Tpod006538.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- dnajc2
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000002.1:28638302-28645513[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-06 0.034 16.0 0.0 3 40 505 548 504 559 0.85 2 2 1.3e-13 4.8e-10 41.2 0.1 2 44 611 657 610 659 0.90
Sequence Information
- Coding Sequence
- ATGCTGCTATCTAGTGTCTGGTACAGCAAACTGCACGACGATCAGCGGAAGTTAATCAACGGGTTTATTCTTTTCAGCGGAGTGTTTGACTTAAAGCCAATAGTTAACACATACATCAACGATGCACTAAGTTTATCACAGAGTGATGCGAGATTGCTTAGTCCGATGTTTCTTGATGTAAAGCAGTCCGGTTGTGAGAAACTTCCCAAGATACTTGTGGTGGTAGGTCAGTACGACTCTCCTGCGTTTCAAGAACAATCCAAGCAACGAGTTGTAGAATGCATAGGTCCAGCGTTTCTTAGTTTTTGGCAAAGTCAGCCTGGTGTCACAACTGATGTTTTAACTCTTCAAGAAGACGACGTCTTAGAAGATGAAAAAAGCTCAATATTTGACGAAGATAATGTTAGCTTTCTTAGAAGCCTTGATCCTAAAGAATGGAAGGATCAAGATCATTATGCAGTTCTTGGACTCTCCAAACTACGCCACAAAGCCACAGATGATGACATAAAGAGAGCCTATCGTATTAAGGTGCTGCATCATCACCCTGATAAACGCAAAGGTAAAGGGGAAGAAATTCGCCCGGATGACGACTATTTTACTTGCATTACAAAAGCTTGGGAGGTGTTGGGAAATCCTCGAAACCGTCGCTCATATGATTCTATTGATCCGCTCTTTGATGATTCAATACCAACGGCCAGtaaaaagtcaactttttttgaaacttttggTAAAACATTTGAAGAAAACGCTCGTTGGTCAGAACGACAGCCTGTCCCTAAGCTCGGAGGAGCACTGTCACCTCGTGAACAAGTTGATAGGTTTTATTCCTTCTGGTACAACTTTGAGTCGTGGAGGGAATACTCATATTTAGATGAAGAAGAAACAGAGAAGGGTCAATCTCGTGAAGAAAGAAGATGGATTGAAAAACAGAACAAGGTAACACGAGCGAGGAGGAAGAAGGAAGAAATGGCGAGGATTCGAACTTTAGTAGACACTGCATATGAGCTAGATCCTAGAGTTCTAAAGTTCAAACAAGATGAAAAGGATCGGAAGTTGGCTATGAAGCAGGCCAAGAAAGACGCTATACGTGCTCGTTTTGAAGAAGAGGAGCGAAAAGTCCAAGAGGCCGAAGAGGCAGCACGCAAACTCAAAGAGCAGGCAGATGCCGAAGAGAAAGCCAAGCAAGATGCTTTAAGAGCAGAAAGGGAGGCTCAGAAAAAAGCTctgaagaaagaaaaaaccaACTTGCGCAAGCTAGTGAAAGCCAATAGTTACTATGTAACCAACGATTCAGAAATGATCAAACATATggaaagtttagaaaaaatttgtGAGAGTATGGACATTGACGGCATCATCAAACTTGTTAGTGATTTGTCTCTAAATGGTCGTGAAGACTATATCAAGGCAATAACAGAAGCAGAACAACGAATTGAGCAAGAACGTCAGGAGCTTATGGAAGTGGCCAAGCGCAGTAGTTCAAATCAAGGCCAAGGTAAAGGGAATTTAGCACCGTGGTCATCTGAACAACTTCAACTGCTCATCAAAGCAGTTAACATCTATCCAGCCGGAACCAGCCAAAGATGGGATGTGGTAGCAAATTTTATAAACCAACATAATGCTTCAGGAAATGTGATAAGGTCTGCAAAAGAAGTACTAGCTAAAGCTAAAAATCTTAAGAGCTCAGACTATTCGAAGAATGTTTTGAAAGTAGCTGCTAATGAAAAAGCTtatgataattttgaaaaagaacACAAAAGTAATGTTGACATTGATGCGACCACCTCACAGAGGTTTGATAACCCAGCAGAACAACAAGGTTACTCGACAACACCATGGACTGCGAAGGAACAACAGCTTTTGGAGCAAGCACTCAAGACGTATCCCGCCTCAACAGCGGAACGTTGGGATAAGATAGCCGAGTGTGTACCATCACGCTCCAAGAAAGACTGCATCAAACGTTACAAAGAGTTGGTGGAATTAGTGAAGGCAAAGAAGGCTGCCCAGGCTGCAACAACAGCTGCAAACAagactaaataa
- Protein Sequence
- MLLSSVWYSKLHDDQRKLINGFILFSGVFDLKPIVNTYINDALSLSQSDARLLSPMFLDVKQSGCEKLPKILVVVGQYDSPAFQEQSKQRVVECIGPAFLSFWQSQPGVTTDVLTLQEDDVLEDEKSSIFDEDNVSFLRSLDPKEWKDQDHYAVLGLSKLRHKATDDDIKRAYRIKVLHHHPDKRKGKGEEIRPDDDYFTCITKAWEVLGNPRNRRSYDSIDPLFDDSIPTASKKSTFFETFGKTFEENARWSERQPVPKLGGALSPREQVDRFYSFWYNFESWREYSYLDEEETEKGQSREERRWIEKQNKVTRARRKKEEMARIRTLVDTAYELDPRVLKFKQDEKDRKLAMKQAKKDAIRARFEEEERKVQEAEEAARKLKEQADAEEKAKQDALRAEREAQKKALKKEKTNLRKLVKANSYYVTNDSEMIKHMESLEKICESMDIDGIIKLVSDLSLNGREDYIKAITEAEQRIEQERQELMEVAKRSSSNQGQGKGNLAPWSSEQLQLLIKAVNIYPAGTSQRWDVVANFINQHNASGNVIRSAKEVLAKAKNLKSSDYSKNVLKVAANEKAYDNFEKEHKSNVDIDATTSQRFDNPAEQQGYSTTPWTAKEQQLLEQALKTYPASTAERWDKIAECVPSRSKKDCIKRYKELVELVKAKKAAQAATTAANKTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448500; iTF_01446533; iTF_01444712; iTF_01447504;
- 90% Identity
- iTF_01447504;
- 80% Identity
- -