATGATACAAACCACCAAGGAAGAGGTGGAGGTTTGTGTGAATGAAGACAACTTAGACGAGCGACCGTGTGATGACAATGAGGAAGACAAAAGTGCGATTAAGCGTGTGTTTAGTAATAAGAGAAAGTGTCCTCACAAAACTTCTTGGCAGTGTAAAAAGTGTGGCCACATGACCCGAAGAAAAGGTTCACTTATAATGCATCAAAGACAGAAACACAAGCCTGACGAGTTCGCTTGCTGTTACTGTGACAGACAGTTTCACAATGCCATCGCGTTGAGTGCTCACAAACGCTACCACAACAAGAAGTTAAAACAACCCAATGAATGCGAGCGGCCTTCATACGTCTGTGAACATTGCGGAAAATCCTTCCAAACGAAAAAAACCCTTAAAGAGCACTACTTTGCTAACCATAGTGTGGAAAAACCTTTTCAGTGTAAAAAGTGCCATAAAACATATGGGTCGTCAGTCAGTTTGGACATTCACATGGCAACTCATTCTAAAGAAACTCCTTTACTTTGTGACTTATGCGGGAAAAGTTTCAAACACTTGAGTAACCTAAGGAGCCACAAGCGGTCACACCTGGACAGTAGCCGCAAAAACCGCCAGGTGTGTGATTTGTGTGGGAAGGGGTTCCGATCGCGGTTCCACTTGTCAGAGCACATGAACATACACAATGGGCTGCGACCATACCCTTGCCCCGTGTGCAGCAAGAGTTTTGCCAAGAAGATTCAGCTTCGTCAGCACAGCTCAGCACACCTGGGCACCCAACCCTTCAAATGCCCGACATGTGGGGTGGCGTTCAACCGTCGGGGCAACATGACCCAGCACCTCAAGAGACACGAACAAGAGCGCAAGTATGTCTGCAGGGTGTGTTTGATGGAGTTCCTATCCTTGGGGGCAGTGTTGGCCCACCGCAAGAAGCACACTCAGGAGGAGGTGGAGCAGAGTCTCCGACAGAAAGTAGGAGATGACCTTGAGGAGCATGCCTTCAAGTGTAAGGTGTGCGGAAAGTTCCTGGCTAAGAAGGACACGCTCGAGATTCACATGCGTTCACACTCGGGAGAAAAGTTGTTTGGGTGCTTGGTGTGCGGTAAGCGCCTATCCAATAAGGGTTCCCTCAACTATCACATGCGGGCGTTCCACACGGGTGAGCGTCCACACTCGTGCCAGTACTGCGGGGAGGGTTTCCTCTCCAGAGAGGCGTGCATGGTGCATGAGCGCATCCATACTGGCGAGAAGCCCTTCAAGTGTGAGATGTGTACCATGGCATTCCGCTGCACCAGCAACCTGACCCAGCACATGCGAGTCCACTCTACCGAGCGACCATATGTGTGCCAAACCTGCGGCAAGCGCTTCCCTCGCAAGGGTACCCTGGATGTGCACATGCGCATACACACAGGTGAGCGCCCCTTCAACTGCAACATCTGTGGCCGAGGCTTCACGCAAAAGAACGATATGCTGAAACACAAGCGCACACACGTGGGTGGAGCAGAGCGGCCATGGCCGTGCGCCATGTGCGGGGAGCAGCTCATGAGCCGCACACAGTTGCTAGAGCATGAAGCGGTACAACACATGATGGTCCATGGCCGGCCTATAATCCCGGAACTCATCCATGTTGAGGTCCCTGTTGCGGGAGTACCGACCCGGTAG
Protein Sequence: MAVTCAAASCKADCTKEEYAGLAFFPFPIDETICKSWIERCARYDLLNKSISDLNLSERLCQLHFEDHCYDNTEMGLVLKQSARPSLFDHDMTQFGSQIDEERGISVHPQVATVHYGSLEDGVNVITFQVEMDKGGETERMHLDRQVVNCFKTMQGSGEMMEPYNIVVEEVQTMQVLNEWAAEVEQPATRKTVHMIDFPVCTTEDHDDGGNLPKIEGVGTVVRPADMSMHVMEFPVCRMDLMCRVCAEECHNLVPVFGEQGVAMDLPKKITWYLPIQVKQEDQLPLKLCSLCIAKLNSCHELVNMCVAADAKLRRLFCAEPSILRKPLLRPADDMSVQTESQGEIHVIWTLTCDAPCDTTISNEDTETDDSNEKSKNQMISLSDACNKTIGFKNGQLYEVRKVVDVYVESADETLDPSKRTTTKFRMEVCSDVKRTDAELKSKIDSVVRDMIQTTKEEVEVCVNEDNLDERPCDDNEEDKSAIKRVFSNKRKCPHKTSWQCKKCGHMTRRKGSLIMHQRQKHKPDEFACCYCDRQFHNAIALSAHKRYHNKKLKQPNECERPSYVCEHCGKSFQTKKTLKEHYFANHSVEKPFQCKKCHKTYGSSVSLDIHMATHSKETPLLCDLCGKSFKHLSNLRSHKRSHLDSSRKNRQVCDLCGKGFRSRFHLSEHMNIHNGLRPYPCPVCSKSFAKKIQLRQHSSAHLGTQPFKCPTCGVAFNRRGNMTQHLKRHEQERKYVCRVCLMEFLSLGAVLAHRKKHTQEEVEQSLRQKVGDDLEEHAFKCKVCGKFLAKKDTLEIHMRSHSGEKLFGCLVCGKRLSNKGSLNYHMRAFHTGERPHSCQYCGEGFLSREACMVHERIHTGEKPFKCEMCTMAFRCTSNLTQHMRVHSTERPYVCQTCGKRFPRKGTLDVHMRIHTGERPFNCNICGRGFTQKNDMLKHKRTHVGGAERPWPCAMCGEQLMSRTQLLEHEAVQHMMVHGRPIIPELIHVEVPVAGVPTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445856;
90% Identity: iTF_01449822;
80% Identity: iTF_01449822;